RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 SERTM2A0A1B0GWG4 89 aa12.78□□□□□ -0.36
SEMA3B-211ENST00000612509 MAP1LC3B2A6NCE7 125 aa12.78□□□□□ -0.36
SEMA3B-211ENST00000612509 CBY3A6NI87 242 aa12.78□□□□□ -0.36
SEMA3B-211ENST00000612509 RGS13O14921 159 aa12.78□□□□□ -0.36
SEMA3B-211ENST00000612509 TCRAP04437 139 aa12.78□□□□□ -0.36
SEMA3B-211ENST00000612509 FGF8P55075 233 aaPredicted RBP12.78□□□□□ -0.36
SEMA3B-211ENST00000612509 ANXA2RQ3ZCQ2 193 aa12.78□□□□□ -0.36
SEMA3B-211ENST00000612509 TCTE3Q8IZS6 198 aa12.78□□□□□ -0.36
SEMA3B-211ENST00000612509 LINC00612Q8N6U2 182 aa12.78□□□□□ -0.36
SEMA3B-211ENST00000612509 C11orf72Q8NBR9 251 aa12.78□□□□□ -0.36
SEMA3B-211ENST00000612509 FAM210BQ96KR6 192 aa12.78□□□□□ -0.36
SEMA3B-211ENST00000612509 MAP1LC3BQ9GZQ8 125 aa12.78□□□□□ -0.36
SEMA3B-211ENST00000612509 KMT2AQ03164 3969 aa12.78□□□□□ -0.36
SEMA3B-211ENST00000612509 IGHV1OR15-1A0A075B7D0 117 aa12.77□□□□□ -0.37
SEMA3B-211ENST00000612509 A0A1W2PRE2 83 aa12.77□□□□□ -0.37
SEMA3B-211ENST00000612509 PFDN1O60925 122 aa12.77□□□□□ -0.37
SEMA3B-211ENST00000612509 Q6AWC8 147 aa12.77□□□□□ -0.37
SEMA3B-211ENST00000612509 TMPRSS5Q9H3S3 457 aa12.77□□□□□ -0.37
SEMA3B-211ENST00000612509 DNAH6Q9C0G6 4158 aa12.77□□□□□ -0.37
SEMA3B-211ENST00000612509 ATP5G1P05496 136 aa12.76□□□□□ -0.37
SEMA3B-211ENST00000612509 SEC11BP0C7V7 166 aa12.76□□□□□ -0.37
SEMA3B-211ENST00000612509 ATP5G3P48201 142 aa12.76□□□□□ -0.37
SEMA3B-211ENST00000612509 SUMO1P63165 101 aaKnown RBP12.76□□□□□ -0.37
SEMA3B-211ENST00000612509 TMEM88Q6PEY1 159 aa12.76□□□□□ -0.37
SEMA3B-211ENST00000612509 TMUB2Q71RG4 321 aa12.76□□□□□ -0.37
SEMA3B-211ENST00000612509 GSN-AS1Q9NRJ2 163 aa12.76□□□□□ -0.37
SEMA3B-211ENST00000612509 F6UZH7 168 aa12.75□□□□□ -0.37
SEMA3B-211ENST00000612509 FHITP49789 147 aa12.75□□□□□ -0.37
SEMA3B-211ENST00000612509 TCL1AP56279 114 aa12.75□□□□□ -0.37
SEMA3B-211ENST00000612509 UBE2G2P60604 165 aa12.75□□□□□ -0.37
SEMA3B-211ENST00000612509 EIF5AP63241 154 aaKnown RBP12.75□□□□□ -0.37
SEMA3B-211ENST00000612509 DAZ2Q13117 558 aaKnown RBP12.75□□□□□ -0.37
SEMA3B-211ENST00000612509 IBA57Q5T440 356 aaKnown RBP12.75□□□□□ -0.37
SEMA3B-211ENST00000612509 CYB561D1Q8N8Q1 229 aa12.75□□□□□ -0.37
SEMA3B-211ENST00000612509 SGK494Q96LW2 274 aa12.75□□□□□ -0.37
SEMA3B-211ENST00000612509 TP53TG3Q9ULZ0 132 aa12.75□□□□□ -0.37
SEMA3B-211ENST00000612509 hCG_2014768A0A024R1R8 64 aa12.74□□□□□ -0.37
SEMA3B-211ENST00000612509 GAGE12BA1L429 117 aa12.74□□□□□ -0.37
SEMA3B-211ENST00000612509 F5H768 121 aa12.74□□□□□ -0.37
SEMA3B-211ENST00000612509 K7EQM0 130 aa12.74□□□□□ -0.37
SEMA3B-211ENST00000612509 GAGE7O76087 117 aa12.74□□□□□ -0.37
SEMA3B-211ENST00000612509 GAGE12FP0CL80 117 aa12.74□□□□□ -0.37
SEMA3B-211ENST00000612509 GAGE12GP0CL81 117 aa12.74□□□□□ -0.37
SEMA3B-211ENST00000612509 GAGE12IP0CL82 117 aa12.74□□□□□ -0.37
SEMA3B-211ENST00000612509 MUC21Q5SSG8 566 aa12.74□□□□□ -0.37
SEMA3B-211ENST00000612509 TVP23CQ96ET8 276 aa12.74□□□□□ -0.37
SEMA3B-211ENST00000612509 ATG101Q9BSB4 218 aa12.74□□□□□ -0.37
SEMA3B-211ENST00000612509 NDFIP1Q9BT67 221 aa12.74□□□□□ -0.37
SEMA3B-211ENST00000612509 TREM1Q9NP99 234 aa12.74□□□□□ -0.37
SEMA3B-211ENST00000612509 EPDR1Q9UM22 224 aa12.74□□□□□ -0.37
