RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 ISOC2Q96AB3 205 aa8.45□□□□□ -1.06
LINC00539-204ENST00000608957 RPS10P5Q9NQ39 176 aa8.45□□□□□ -1.06
LINC00539-204ENST00000608957 PSG8Q9UQ74 426 aa8.45□□□□□ -1.06
LINC00539-204ENST00000608957 TP53TG1Q9Y2A0 90 aa8.45□□□□□ -1.06
LINC00539-204ENST00000608957 RYR2Q92736 4967 aa8.44□□□□□ -1.06
LINC00539-204ENST00000608957 A0A0J9YWU9 116 aa8.44□□□□□ -1.06
LINC00539-204ENST00000608957 LCE6AA0A183 80 aa8.44□□□□□ -1.06
LINC00539-204ENST00000608957 K7EN84 100 aa8.44□□□□□ -1.06
LINC00539-204ENST00000608957 UBE2CO00762 179 aa8.44□□□□□ -1.06
LINC00539-204ENST00000608957 SPRY2O43597 315 aa8.44□□□□□ -1.06
LINC00539-204ENST00000608957 IGLV2-8P01709 118 aa8.44□□□□□ -1.06
LINC00539-204ENST00000608957 MGST1P10620 155 aaKnown RBP8.44□□□□□ -1.06
LINC00539-204ENST00000608957 DEFB131AP59861 70 aa8.44□□□□□ -1.06
LINC00539-204ENST00000608957 SNRPD3P62318 126 aaKnown RBP8.44□□□□□ -1.06
LINC00539-204ENST00000608957 NHLRC2Q8NBF2 726 aa8.44□□□□□ -1.06
LINC00539-204ENST00000608957 RNF183Q96D59 192 aa8.44□□□□□ -1.06
LINC00539-204ENST00000608957 A0A087WWC5 75 aa8.43□□□□□ -1.06
LINC00539-204ENST00000608957 GCGP01275 180 aa8.43□□□□□ -1.06
LINC00539-204ENST00000608957 ZNF688P0C7X2 276 aa8.43□□□□□ -1.06
LINC00539-204ENST00000608957 RNF212Q495C1 297 aa8.43□□□□□ -1.06
LINC00539-204ENST00000608957 TMEM183AQ8IXX5 376 aa8.43□□□□□ -1.06
LINC00539-204ENST00000608957 IL17DQ8TAD2 202 aa8.43□□□□□ -1.06
LINC00539-204ENST00000608957 Q8TAT8 98 aa8.43□□□□□ -1.06
LINC00539-204ENST00000608957 VGLL1Q99990 258 aa8.43□□□□□ -1.06
LINC00539-204ENST00000608957 MLST8Q9BVC4 326 aa8.43□□□□□ -1.06
LINC00539-204ENST00000608957 ZFP30Q9Y2G7 519 aa8.43□□□□□ -1.06
LINC00539-204ENST00000608957 ALMS1Q8TCU4 4167 aa8.43□□□□□ -1.06
LINC00539-204ENST00000608957 DNAH1Q9P2D7 4330 aa8.43□□□□□ -1.06
LINC00539-204ENST00000608957 MT-ND4LP03901 98 aa8.42□□□□□ -1.06
LINC00539-204ENST00000608957 CMC4P56277 68 aaPredicted RBP8.42□□□□□ -1.06
LINC00539-204ENST00000608957 OR5I1Q13606 314 aa8.42□□□□□ -1.06
LINC00539-204ENST00000608957 PSMG4Q5JS54 123 aa8.42□□□□□ -1.06
LINC00539-204ENST00000608957 C9orf47Q6ZRZ4 202 aa8.42□□□□□ -1.06
LINC00539-204ENST00000608957 OR10J6PQ8NGY7 276 aa8.42□□□□□ -1.06
LINC00539-204ENST00000608957 SFRP2Q96HF1 295 aa8.42□□□□□ -1.06
LINC00539-204ENST00000608957 NDFIP1Q9BT67 221 aa8.42□□□□□ -1.06
LINC00539-204ENST00000608957 CTDSP1Q9GZU7 261 aa8.42□□□□□ -1.06
LINC00539-204ENST00000608957 CSTL1Q9H114 145 aa8.42□□□□□ -1.06
LINC00539-204ENST00000608957 NPIPB6E9PJ23 425 aa8.41□□□□□ -1.06
LINC00539-204ENST00000608957 GIG44P09565 113 aaPredicted RBP8.41□□□□□ -1.06
LINC00539-204ENST00000608957 ZNF138P52744 262 aa8.41□□□□□ -1.06
LINC00539-204ENST00000608957 ERVFC1-1P60608 527 aa8.41□□□□□ -1.06
LINC00539-204ENST00000608957 ERCC8Q13216 396 aa8.41□□□□□ -1.06
LINC00539-204ENST00000608957 SAPCD1Q5SSQ6 148 aa8.41□□□□□ -1.06
LINC00539-204ENST00000608957 TMEM78Q5T7P6 136 aa8.41□□□□□ -1.06
LINC00539-204ENST00000608957 PRR27Q6MZM9 219 aa8.41□□□□□ -1.06
LINC00539-204ENST00000608957 TMEM88Q6PEY1 159 aa8.41□□□□□ -1.06
LINC00539-204ENST00000608957 CBLN2Q8IUK8 224 aa8.41□□□□□ -1.06
LINC00539-204ENST00000608957 OR8A1Q8NGG7 326 aa8.41□□□□□ -1.06
LINC00539-204ENST00000608957 ANAPC16Q96DE5 110 aa8.41□□□□□ -1.06
LINC00539-204ENST00000608957 AGPAT4-IT1Q9H0P7 198 aa8.41□□□□□ -1.06
LINC00539-204ENST00000608957 BIN3Q9NQY0 253 aa8.41□□□□□ -1.06
LINC00539-204ENST00000608957 SMCO4Q9NRQ5 59 aa8.41□□□□□ -1.06
LINC00539-204ENST00000608957 PLECQ15149 4684 aaKnown RBP8.4□□□□□ -1.06
LINC00539-204ENST00000608957 KNCNA6PVL3 124 aa8.4□□□□□ -1.06
LINC00539-204ENST00000608957 F6UB75 175 aa8.4□□□□□ -1.06
LINC00539-204ENST00000608957 H7BYZ3 331 aa8.4□□□□□ -1.06
LINC00539-204ENST00000608957 PPP1R2P9O14990 202 aa8.4□□□□□ -1.06
LINC00539-204ENST00000608957 DEFB1P60022 68 aa8.4□□□□□ -1.06
LINC00539-204ENST00000608957 HIST1H1AQ02539 215 aaPredicted RBP8.4□□□□□ -1.06
LINC00539-204ENST00000608957 BTN1A1Q13410 526 aa8.4□□□□□ -1.06
LINC00539-204ENST00000608957 C15orf54Q8N8G6 183 aa8.4□□□□□ -1.06
LINC00539-204ENST00000608957 OR10G8Q8NGN5 311 aa8.4□□□□□ -1.06
LINC00539-204ENST00000608957 C8orf49Q96NF6 230 aa8.4□□□□□ -1.06
LINC00539-204ENST00000608957 OSTCQ9NRP0 149 aa8.4□□□□□ -1.06
LINC00539-204ENST00000608957 TMEM242Q9NWH2 141 aa8.4□□□□□ -1.06
LINC00539-204ENST00000608957 PPP1R14DQ9NXH3 145 aa8.4□□□□□ -1.06
LINC00539-204ENST00000608957 ZNF492Q9P255 531 aa8.4□□□□□ -1.06
LINC00539-204ENST00000608957 HYDINQ4G0P3 5121 aa8.4□□□□□ -1.07
LINC00539-204ENST00000608957 ZNF705DP0CH99 300 aaPredicted RBP8.39□□□□□ -1.07
LINC00539-204ENST00000608957 ZNF705BP0CI00 300 aaPredicted RBP8.39□□□□□ -1.07
LINC00539-204ENST00000608957 CT45A10P0DMU9 189 aa8.39□□□□□ -1.07
LINC00539-204ENST00000608957 IBA57Q5T440 356 aaKnown RBP8.39□□□□□ -1.07
LINC00539-204ENST00000608957 FAM231DQ6ZW35 169 aa8.39□□□□□ -1.07
LINC00539-204ENST00000608957 COX8CQ7Z4L0 72 aa8.39□□□□□ -1.07
LINC00539-204ENST00000608957 TRPT1Q86TN4 253 aaKnown RBP8.39□□□□□ -1.07
LINC00539-204ENST00000608957 ZC2HC1AQ96GY0 325 aa8.39□□□□□ -1.07
LINC00539-204ENST00000608957 LINC00477Q96M19 166 aa8.39□□□□□ -1.07
LINC00539-204ENST00000608957 RNASE7Q9H1E1 156 aaKnown RBP8.39□□□□□ -1.07
LINC00539-204ENST00000608957 LENEPQ9Y5L5 61 aa8.39□□□□□ -1.07
LINC00539-204ENST00000608957 CA1P00915 261 aaPredicted RBP8.38□□□□□ -1.07
LINC00539-204ENST00000608957 SMUG1Q53HV7 270 aa8.38□□□□□ -1.07
LINC00539-204ENST00000608957 GDF5OSQ5U4N7 250 aa8.38□□□□□ -1.07
LINC00539-204ENST00000608957 EBLN2Q6P2I7 272 aa8.38□□□□□ -1.07
LINC00539-204ENST00000608957 FOXI2Q6ZQN5 318 aa8.38□□□□□ -1.07
LINC00539-204ENST00000608957 SAV1Q9H4B6 383 aaPredicted RBP8.38□□□□□ -1.07
LINC00539-204ENST00000608957 TRBV7-9A0A0J9YWB2 115 aa8.37□□□□□ -1.07
LINC00539-204ENST00000608957 A0A0J9YX75 114 aa8.37□□□□□ -1.07
LINC00539-204ENST00000608957 C19orf71A6NCJ1 209 aa8.37□□□□□ -1.07
LINC00539-204ENST00000608957 CXorf65A6NEN9 183 aa8.37□□□□□ -1.07
LINC00539-204ENST00000608957 ZNF705GA8MUZ8 300 aaPredicted RBP8.37□□□□□ -1.07
LINC00539-204ENST00000608957 GATCO43716 136 aaKnown RBP8.37□□□□□ -1.07
LINC00539-204ENST00000608957 DUSP14O95147 198 aaKnown RBP8.37□□□□□ -1.07
LINC00539-204ENST00000608957 STHQ8IWL8 128 aa8.37□□□□□ -1.07
LINC00539-204ENST00000608957 OR11H2Q8NH07 326 aa8.37□□□□□ -1.07
LINC00539-204ENST00000608957 DAZAP1Q96EP5 407 aaKnown RBP8.37□□□□□ -1.07
LINC00539-204ENST00000608957 FAM19A4Q96LR4 140 aa8.37□□□□□ -1.07
LINC00539-204ENST00000608957 ODF3Q96PU9 254 aa8.37□□□□□ -1.07
LINC00539-204ENST00000608957 V9GYV3 84 aa8.37□□□□□ -1.07
LINC00539-204ENST00000608957 SH2D1AO60880 128 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms