RNA–Protein interactions for RNA: ENST00000609959.1

CCDC144B-206, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 808 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-206ENST00000609959 METTL15P1P0C7V9 234 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 LGALS3P17931 250 aaKnown RBP1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 SRP14P37108 136 aaKnown RBP1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 RPS28P62857 69 aaKnown RBP1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 EIF5AP63241 154 aaKnown RBP1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 S100A12P80511 92 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 SARNPP82979 210 aaKnown RBP1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 SURF2Q15527 256 aaPredicted RBP1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 TAF9Q16594 264 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 KRTAP6-3Q3LI67 103 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 SAMD13Q5VXD3 122 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 C22orf39Q6P5X5 142 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 Q6ZTI0 123 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 BPIFA4PQ86YQ2 179 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 PRR15Q8IV56 129 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 TMEM86AQ8N2M4 240 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 OR9Q1Q8NGQ5 310 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 STAG3L4Q8TBR4 150 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 DCANP1Q8TF63 244 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 THEM6Q8WUY1 208 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 DNAJC9Q8WXX5 260 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 HIST1H2BLQ99880 126 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 HSPB9Q9BQS6 159 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 EFCAB11Q9BUY7 163 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 CCDC32Q9BV29 185 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 CXCL16Q9H2A7 254 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 OR52A1Q9UKL2 312 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 NUBP2Q9Y5Y2 271 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 CCDC171Q6TFL3 1326 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 ZNF106Q9H2Y7 1883 aaKnown RBP1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 CRYBG3Q68DQ2 2970 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 MYH7P12883 1935 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 MTORP42345 2549 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 ZNF469Q96JG9 3925 aaPredicted RBP1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 KNTC1P50748 2209 aa1.3□□□□□ -2.2
CCDC144B-206ENST00000609959 ANK1P16157 1881 aa1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 NUP210Q8TEM1 1887 aaPredicted RBP1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 MYLKQ15746 1914 aa1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 TMSB15BA0A087X1C1 80 aa1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 TRGV10A0A0A0MS01 117 aa1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 C1orf196B1AJZ1 125 aa1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 LY6LH3BQJ8 138 aa1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 PPBPP02775 128 aa1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 NFYBP25208 207 aa1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 PEBP1P30086 187 aaKnown RBP1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 INSL3P51460 131 aa1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 POLR2HP52434 150 aaKnown RBP1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 UBE2BP63146 152 aa1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 PLCXD2Q0VAA5 305 aa1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 NDUFA5Q16718 116 aa1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 BCL2L15Q5TBC7 163 aa1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 C1orf140Q5VVS0 124 aa1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 PHF5AQ7RTV0 110 aaKnown RBP1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 C3orf56Q8N813 242 aa1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 GRPEL2Q8TAA5 225 aa1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 ISOC1Q96CN7 298 aa1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 CARD19Q96LW7 228 aa1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 DOHHQ9BU89 302 aa1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 MRPL32Q9BYC8 188 aaKnown RBP1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 NHP2Q9NX24 153 aaKnown RBP1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 SPANXCQ9NY87 97 aa1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 BAIAP2Q9UQB8 552 aa1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 NBASA2RRP1 2371 aa1.29□□□□□ -2.2
CCDC144B-206ENST00000609959 TRPM6Q9BX84 2022 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 PLXNB1O43157 2135 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 SDK2Q58EX2 2172 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 A0A087WX48 190 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 TRAV5A0A0B4J249 113 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 A0A1B0GVG6 124 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 CCL16O15467 120 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 GADD45GO95257 159 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 NAPSAO96009 420 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 CTSDP07339 412 aaPredicted RBP1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 BCL2P10415 239 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 DEFA4P12838 97 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 HLA-EP13747 358 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 EIF2B2P49770 351 aaKnown RBP1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 RELAQ04206 551 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 RTL8BQ17RB0 113 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 LCN15Q6UWW0 184 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 Q6ZQT0 140 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 DHFR2Q86XF0 187 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 ST6GALNAC3Q8NDV1 305 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 OR5A1Q8NGJ0 315 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 TCEAL4Q96EI5 215 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 CCDC115Q96NT0 180 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 AIF1LQ9BQI0 150 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 GINS4Q9BRT9 223 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 MED11Q9P086 117 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 LAMTOR2Q9Y2Q5 125 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 ASB4Q9Y574 426 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 MYH6P13533 1939 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 DENND4CQ5VZ89 1909 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 CEP192Q8TEP8 1941 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 APCP25054 2843 aa1.28□□□□□ -2.2
CCDC144B-206ENST00000609959 ANKHD1Q8IWZ3 2542 aaKnown RBP1.27□□□□□ -2.21
CCDC144B-206ENST00000609959 FN1P02751 2386 aaKnown RBP1.27□□□□□ -2.21
CCDC144B-206ENST00000609959 IGLV3-9A0A075B6K5 115 aa1.27□□□□□ -2.21
CCDC144B-206ENST00000609959 A0A1B0GX51 115 aa1.27□□□□□ -2.21
CCDC144B-206ENST00000609959 TRDV1A0A1B0GX56 115 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms