RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 J3QR89 54 aa4.96□□□□□ -1.62
SNX13-213ENST00000611725 ZNF688P0C7X2 276 aa4.96□□□□□ -1.62
SNX13-213ENST00000611725 RPL24P83731 157 aaKnown RBP4.96□□□□□ -1.62
SNX13-213ENST00000611725 SRSF9Q13242 221 aaKnown RBP eCLIP4.96□□□□□ -1.62
SNX13-213ENST00000611725 OR9G4Q8NGQ1 327 aa4.96□□□□□ -1.62
SNX13-213ENST00000611725 RAB37Q96AX2 223 aa4.96□□□□□ -1.62
SNX13-213ENST00000611725 NPIPB6E9PJ23 425 aa4.96□□□□□ -1.62
SNX13-213ENST00000611725 LINC01559Q495D7 138 aa4.96□□□□□ -1.62
SNX13-213ENST00000611725 IL17RELQ6ZVW7 336 aa4.96□□□□□ -1.62
SNX13-213ENST00000611725 PIP4P2Q8N4L2 257 aa4.96□□□□□ -1.62
SNX13-213ENST00000611725 SMPXQ9UHP9 88 aa4.96□□□□□ -1.62
SNX13-213ENST00000611725 HERVK_113P61574 105 aa4.96□□□□□ -1.62
SNX13-213ENST00000611725 BCL6BQ8N143 479 aaPredicted RBP4.96□□□□□ -1.62
SNX13-213ENST00000611725 SCGB3A1Q96QR1 104 aa4.96□□□□□ -1.62
SNX13-213ENST00000611725 SELENOKQ9Y6D0 94 aa4.96□□□□□ -1.62
SNX13-213ENST00000611725 EXPH5Q8NEV8 1989 aa4.96□□□□□ -1.62
SNX13-213ENST00000611725 PRAC2D3DTV9 90 aa4.95□□□□□ -1.62
SNX13-213ENST00000611725 SRSF1Q07955 248 aaKnown RBP eCLIP4.95□□□□□ -1.62
SNX13-213ENST00000611725 ORMDL2Q53FV1 153 aa4.95□□□□□ -1.62
SNX13-213ENST00000611725 DGAT2L7PQ6IED9 249 aa4.95□□□□□ -1.62
SNX13-213ENST00000611725 C14orf178Q8N769 122 aaPredicted RBP4.95□□□□□ -1.62
SNX13-213ENST00000611725 CHD3Q12873 2000 aaKnown RBP4.95□□□□□ -1.62
SNX13-213ENST00000611725 A0A1W2PPR1 153 aa4.95□□□□□ -1.62
SNX13-213ENST00000611725 NPSP0C0P6 89 aa4.95□□□□□ -1.62
SNX13-213ENST00000611725 RNASE4P34096 147 aaKnown RBP4.95□□□□□ -1.62
SNX13-213ENST00000611725 DSCR9P59020 149 aa4.95□□□□□ -1.62
SNX13-213ENST00000611725 NDUFA4O00483 81 aa4.95□□□□□ -1.62
SNX13-213ENST00000611725 SLC25A16P16260 332 aa4.95□□□□□ -1.62
SNX13-213ENST00000611725 C11orf71Q6IPW1 123 aa4.95□□□□□ -1.62
SNX13-213ENST00000611725 ERASQ7Z444 233 aa4.95□□□□□ -1.62
SNX13-213ENST00000611725 RNF114Q9Y508 228 aa4.95□□□□□ -1.62
SNX13-213ENST00000611725 FABP2P12104 132 aa4.95□□□□□ -1.62
SNX13-213ENST00000611725 SEC11AP67812 179 aa4.95□□□□□ -1.62
SNX13-213ENST00000611725 A0A087X0K7 114 aa4.95□□□□□ -1.62
SNX13-213ENST00000611725 TMEM158Q8WZ71 300 aa4.95□□□□□ -1.62
SNX13-213ENST00000611725 PCSK5Q92824 1860 aa4.95□□□□□ -1.62
SNX13-213ENST00000611725 IGLV2-11P01706 119 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 CD7P09564 240 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 BLCAPP62952 87 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 Q8N6K4 173 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 ORAOV1Q8WV07 137 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 LINC01548A6NM66 108 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 DPM2O94777 84 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 OR2K2Q8NGT1 345 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 SRD5A1P18405 259 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 ZNF56Q15929 161 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 MRGPRG-AS1Q2M3A8 158 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 LCNL1Q6ZST4 164 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 SYT8Q8NBV8 401 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 C10orf105Q8TEF2 133 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 LENEPQ9Y5L5 61 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 FLNCQ14315 2725 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 GATA3P23771 443 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 DYNLRB2Q8TF09 96 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 DPH3P1Q9H4G8 78 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 H3BUT2 72 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 HSD52Q0P140 79 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 PCP4P48539 62 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 SPATA12Q7Z6I5 190 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 ATP6V0BQ99437 205 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 CYSLTR1Q9Y271 337 aa4.94□□□□□ -1.62
SNX13-213ENST00000611725 LAMA1P25391 3075 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 Q8N976 141 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 CCDC140Q96MF4 163 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 C19orf84I3L1E1 186 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 ZNF80P51504 273 aaPredicted RBP4.93□□□□□ -1.62
SNX13-213ENST00000611725 LINC01545Q5VT33 79 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 AKAP13Q12802 2813 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 KIAA1549Q9HCM3 1950 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 RBAKDNA6NC62 111 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 UBE2V1Q13404 147 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 LAGE3Q14657 143 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 LGALS9BQ3B8N2 356 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 PAPPA-AS1Q5QFB9 102 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 LGALS9CQ6DKI2 356 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 HIST1H4GQ99525 98 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 IGKCP01834 107 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 IGHV4-38-2P0DP08 117 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 SUMO2P61956 95 aaKnown RBP4.93□□□□□ -1.62
SNX13-213ENST00000611725 ZNF493Q6ZR52 646 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 ZNF256Q9Y2P7 627 aaPredicted RBP4.93□□□□□ -1.62
SNX13-213ENST00000611725 IGHV4-30-2A0A087WSY4 118 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 CD5LO43866 347 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 C5orf56Q8N8D9 126 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 WFDC12Q8WWY7 111 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 MRPL53Q96EL3 112 aaKnown RBP4.93□□□□□ -1.62
SNX13-213ENST00000611725 RAX2Q96IS3 184 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 ATRQ13535 2644 aa4.93□□□□□ -1.62
SNX13-213ENST00000611725 HELZ2Q9BYK8 2649 aaKnown RBP4.93□□□□□ -1.62
SNX13-213ENST00000611725 F6UB75 175 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 CRXO43186 299 aaPredicted RBP4.92□□□□□ -1.62
SNX13-213ENST00000611725 Q8N8P6 123 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 H3BUA1 57 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 DSCAMO60469 2012 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 DUSP14O95147 198 aaKnown RBP4.92□□□□□ -1.62
SNX13-213ENST00000611725 GATA1P15976 413 aaPredicted RBP4.92□□□□□ -1.62
SNX13-213ENST00000611725 GTSCR1Q86UQ5 136 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 SMIM2Q9BVW6 85 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 COX8AP10176 69 aa4.92□□□□□ -1.62
SNX13-213ENST00000611725 C2orf66Q6UXQ4 117 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms