RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 CYSLTR1Q9Y271 337 aa10.29□□□□□ -0.76
TCF3-220ENST00000611869 IGHV4-59P01825 116 aa10.29□□□□□ -0.76
TCF3-220ENST00000611869 STHQ8IWL8 128 aa10.29□□□□□ -0.76
TCF3-220ENST00000611869 KLHL30-AS1Q8NEE0 82 aa10.29□□□□□ -0.76
TCF3-220ENST00000611869 A0A087WWL8 130 aa10.28□□□□□ -0.76
TCF3-220ENST00000611869 NDUFA4O00483 81 aa10.28□□□□□ -0.76
TCF3-220ENST00000611869 Q96MF0 132 aa10.28□□□□□ -0.76
TCF3-220ENST00000611869 DPH3P1Q9H4G8 78 aa10.28□□□□□ -0.76
TCF3-220ENST00000611869 GEMIN7Q9H840 131 aaKnown RBP10.28□□□□□ -0.76
TCF3-220ENST00000611869 IGHV3-73A0A0B4J1V6 119 aa10.28□□□□□ -0.76
TCF3-220ENST00000611869 C19orf84I3L1E1 186 aa10.28□□□□□ -0.76
TCF3-220ENST00000611869 EMP1P54849 157 aa10.28□□□□□ -0.76
TCF3-220ENST00000611869 MRPL51Q4U2R6 128 aaKnown RBP10.28□□□□□ -0.76
TCF3-220ENST00000611869 PAPPA-AS1Q5QFB9 102 aa10.28□□□□□ -0.76
TCF3-220ENST00000611869 GTSCR1Q86UQ5 136 aa10.28□□□□□ -0.76
TCF3-220ENST00000611869 IGKCP01834 107 aa10.28□□□□□ -0.76
TCF3-220ENST00000611869 LRRK2Q5S007 2527 aa10.28□□□□□ -0.76
TCF3-220ENST00000611869 EGR2P11161 476 aaPredicted RBP10.27□□□□□ -0.76
TCF3-220ENST00000611869 DEFB112Q30KQ8 113 aa10.27□□□□□ -0.76
TCF3-220ENST00000611869 OR2K2Q8NGT1 345 aa10.27□□□□□ -0.76
TCF3-220ENST00000611869 FANCD2OSQ96PS1 177 aa10.27□□□□□ -0.76
TCF3-220ENST00000611869 AGPAT4-IT1Q9H0P7 198 aa10.27□□□□□ -0.76
TCF3-220ENST00000611869 A0A087X0K7 114 aa10.27□□□□□ -0.77
TCF3-220ENST00000611869 F6UB75 175 aa10.27□□□□□ -0.77
TCF3-220ENST00000611869 UBE2L6O14933 153 aa10.27□□□□□ -0.77
TCF3-220ENST00000611869 MPV17L2Q567V2 206 aa10.27□□□□□ -0.77
TCF3-220ENST00000611869 IGHV1-24A0A0C4DH33 117 aa10.27□□□□□ -0.77
TCF3-220ENST00000611869 C20orf144Q9BQM9 153 aa10.27□□□□□ -0.77
TCF3-220ENST00000611869 NACAE9PAV3 2078 aa10.27□□□□□ -0.77
TCF3-220ENST00000611869 SMIM13P0DJ93 91 aa10.27□□□□□ -0.77
TCF3-220ENST00000611869 CDSNQ15517 529 aa10.27□□□□□ -0.77
TCF3-220ENST00000611869 STPG4Q8N801 248 aa10.26□□□□□ -0.77
TCF3-220ENST00000611869 SIRPDQ9H106 197 aa10.26□□□□□ -0.77
TCF3-220ENST00000611869 MS4A6AQ9H2W1 248 aa10.26□□□□□ -0.77
TCF3-220ENST00000611869 K7ERU9 68 aa10.26□□□□□ -0.77
TCF3-220ENST00000611869 DEFB131AP59861 70 aa10.26□□□□□ -0.77
TCF3-220ENST00000611869 SPINK13Q1W4C9 94 aa10.26□□□□□ -0.77
TCF3-220ENST00000611869 C10orf105Q8TEF2 133 aa10.26□□□□□ -0.77
TCF3-220ENST00000611869 TRAV26-2A0A0B4J265 109 aa10.26□□□□□ -0.77
TCF3-220ENST00000611869 SNHG12Q9BXW3 62 aa10.26□□□□□ -0.77
TCF3-220ENST00000611869 NSUN5P1Q3KNT7 163 aa10.25□□□□□ -0.77
TCF3-220ENST00000611869 LY6G5BQ8NDX9 201 aa10.25□□□□□ -0.77
TCF3-220ENST00000611869 TRGV11A0A075B6L2 103 aa10.25□□□□□ -0.77
TCF3-220ENST00000611869 H3BUT2 72 aa10.25□□□□□ -0.77
TCF3-220ENST00000611869 C19orf54Q5BKX5 351 aa10.25□□□□□ -0.77
TCF3-220ENST00000611869 CHTOPQ9Y3Y2 248 aaKnown RBP10.25□□□□□ -0.77
TCF3-220ENST00000611869 TRGV2A0A075B6R0 118 aa10.25□□□□□ -0.77
TCF3-220ENST00000611869 SPRY2O43597 315 aa10.25□□□□□ -0.77
TCF3-220ENST00000611869 NPYP01303 97 aa10.25□□□□□ -0.77
TCF3-220ENST00000611869 CD300EQ496F6 205 aaPredicted RBP10.25□□□□□ -0.77
TCF3-220ENST00000611869 ZC2HC1BQ5TFG8 222 aa10.25□□□□□ -0.77
TCF3-220ENST00000611869 C2orf88Q9BSF0 95 aa10.25□□□□□ -0.77
TCF3-220ENST00000611869 NHP2Q9NX24 153 aaKnown RBP10.25□□□□□ -0.77
TCF3-220ENST00000611869 SIGLEC8Q9NYZ4 499 aa10.25□□□□□ -0.77
TCF3-220ENST00000611869 ADAMTS20P59510 1910 aa10.24□□□□□ -0.77
TCF3-220ENST00000611869 LMO4P61968 165 aa10.24□□□□□ -0.77
TCF3-220ENST00000611869 GTSF1Q8WW33 167 aa10.24□□□□□ -0.77
TCF3-220ENST00000611869 NAA38Q9BRA0 125 aaKnown RBP10.24□□□□□ -0.77
TCF3-220ENST00000611869 CSTL1Q9H114 145 aa10.24□□□□□ -0.77
TCF3-220ENST00000611869 TRAV12-2A0A075B6T6 113 aa10.24□□□□□ -0.77
TCF3-220ENST00000611869 BUB3O43684 328 aa10.24□□□□□ -0.77
TCF3-220ENST00000611869 FOXE3Q13461 319 aa10.24□□□□□ -0.77
TCF3-220ENST00000611869 ANXA2RQ3ZCQ2 193 aa10.24□□□□□ -0.77
TCF3-220ENST00000611869 VCX2Q9H322 139 aa10.24□□□□□ -0.77
TCF3-220ENST00000611869 APOMO95445 188 aa10.24□□□□□ -0.77
TCF3-220ENST00000611869 SUMO2P61956 95 aaKnown RBP10.24□□□□□ -0.77
TCF3-220ENST00000611869 C5orf56Q8N8D9 126 aa10.24□□□□□ -0.77
TCF3-220ENST00000611869 WIPF2Q8TF74 440 aaPredicted RBP10.24□□□□□ -0.77
TCF3-220ENST00000611869 IGLC2P0DOY2 106 aa10.23□□□□□ -0.77
TCF3-220ENST00000611869 IGLC3P0DOY3 106 aa10.23□□□□□ -0.77
TCF3-220ENST00000611869 IGLL1P15814 213 aa10.23□□□□□ -0.77
TCF3-220ENST00000611869 SAP30O75446 220 aa10.23□□□□□ -0.77
TCF3-220ENST00000611869 MAJINQ3KP22 176 aa10.23□□□□□ -0.77
TCF3-220ENST00000611869 ZNF876PQ49A33 203 aa10.23□□□□□ -0.77
TCF3-220ENST00000611869 KLF12Q9Y4X4 402 aa10.23□□□□□ -0.77
TCF3-220ENST00000611869 LINC01548A6NM66 108 aa10.23□□□□□ -0.77
TCF3-220ENST00000611869 KLK9Q9UKQ9 250 aa10.23□□□□□ -0.77
TCF3-220ENST00000611869 IGHV7-4-1A0A0J9YVY3 117 aa10.23□□□□□ -0.77
TCF3-220ENST00000611869 WI2-2373I1.2A0A1W2PRP0 233 aa10.23□□□□□ -0.77
TCF3-220ENST00000611869 PRAC2D3DTV9 90 aa10.23□□□□□ -0.77
TCF3-220ENST00000611869 HOXA3O43365 443 aaPredicted RBP10.23□□□□□ -0.77
TCF3-220ENST00000611869 SFTA2Q6UW10 78 aa10.23□□□□□ -0.77
TCF3-220ENST00000611869 UBE2E2Q96LR5 201 aa10.23□□□□□ -0.77
TCF3-220ENST00000611869 SZT2Q5T011 3432 aa10.22□□□□□ -0.77
TCF3-220ENST00000611869 ABCA12Q86UK0 2595 aa10.22□□□□□ -0.77
TCF3-220ENST00000611869 TDRG1Q3Y452 100 aa10.22□□□□□ -0.77
TCF3-220ENST00000611869 CFHR4Q92496 578 aa10.22□□□□□ -0.77
TCF3-220ENST00000611869 SMAGPQ0VAQ4 97 aa10.22□□□□□ -0.77
TCF3-220ENST00000611869 TCTEX1D4Q5JR98 221 aa10.22□□□□□ -0.77
TCF3-220ENST00000611869 ORAOV1Q8WV07 137 aa10.22□□□□□ -0.77
TCF3-220ENST00000611869 IGKV3D-20A0A0C4DH25 116 aa10.22□□□□□ -0.77
TCF3-220ENST00000611869 ODF3BA8MYP8 253 aa10.22□□□□□ -0.77
TCF3-220ENST00000611869 IGLV2-8P01709 118 aa10.22□□□□□ -0.77
TCF3-220ENST00000611869 SPOCK3Q9BQ16 436 aa10.22□□□□□ -0.77
TCF3-220ENST00000611869 MSRB1Q9NZV6 116 aa10.22□□□□□ -0.77
TCF3-220ENST00000611869 IGHV3-64A0A075B6Q5 118 aa10.21□□□□□ -0.77
TCF3-220ENST00000611869 KNCNA6PVL3 124 aa10.21□□□□□ -0.78
TCF3-220ENST00000611869 MRPL16Q9NX20 251 aaKnown RBP10.21□□□□□ -0.78
TCF3-220ENST00000611869 LINC00322Q6ZN03 302 aaPredicted RBP10.21□□□□□ -0.78
TCF3-220ENST00000611869 TEX43Q6ZNM6 134 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms