RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 TRAV12-3A0A0B4J271 114 aa8.11□□□□□ -1.11
CCL3L3-201ENST00000612839 A0A1W2PRE2 83 aa8.11□□□□□ -1.11
CCL3L3-201ENST00000612839 TMEM189A5PLL7 270 aa8.11□□□□□ -1.11
CCL3L3-201ENST00000612839 CXorf65A6NEN9 183 aa8.11□□□□□ -1.11
CCL3L3-201ENST00000612839 TEX46H3BTG2 121 aa8.11□□□□□ -1.11
CCL3L3-201ENST00000612839 H7BYZ3 331 aa8.11□□□□□ -1.11
CCL3L3-201ENST00000612839 AZU1P20160 251 aa8.11□□□□□ -1.11
CCL3L3-201ENST00000612839 RAB5CP51148 216 aa8.11□□□□□ -1.11
CCL3L3-201ENST00000612839 EMP1P54849 157 aa8.11□□□□□ -1.11
CCL3L3-201ENST00000612839 TAS2R60P59551 318 aa8.11□□□□□ -1.11
CCL3L3-201ENST00000612839 SUMO1P63165 101 aaKnown RBP8.11□□□□□ -1.11
CCL3L3-201ENST00000612839 BTN1A1Q13410 526 aa8.11□□□□□ -1.11
CCL3L3-201ENST00000612839 PRR9Q5T870 116 aa8.11□□□□□ -1.11
CCL3L3-201ENST00000612839 GOLT1AQ6ZVE7 132 aa8.11□□□□□ -1.11
CCL3L3-201ENST00000612839 C5orf17Q8NAS9 161 aa8.11□□□□□ -1.11
CCL3L3-201ENST00000612839 FAM213BQ8TBF2 198 aa8.11□□□□□ -1.11
CCL3L3-201ENST00000612839 YTHDF2Q9Y5A9 579 aaKnown RBP8.11□□□□□ -1.11
CCL3L3-201ENST00000612839 TRBV7-9A0A0J9YWB2 115 aa8.1□□□□□ -1.11
CCL3L3-201ENST00000612839 PLAC8L1A1L4L8 177 aa8.1□□□□□ -1.11
CCL3L3-201ENST00000612839 C7orf71A4D174 169 aa8.1□□□□□ -1.11
CCL3L3-201ENST00000612839 ZNF324O75467 553 aaPredicted RBP8.1□□□□□ -1.11
CCL3L3-201ENST00000612839 TCRAP04437 139 aa8.1□□□□□ -1.11
CCL3L3-201ENST00000612839 GPX1P07203 203 aa8.1□□□□□ -1.11
CCL3L3-201ENST00000612839 HTN1P15515 57 aa8.1□□□□□ -1.11
CCL3L3-201ENST00000612839 UBE2G2P60604 165 aa8.1□□□□□ -1.11
CCL3L3-201ENST00000612839 BLOC1S1P78537 153 aa8.1□□□□□ -1.11
CCL3L3-201ENST00000612839 DPPA3Q6W0C5 159 aa8.1□□□□□ -1.11
CCL3L3-201ENST00000612839 LYPD6BQ8NI32 183 aa8.1□□□□□ -1.11
CCL3L3-201ENST00000612839 MBD3L1Q8WWY6 194 aa8.1□□□□□ -1.11
CCL3L3-201ENST00000612839 KMT2CQ8NEZ4 4911 aaKnown RBP8.1□□□□□ -1.11
CCL3L3-201ENST00000612839 TRAV8-1A0A0A6YYK1 113 aa8.09□□□□□ -1.11
CCL3L3-201ENST00000612839 FAM74A7A6NL05 159 aa8.09□□□□□ -1.11
CCL3L3-201ENST00000612839 RNASE4P34096 147 aaKnown RBP8.09□□□□□ -1.11
CCL3L3-201ENST00000612839 C12orf74Q32Q52 190 aa8.09□□□□□ -1.11