SEMA3B-211ENST00000612509 FAM74A7A6NL05 159 aa12.73□□□□□ -0.37
SEMA3B-211ENST00000612509 UMAD1C9J7I0 102 aa12.73□□□□□ -0.37
SEMA3B-211ENST00000612509 TPT1P13693 172 aaKnown RBP12.73□□□□□ -0.37
SEMA3B-211ENST00000612509 Q6ZTI0 123 aa12.73□□□□□ -0.37
SEMA3B-211ENST00000612509 TMEM75Q8N9X5 138 aa12.73□□□□□ -0.37
SEMA3B-211ENST00000612509 STOML3Q8TAV4 291 aa12.73□□□□□ -0.37
SEMA3B-211ENST00000612509 IGLV2-11P01706 119 aa12.72□□□□□ -0.37
SEMA3B-211ENST00000612509 C1QBP02746 253 aa12.72□□□□□ -0.37
SEMA3B-211ENST00000612509 ZNF415Q09FC8 603 aa12.72□□□□□ -0.37
SEMA3B-211ENST00000612509 FAM213BQ8TBF2 198 aa12.72□□□□□ -0.37
SEMA3B-211ENST00000612509 NAGKQ9UJ70 344 aa12.72□□□□□ -0.37
SEMA3B-211ENST00000612509 PSG8Q9UQ74 426 aa12.72□□□□□ -0.37
SEMA3B-211ENST00000612509 KLF12Q9Y4X4 402 aa12.72□□□□□ -0.37
SEMA3B-211ENST00000612509 TRGV1A0A0A0MS02 117 aa12.71□□□□□ -0.37
SEMA3B-211ENST00000612509 TRAV21A0A0B4J279 112 aa12.71□□□□□ -0.37
SEMA3B-211ENST00000612509 P0DMU3 169 aa12.71□□□□□ -0.37
SEMA3B-211ENST00000612509 FAM231AP0DMU4 169 aa12.71□□□□□ -0.37
SEMA3B-211ENST00000612509 FAM231CP0DMU5 169 aa12.71□□□□□ -0.37
SEMA3B-211ENST00000612509 FLI1Q01543 452 aaPredicted RBP12.71□□□□□ -0.37
SEMA3B-211ENST00000612509 AKAP14Q86UN6 197 aa12.71□□□□□ -0.37
SEMA3B-211ENST00000612509 C15orf53Q8NAA6 179 aa12.71□□□□□ -0.37
SEMA3B-211ENST00000612509 NKX6-2Q9C056 277 aaPredicted RBP12.71□□□□□ -0.37
SEMA3B-211ENST00000612509 FBLL1A6NHQ2 334 aaKnown RBP12.7□□□□□ -0.38
SEMA3B-211ENST00000612509 PEX7O00628 323 aa12.7□□□□□ -0.38
SEMA3B-211ENST00000612509 SPINK4O60575 86 aa12.7□□□□□ -0.38
SEMA3B-211ENST00000612509 IFNA7P01567 189 aa12.7□□□□□ -0.38
SEMA3B-211ENST00000612509 LGALSLQ3ZCW2 172 aaPredicted RBP12.7□□□□□ -0.38
SEMA3B-211ENST00000612509 FAM159AQ6UWV7 190 aa12.7□□□□□ -0.38
SEMA3B-211ENST00000612509 DPPA3Q6W0C5 159 aa12.7□□□□□ -0.38
SEMA3B-211ENST00000612509 PRNTQ86SH4 94 aa12.7□□□□□ -0.38
SEMA3B-211ENST00000612509 C8orf49Q96NF6 230 aa12.7□□□□□ -0.38
SEMA3B-211ENST00000612509 TRGV11A0A075B6L2 103 aa12.69□□□□□ -0.38
SEMA3B-211ENST00000612509 TMEM183BQ1AE95 376 aa12.69□□□□□ -0.38
SEMA3B-211ENST00000612509 TDRG1Q3Y452 100 aa12.69□□□□□ -0.38
SEMA3B-211ENST00000612509 TMEM183AQ8IXX5 376 aa12.69□□□□□ -0.38
SEMA3B-211ENST00000612509 MBD3L1Q8WWY6 194 aa12.69□□□□□ -0.38
SEMA3B-211ENST00000612509 C18orf15Q96N68 181 aa12.69□□□□□ -0.38
SEMA3B-211ENST00000612509 ARL2-SNX15V9GYD0 113 aa12.69□□□□□ -0.38
SEMA3B-211ENST00000612509 TRGV2A0A075B6R0 118 aa12.68□□□□□ -0.38
SEMA3B-211ENST00000612509 ZFP69Q49AA0 526 aa12.68□□□□□ -0.38
SEMA3B-211ENST00000612509 Q86TA4 180 aa12.68□□□□□ -0.38
SEMA3B-211ENST00000612509 SFT2D1Q8WV19 159 aa12.68□□□□□ -0.38
SEMA3B-211ENST00000612509 HIST1H2BAQ96A08 127 aa12.68□□□□□ -0.38
SEMA3B-211ENST00000612509 LINC00479Q96M42 142 aa12.68□□□□□ -0.38
SEMA3B-211ENST00000612509 MRPL16Q9NX20 251 aaKnown RBP12.68□□□□□ -0.38
SEMA3B-211ENST00000612509 MDFICQ9P1T7 246 aa12.68□□□□□ -0.38
SEMA3B-211ENST00000612509 TRAV34A0A0B4J273 112 aa12.67□□□□□ -0.38
SEMA3B-211ENST00000612509 A0A1B0GV50 99 aa12.67□□□□□ -0.38
SEMA3B-211ENST00000612509 GCGP01275 180 aa12.67□□□□□ -0.38
SEMA3B-211ENST00000612509 HOXA5P20719 270 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms