RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 CCDC28AQ8IWP9 274 aa9.56□□□□□ -0.88
CTSA-218ENST00000607814 SGK494Q96LW2 274 aa9.56□□□□□ -0.88
CTSA-218ENST00000607814 GSN-AS1Q9NRJ2 163 aa9.56□□□□□ -0.88
CTSA-218ENST00000607814 ZNF492Q9P255 531 aa9.56□□□□□ -0.88
CTSA-218ENST00000607814 DNAH5Q8TE73 4624 aa9.55□□□□□ -0.88
CTSA-218ENST00000607814 IGLV2-18A0A075B6J9 118 aa9.55□□□□□ -0.88
CTSA-218ENST00000607814 CBY3A6NI87 242 aa9.55□□□□□ -0.88
CTSA-218ENST00000607814 DIRC3C9JPN6 131 aa9.55□□□□□ -0.88
CTSA-218ENST00000607814 ARPC5O15511 151 aa9.55□□□□□ -0.88
CTSA-218ENST00000607814 ARL14EPLP0DKL9 152 aa9.55□□□□□ -0.88
CTSA-218ENST00000607814 CDC34P49427 236 aaPredicted RBP9.55□□□□□ -0.88
CTSA-218ENST00000607814 ZNF138P52744 262 aa9.55□□□□□ -0.88
CTSA-218ENST00000607814 RAB24Q969Q5 203 aa9.55□□□□□ -0.88
CTSA-218ENST00000607814 C20orf144Q9BQM9 153 aa9.55□□□□□ -0.88
CTSA-218ENST00000607814 TRAV8-1A0A0A6YYK1 113 aa9.54□□□□□ -0.88
CTSA-218ENST00000607814 CRISP2P16562 243 aa9.54□□□□□ -0.88
CTSA-218ENST00000607814 MUC21Q5SSG8 566 aa9.54□□□□□ -0.88
CTSA-218ENST00000607814 ZNF493Q6ZR52 646 aa9.54□□□□□ -0.88
CTSA-218ENST00000607814 Q6ZTI0 123 aa9.54□□□□□ -0.88
CTSA-218ENST00000607814 GOLT1AQ6ZVE7 132 aa9.54□□□□□ -0.88
CTSA-218ENST00000607814 OR2G3Q8NGZ4 309 aa9.54□□□□□ -0.88
CTSA-218ENST00000607814 PYGO2Q9BRQ0 406 aa9.54□□□□□ -0.88
CTSA-218ENST00000607814 KLF12Q9Y4X4 402 aa9.54□□□□□ -0.88
CTSA-218ENST00000607814 SNURFLB1AK76 121 aa9.53□□□□□ -0.88
CTSA-218ENST00000607814 RGS13O14921 159 aa9.53□□□□□ -0.88
CTSA-218ENST00000607814 NUDT3O95989 172 aa9.53□□□□□ -0.88
CTSA-218ENST00000607814 ATP5G1P05496 136 aa9.53□□□□□ -0.88
CTSA-218ENST00000607814 STAG3L2P0CL84 134 aa9.53□□□□□ -0.88
CTSA-218ENST00000607814 STAG3L3P0CL85 134 aa9.53□□□□□ -0.88
CTSA-218ENST00000607814 ATP5G3P48201 142 aa9.53□□□□□ -0.88
CTSA-218ENST00000607814 FAM3BP58499 235 aaPredicted RBP9.53□□□□□ -0.88
CTSA-218ENST00000607814 OR5I1Q13606 314 aa9.53□□□□□ -0.88
CTSA-218ENST00000607814 PQLC2Q6ZP29 291 aa9.53□□□□□ -0.88
CTSA-218ENST00000607814 IQCF2Q8IXL9 164 aa9.53□□□□□ -0.88
CTSA-218ENST00000607814 TCTE3Q8IZS6 198 aa9.53□□□□□ -0.88
CTSA-218ENST00000607814 LYPD1Q8N2G4 141 aa9.53□□□□□ -0.88
CTSA-218ENST00000607814 C11orf72Q8NBR9 251 aa9.53□□□□□ -0.88
CTSA-218ENST00000607814 CMTM2Q8TAZ6 248 aa9.53□□□□□ -0.88
CTSA-218ENST00000607814 PSMG3Q9BT73 122 aaPredicted RBP9.53□□□□□ -0.88
CTSA-218ENST00000607814 OTORQ9NRC9 128 aa9.53□□□□□ -0.88
CTSA-218ENST00000607814 BORCS7-ASMTA0A0B4J1R7 106 aa9.52□□□□□ -0.89
CTSA-218ENST00000607814 A0A0J9YY99 117 aa9.52□□□□□ -0.89
CTSA-218ENST00000607814 HOXA5P20719 270 aa9.52□□□□□ -0.89
CTSA-218ENST00000607814 GCHFRP30047 84 aa9.52□□□□□ -0.89
CTSA-218ENST00000607814 ZNF726P1Q15940 193 aa9.52□□□□□ -0.89
CTSA-218ENST00000607814 EIF4E3Q8N5X7 224 aaKnown RBP9.52□□□□□ -0.89
CTSA-218ENST00000607814 ST6GAL2Q96JF0 529 aa9.52□□□□□ -0.89
CTSA-218ENST00000607814 TMPRSS5Q9H3S3 457 aa9.52□□□□□ -0.89
CTSA-218ENST00000607814 CYTL1Q9NRR1 136 aa9.52□□□□□ -0.89
CTSA-218ENST00000607814 IGHV1OR15-1A0A075B7D0 117 aa9.51□□□□□ -0.89
CTSA-218ENST00000607814 F6UZH7 168 aa9.51□□□□□ -0.89
CTSA-218ENST00000607814 FGF8P55075 233 aaPredicted RBP9.51□□□□□ -0.89
CTSA-218ENST00000607814 OR11H4Q8NGC9 324 aa9.51□□□□□ -0.89
CTSA-218ENST00000607814 RXFP4Q8TDU9 374 aa9.51□□□□□ -0.89
CTSA-218ENST00000607814 TVP23CQ96ET8 276 aa9.51□□□□□ -0.89
CTSA-218ENST00000607814 ACTR3CQ9C0K3 210 aaPredicted RBP9.51□□□□□ -0.89
CTSA-218ENST00000607814 TRGV1A0A0A0MS02 117 aa9.5□□□□□ -0.89
CTSA-218ENST00000607814 RBAKDNA6NC62 111 aa9.5□□□□□ -0.89
CTSA-218ENST00000607814 SERF2P84101 59 aa9.5□□□□□ -0.89
CTSA-218ENST00000607814 LINC00612Q8N6U2 182 aa9.5□□□□□ -0.89
CTSA-218ENST00000607814 SCRT2Q9NQ03 307 aa9.5□□□□□ -0.89
CTSA-218ENST00000607814 MRPL16Q9NX20 251 aaKnown RBP9.5□□□□□ -0.89
CTSA-218ENST00000607814 MDFICQ9P1T7 246 aa9.5□□□□□ -0.89
CTSA-218ENST00000607814 NAGKQ9UJ70 344 aa9.5□□□□□ -0.89
CTSA-218ENST00000607814 NACAE9PAV3 2078 aa9.5□□□□□ -0.89
CTSA-218ENST00000607814 TRAV26-1A0A087WT03 109 aa9.49□□□□□ -0.89
CTSA-218ENST00000607814 IGHV3-53P01767 116 aa9.49□□□□□ -0.89
CTSA-218ENST00000607814 MBP02144 154 aa9.49□□□□□ -0.89
CTSA-218ENST00000607814 NMBP08949 121 aa9.49□□□□□ -0.89
CTSA-218ENST00000607814 UBE2G2P60604 165 aa9.49□□□□□ -0.89
CTSA-218ENST00000607814 SUMO1P63165 101 aaKnown RBP9.49□□□□□ -0.89
CTSA-218ENST00000607814 TNP2Q05952 138 aa9.49□□□□□ -0.89
CTSA-218ENST00000607814 ANXA2RQ3ZCQ2 193 aa9.49□□□□□ -0.89
CTSA-218ENST00000607814 FAM74A1Q5RGS3 127 aa9.49□□□□□ -0.89
CTSA-218ENST00000607814 GNPNAT1Q96EK6 184 aaPredicted RBP9.49□□□□□ -0.89
CTSA-218ENST00000607814 TRGV2A0A075B6R0 118 aa9.48□□□□□ -0.89
CTSA-218ENST00000607814 GGTLC3B5MD39 225 aa9.48□□□□□ -0.89
CTSA-218ENST00000607814 GNRH2O43555 120 aa9.48□□□□□ -0.89
CTSA-218ENST00000607814 CXorf1O96002 111 aa9.48□□□□□ -0.89
CTSA-218ENST00000607814 C1QBP02746 253 aa9.48□□□□□ -0.89
CTSA-218ENST00000607814 FHITP49789 147 aa9.48□□□□□ -0.89
CTSA-218ENST00000607814 DAZ2Q13117 558 aaKnown RBP9.48□□□□□ -0.89
CTSA-218ENST00000607814 TMEM183BQ1AE95 376 aa9.48□□□□□ -0.89
CTSA-218ENST00000607814 TMEM183AQ8IXX5 376 aa9.48□□□□□ -0.89
CTSA-218ENST00000607814 LINC00479Q96M42 142 aa9.48□□□□□ -0.89
CTSA-218ENST00000607814 C8orf49Q96NF6 230 aa9.48□□□□□ -0.89
CTSA-218ENST00000607814 ARPC5LQ9BPX5 153 aa9.48□□□□□ -0.89
CTSA-218ENST00000607814 LINC00467Q9BRT7 94 aa9.48□□□□□ -0.89
CTSA-218ENST00000607814 SPINK4O60575 86 aa9.47□□□□□ -0.89
CTSA-218ENST00000607814 TCRAP04437 139 aa9.47□□□□□ -0.89
CTSA-218ENST00000607814 TCL1AP56279 114 aa9.47□□□□□ -0.89
CTSA-218ENST00000607814 ZFP69Q49AA0 526 aa9.47□□□□□ -0.89
CTSA-218ENST00000607814 AKR1C8PQ5T2L2 129 aa9.47□□□□□ -0.89
CTSA-218ENST00000607814 ZNF680Q8NEM1 530 aa9.47□□□□□ -0.89
CTSA-218ENST00000607814 SUN5Q8TC36 379 aa9.47□□□□□ -0.89
CTSA-218ENST00000607814 TREM1Q9NP99 234 aa9.47□□□□□ -0.89
CTSA-218ENST00000607814 SRRM2Q9UQ35 2752 aaKnown RBP9.46□□□□□ -0.9
CTSA-218ENST00000607814 TRAV34A0A0B4J273 112 aa9.46□□□□□ -0.9
CTSA-218ENST00000607814 ZNF80P51504 273 aaPredicted RBP9.46□□□□□ -0.9
CTSA-218ENST00000607814 Q6AWC8 147 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 155.3 ms