CCL3L3-201ENST00000612839 Q6ZQT7 251 aa8.09□□□□□ -1.11
CCL3L3-201ENST00000612839 Q6ZTC4 211 aa8.09□□□□□ -1.11
CCL3L3-201ENST00000612839 SFT2D1Q8WV19 159 aa8.09□□□□□ -1.11
CCL3L3-201ENST00000612839 PHLDA1Q8WV24 401 aaPredicted RBP8.09□□□□□ -1.11
CCL3L3-201ENST00000612839 NIPSNAP3BQ9BS92 247 aa8.09□□□□□ -1.11
CCL3L3-201ENST00000612839 MRPL18Q9H0U6 180 aaKnown RBP8.09□□□□□ -1.11
CCL3L3-201ENST00000612839 DKK2Q9UBU2 259 aa8.09□□□□□ -1.11
CCL3L3-201ENST00000612839 EPDR1Q9UM22 224 aa8.09□□□□□ -1.11
CCL3L3-201ENST00000612839 LENEPQ9Y5L5 61 aa8.09□□□□□ -1.11
CCL3L3-201ENST00000612839 SERTM2A0A1B0GWG4 89 aa8.08□□□□□ -1.12
CCL3L3-201ENST00000612839 NUPR2A6NF83 97 aa8.08□□□□□ -1.12
CCL3L3-201ENST00000612839 SPART-AS1P0CW21 52 aa8.08□□□□□ -1.12
CCL3L3-201ENST00000612839 FAM222AQ5U5X8 452 aa8.08□□□□□ -1.12
CCL3L3-201ENST00000612839 CEMP1Q6PRD7 247 aaPredicted RBP8.08□□□□□ -1.12
CCL3L3-201ENST00000612839 RNASE8Q8TDE3 154 aaKnown RBP8.08□□□□□ -1.12
CCL3L3-201ENST00000612839 TMEM263Q8WUH6 116 aaKnown RBP8.08□□□□□ -1.12
CCL3L3-201ENST00000612839 TVP23CQ96ET8 276 aa8.08□□□□□ -1.12
CCL3L3-201ENST00000612839 SGK494Q96LW2 274 aa8.08□□□□□ -1.12
CCL3L3-201ENST00000612839 PYGO2Q9BRQ0 406 aa8.08□□□□□ -1.12
CCL3L3-201ENST00000612839 A0A1B0GV50 99 aa8.07□□□□□ -1.12
CCL3L3-201ENST00000612839 IGLV2-11P01706 119 aa8.07□□□□□ -1.12
CCL3L3-201ENST00000612839 CCDC28AQ8IWP9 274 aa8.07□□□□□ -1.12
CCL3L3-201ENST00000612839 EIF4E3Q8N5X7 224 aaKnown RBP8.07□□□□□ -1.12
CCL3L3-201ENST00000612839 C16orf74Q96GX8 76 aa8.07□□□□□ -1.12
CCL3L3-201ENST00000612839 ATG101Q9BSB4 218 aa8.07□□□□□ -1.12
CCL3L3-201ENST00000612839 TENM2Q9NT68 2774 aa8.07□□□□□ -1.12
CCL3L3-201ENST00000612839 ZNF493Q6ZR52 646 aa8.06□□□□□ -1.12
CCL3L3-201ENST00000612839 CYB561D1Q8N8Q1 229 aa8.06□□□□□ -1.12
CCL3L3-201ENST00000612839 LINC00467Q9BRT7 94 aa8.06□□□□□ -1.12
CCL3L3-201ENST00000612839 NKX6-2Q9C056 277 aaPredicted RBP8.06□□□□□ -1.12
CCL3L3-201ENST00000612839 DYNC2H1Q8NCM8 4307 aaKnown RBP8.06□□□□□ -1.12
CCL3L3-201ENST00000612839 TEX48A0A1B0GUV7 120 aa8.06□□□□□ -1.12
CCL3L3-201ENST00000612839 RAB19A4D1S5 217 aa8.06□□□□□ -1.12
CCL3L3-201ENST00000612839 C11orf94C9JXX5 98 aa8.06□□□□□ -1.12
CCL3L3-201ENST00000612839 K7EQM0 130 aa8.06□□□□□ -1.12
CCL3L3-201ENST00000612839 PAGE4O60829 102 aa8.06□□□□□ -1.12
CCL3L3-201ENST00000612839 S100A1P23297 94 aa8.06□□□□□ -1.12
CCL3L3-201ENST00000612839 ATP5G3P48201 142 aa8.06□□□□□ -1.12
CCL3L3-201ENST00000612839 Q6AWC8 147 aa8.06□□□□□ -1.12
CCL3L3-201ENST00000612839 TMEM75Q8N9X5 138 aa8.06□□□□□ -1.12
CCL3L3-201ENST00000612839 LINC00479Q96M42 142 aa8.06□□□□□ -1.12
CCL3L3-201ENST00000612839 TREM1Q9NP99 234 aa8.06□□□□□ -1.12
CCL3L3-201ENST00000612839 PSG8Q9UQ74 426 aa8.06□□□□□ -1.12
CCL3L3-201ENST00000612839 ARL2-SNX15V9GYD0 113 aa8.06□□□□□ -1.12
CCL3L3-201ENST00000612839 PLECQ15149 4684 aaKnown RBP8.05□□□□□ -1.12
CCL3L3-201ENST00000612839 TRAV1-1A0A0B4J248 108 aa8.05□□□□□ -1.12
CCL3L3-201ENST00000612839 LYRM9A8MSI8 78 aa8.05□□□□□ -1.12
CCL3L3-201ENST00000612839 F6UZH7 168 aa8.05□□□□□ -1.12
CCL3L3-201ENST00000612839 PEX7O00628 323 aa8.05□□□□□ -1.12
CCL3L3-201ENST00000612839 CCL20P78556 96 aa8.05□□□□□ -1.12
CCL3L3-201ENST00000612839 FLI1Q01543 452 aaPredicted RBP8.05□□□□□ -1.12
CCL3L3-201ENST00000612839 CST9LP1Q5W188 147 aa8.05□□□□□ -1.12
CCL3L3-201ENST00000612839 C11orf72Q8NBR9 251 aa8.05□□□□□ -1.12
CCL3L3-201ENST00000612839 HIST1H2BAQ96A08 127 aa8.05□□□□□ -1.12
CCL3L3-201ENST00000612839 KLK5Q9Y337 293 aaPredicted RBP8.05□□□□□ -1.12
CCL3L3-201ENST00000612839 TIMM8BQ9Y5J9 83 aaPredicted RBP8.05□□□□□ -1.12
CCL3L3-201ENST00000612839 IGHV1OR15-1A0A075B7D0 117 aa8.04□□□□□ -1.12
CCL3L3-201ENST00000612839 TRAV10A0A0B4J240 114 aa8.04□□□□□ -1.12
CCL3L3-201ENST00000612839 TRAV34A0A0B4J273 112 aa8.04□□□□□ -1.12
CCL3L3-201ENST00000612839 CBY3A6NI87 242 aa8.04□□□□□ -1.12
CCL3L3-201ENST00000612839 SRSF3P84103 164 aaKnown RBP8.04□□□□□ -1.12
CCL3L3-201ENST00000612839 ANXA2RQ3ZCQ2 193 aa8.04□□□□□ -1.12
CCL3L3-201ENST00000612839 PRNTQ86SH4 94 aa8.04□□□□□ -1.12
CCL3L3-201ENST00000612839 C8orf49Q96NF6 230 aa8.04□□□□□ -1.12
CCL3L3-201ENST00000612839 NOP10Q9NPE3 64 aaKnown RBP8.04□□□□□ -1.12
CCL3L3-201ENST00000612839 TP53TG3Q9ULZ0 132 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms