RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 FAM19A4Q96LR4 140 aa9.19□□□□□ -0.94
CBWD1-220ENST00000612045 GFRA4Q9GZZ7 299 aa9.19□□□□□ -0.94
CBWD1-220ENST00000612045 TRAV25A0A0B4J276 109 aa9.19□□□□□ -0.94
CBWD1-220ENST00000612045 FAM231BA6NCW3 169 aa9.19□□□□□ -0.94
CBWD1-220ENST00000612045 FABP5P3A8MUU1 101 aa9.19□□□□□ -0.94
CBWD1-220ENST00000612045 SPINK4O60575 86 aa9.19□□□□□ -0.94
CBWD1-220ENST00000612045 TRGC2P03986 189 aa9.19□□□□□ -0.94
CBWD1-220ENST00000612045 GZMBP10144 247 aa9.19□□□□□ -0.94
CBWD1-220ENST00000612045 RAB5BP61020 215 aa9.19□□□□□ -0.94
CBWD1-220ENST00000612045 ZFP82Q8N141 532 aa9.19□□□□□ -0.94
CBWD1-220ENST00000612045 TRBV7-9A0A0J9YWB2 115 aa9.18□□□□□ -0.94
CBWD1-220ENST00000612045 A0A0J9YX75 114 aa9.18□□□□□ -0.94
CBWD1-220ENST00000612045 TMEM189A5PLL7 270 aa9.18□□□□□ -0.94
CBWD1-220ENST00000612045 CD33P20138 364 aa9.18□□□□□ -0.94
CBWD1-220ENST00000612045 ZFAND2AQ8N6M9 145 aa9.18□□□□□ -0.94
CBWD1-220ENST00000612045 SPAG8Q99932 426 aaPredicted RBP9.18□□□□□ -0.94
CBWD1-220ENST00000612045 CITED1Q99966 193 aa9.18□□□□□ -0.94
CBWD1-220ENST00000612045 TRRAPQ9Y4A5 3859 aa9.17□□□□□ -0.94
CBWD1-220ENST00000612045 SAP30O75446 220 aa9.17□□□□□ -0.94
CBWD1-220ENST00000612045 PF4P02776 101 aa9.17□□□□□ -0.94
CBWD1-220ENST00000612045 FRMD6-AS1P0C7T7 363 aa9.17□□□□□ -0.94
CBWD1-220ENST00000612045 FOXA3P55318 350 aaPredicted RBP9.17□□□□□ -0.94
CBWD1-220ENST00000612045 PRR9Q5T870 116 aa9.17□□□□□ -0.94
CBWD1-220ENST00000612045 MRPL54Q6P161 138 aaKnown RBP9.17□□□□□ -0.94
CBWD1-220ENST00000612045 EBLN2Q6P2I7 272 aa9.17□□□□□ -0.94
CBWD1-220ENST00000612045 FOXI2Q6ZQN5 318 aa9.17□□□□□ -0.94
CBWD1-220ENST00000612045 TMSB15BA0A087X1C1 80 aa9.17□□□□□ -0.94
CBWD1-220ENST00000612045 OR4C46A6NHA9 309 aa9.17□□□□□ -0.94
CBWD1-220ENST00000612045 PHOX2AO14813 284 aa9.17□□□□□ -0.94
CBWD1-220ENST00000612045 CRISP2P16562 243 aa9.17□□□□□ -0.94
CBWD1-220ENST00000612045 SAV1Q9H4B6 383 aaPredicted RBP9.17□□□□□ -0.94
CBWD1-220ENST00000612045 ZNF256Q9Y2P7 627 aaPredicted RBP9.17□□□□□ -0.94
CBWD1-220ENST00000612045 XKRY2A2RUG3 117 aa9.16□□□□□ -0.94
CBWD1-220ENST00000612045 J3KRW8 73 aa9.16□□□□□ -0.94
CBWD1-220ENST00000612045 ORM1P02763 201 aa9.16□□□□□ -0.94
CBWD1-220ENST00000612045 GPX1P07203 203 aa9.16□□□□□ -0.94
CBWD1-220ENST00000612045 DEFB131AP59861 70 aa9.16□□□□□ -0.94
CBWD1-220ENST00000612045 LINC01559Q495D7 138 aa9.16□□□□□ -0.94
CBWD1-220ENST00000612045 ACTL10Q5JWF8 245 aa9.16□□□□□ -0.94
CBWD1-220ENST00000612045 APRG1Q8IVJ8 170 aa9.16□□□□□ -0.94
CBWD1-220ENST00000612045 LINC00482Q8N8I6 264 aa9.16□□□□□ -0.94
CBWD1-220ENST00000612045 PGLYRP4Q96LB8 373 aa9.16□□□□□ -0.94
CBWD1-220ENST00000612045 VWFP04275 2813 aa9.16□□□□□ -0.94
CBWD1-220ENST00000612045 DUSP14O95147 198 aaKnown RBP9.15□□□□□ -0.94
CBWD1-220ENST00000612045 RPS20P60866 119 aaKnown RBP9.15□□□□□ -0.94
CBWD1-220ENST00000612045 Q6ZQT7 251 aa9.15□□□□□ -0.94
CBWD1-220ENST00000612045 ATP5L2Q7Z4Y8 100 aa9.15□□□□□ -0.94
CBWD1-220ENST00000612045 ZNF575Q86XF7 245 aa9.15□□□□□ -0.94
CBWD1-220ENST00000612045 FRZBQ92765 325 aa9.15□□□□□ -0.94
CBWD1-220ENST00000612045 ODF3Q96PU9 254 aa9.15□□□□□ -0.94
CBWD1-220ENST00000612045 MAP6D1Q9H9H5 199 aa9.15□□□□□ -0.94
CBWD1-220ENST00000612045 C11orf21Q9P2W6 132 aa9.15□□□□□ -0.94
CBWD1-220ENST00000612045 TRAPPC1Q9Y5R8 145 aa9.15□□□□□ -0.94
CBWD1-220ENST00000612045 IGKV3D-20A0A0C4DH25 116 aa9.15□□□□□ -0.95
CBWD1-220ENST00000612045 IGLV1-51P01701 117 aa9.15□□□□□ -0.95
CBWD1-220ENST00000612045 FABP9Q0Z7S8 132 aa9.15□□□□□ -0.95
CBWD1-220ENST00000612045 KIR3DS1Q14943 382 aa9.15□□□□□ -0.95
CBWD1-220ENST00000612045 GNB1LQ9BYB4 327 aa9.15□□□□□ -0.95
CBWD1-220ENST00000612045 AGRNO00468 2067 aa9.14□□□□□ -0.95
CBWD1-220ENST00000612045 TRAV21A0A0B4J279 112 aa9.14□□□□□ -0.95
CBWD1-220ENST00000612045 SNURFLB1AK76 121 aa9.14□□□□□ -0.95
CBWD1-220ENST00000612045 KLLNB2CW77 178 aa9.14□□□□□ -0.95
CBWD1-220ENST00000612045 IGKV3-20P01619 116 aa9.14□□□□□ -0.95
CBWD1-220ENST00000612045 RNASE4P34096 147 aaKnown RBP9.14□□□□□ -0.95
CBWD1-220ENST00000612045 KRTAP24-1Q3LI83 254 aa9.14□□□□□ -0.95
CBWD1-220ENST00000612045 COX19Q49B96 90 aa9.14□□□□□ -0.95
CBWD1-220ENST00000612045 Q6AWC8 147 aa9.14□□□□□ -0.95
CBWD1-220ENST00000612045 WDR73Q6P4I2 378 aa9.14□□□□□ -0.95
CBWD1-220ENST00000612045 RASL11AQ6T310 242 aa9.14□□□□□ -0.95
CBWD1-220ENST00000612045 A0A1B0GXF2 115 aa9.13□□□□□ -0.95
CBWD1-220ENST00000612045 KNCNA6PVL3 124 aa9.13□□□□□ -0.95
CBWD1-220ENST00000612045 HIST1H2BKO60814 126 aa9.13□□□□□ -0.95
CBWD1-220ENST00000612045 HIST1H2BJP06899 126 aa9.13□□□□□ -0.95
CBWD1-220ENST00000612045 HLA-DRB4P13762 266 aa9.13□□□□□ -0.95
CBWD1-220ENST00000612045 HIST1H2BOP23527 126 aa9.13□□□□□ -0.95
CBWD1-220ENST00000612045 HIST1H2BBP33778 126 aa9.13□□□□□ -0.95
CBWD1-220ENST00000612045 LEPP41159 167 aa9.13□□□□□ -0.95
CBWD1-220ENST00000612045 HIST1H2BDP58876 126 aa9.13□□□□□ -0.95
CBWD1-220ENST00000612045 HIST1H2BCP62807 126 aa9.13□□□□□ -0.95
CBWD1-220ENST00000612045 ZNF124Q15973 351 aa9.13□□□□□ -0.95
CBWD1-220ENST00000612045 HIST2H2BEQ16778 126 aa9.13□□□□□ -0.95
CBWD1-220ENST00000612045 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.13□□□□□ -0.95
CBWD1-220ENST00000612045 TMEM136Q6ZRR5 245 aa9.13□□□□□ -0.95
CBWD1-220ENST00000612045 OR2K2Q8NGT1 345 aa9.13□□□□□ -0.95
CBWD1-220ENST00000612045 HIST1H2BHQ93079 126 aa9.13□□□□□ -0.95
CBWD1-220ENST00000612045 HIST1H2BNQ99877 126 aa9.13□□□□□ -0.95
CBWD1-220ENST00000612045 HIST1H2BMQ99879 126 aa9.13□□□□□ -0.95
CBWD1-220ENST00000612045 TPPP3Q9BW30 176 aa9.13□□□□□ -0.95
CBWD1-220ENST00000612045 HLA-DRB4X5D2U9 266 aa9.13□□□□□ -0.95
CBWD1-220ENST00000612045 FBN1P35555 2871 aaKnown RBP9.13□□□□□ -0.95
CBWD1-220ENST00000612045 MT-ND6P03923 174 aa9.12□□□□□ -0.95
CBWD1-220ENST00000612045 TRGC1P0CF51 173 aa9.12□□□□□ -0.95
CBWD1-220ENST00000612045 CAMPP49913 170 aa9.12□□□□□ -0.95
CBWD1-220ENST00000612045 RAB4BP61018 213 aa9.12□□□□□ -0.95
CBWD1-220ENST00000612045 ODF3L2Q3SX64 289 aa9.12□□□□□ -0.95
CBWD1-220ENST00000612045 MRPL18Q9H0U6 180 aaKnown RBP9.12□□□□□ -0.95
CBWD1-220ENST00000612045 A0A1B0GUT8 65 aa9.12□□□□□ -0.95
CBWD1-220ENST00000612045 GRIFINA4D1Z8 144 aa9.12□□□□□ -0.95
CBWD1-220ENST00000612045 H3BMM0 161 aa9.12□□□□□ -0.95
CBWD1-220ENST00000612045 ARMS2P0C7Q2 107 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms