RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 ALMS1Q8TCU4 4167 aa11.71□□□□□ -0.54
LINC00240-203ENST00000606878 IGHV1OR15-1A0A075B7D0 117 aa11.7□□□□□ -0.54
LINC00240-203ENST00000606878 SERTM2A0A1B0GWG4 89 aa11.7□□□□□ -0.54
LINC00240-203ENST00000606878 SUMO1P63165 101 aaKnown RBP11.7□□□□□ -0.54
LINC00240-203ENST00000606878 PRR9Q5T870 116 aa11.7□□□□□ -0.54
LINC00240-203ENST00000606878 TMEM88Q6PEY1 159 aa11.7□□□□□ -0.54
LINC00240-203ENST00000606878 C5orf17Q8NAS9 161 aa11.7□□□□□ -0.54
LINC00240-203ENST00000606878 OR11H4Q8NGC9 324 aa11.7□□□□□ -0.54
LINC00240-203ENST00000606878 GSN-AS1Q9NRJ2 163 aa11.7□□□□□ -0.54
LINC00240-203ENST00000606878 K7EQM0 130 aa11.69□□□□□ -0.54
LINC00240-203ENST00000606878 KANTRA0A1W2PQU2 76 aa11.68□□□□□ -0.54
LINC00240-203ENST00000606878 GAGE12BA1L429 117 aa11.68□□□□□ -0.54
LINC00240-203ENST00000606878 GAGE7O76087 117 aa11.68□□□□□ -0.54
LINC00240-203ENST00000606878 GAGE12FP0CL80 117 aa11.68□□□□□ -0.54
LINC00240-203ENST00000606878 GAGE12GP0CL81 117 aa11.68□□□□□ -0.54
LINC00240-203ENST00000606878 GAGE12IP0CL82 117 aa11.68□□□□□ -0.54
LINC00240-203ENST00000606878 GNG5P63218 68 aa11.68□□□□□ -0.54
LINC00240-203ENST00000606878 ZNF726P1Q15940 193 aa11.68□□□□□ -0.54
LINC00240-203ENST00000606878 Q6ZQT7 251 aa11.68□□□□□ -0.54
LINC00240-203ENST00000606878 SSX7Q7RTT5 188 aa11.68□□□□□ -0.54
LINC00240-203ENST00000606878 LINC00612Q8N6U2 182 aa11.68□□□□□ -0.54
LINC00240-203ENST00000606878 C11orf72Q8NBR9 251 aa11.68□□□□□ -0.54
LINC00240-203ENST00000606878 TREM1Q9NP99 234 aa11.68□□□□□ -0.54
LINC00240-203ENST00000606878 EPDR1Q9UM22 224 aa11.68□□□□□ -0.54
LINC00240-203ENST00000606878 A0A1W2PRE2 83 aa11.67□□□□□ -0.54
LINC00240-203ENST00000606878 TCRAP04437 139 aa11.67□□□□□ -0.54
LINC00240-203ENST00000606878 EIF5AP63241 154 aaKnown RBP11.67□□□□□ -0.54
LINC00240-203ENST00000606878 Q6AWC8 147 aa11.67□□□□□ -0.54
LINC00240-203ENST00000606878 POM121L12Q8N7R1 296 aa11.67□□□□□ -0.54
LINC00240-203ENST00000606878 C15orf53Q8NAA6 179 aa11.67□□□□□ -0.54
LINC00240-203ENST00000606878 TRAV8-1A0A0A6YYK1 113 aa11.66□□□□□ -0.54
LINC00240-203ENST00000606878 SEC11BP0C7V7 166 aa11.66□□□□□ -0.54
LINC00240-203ENST00000606878 OR5I1Q13606 314 aa11.66□□□□□ -0.54
LINC00240-203ENST00000606878 IBA57Q5T440 356 aaKnown RBP11.66□□□□□ -0.54
LINC00240-203ENST00000606878 FAM159AQ6UWV7 190 aa11.66□□□□□ -0.54
LINC00240-203ENST00000606878 Q6ZTI0 123 aa11.66□□□□□ -0.54
LINC00240-203ENST00000606878 STOML3Q8TAV4 291 aa11.66□□□□□ -0.54
LINC00240-203ENST00000606878 NDFIP1Q9BT67 221 aa11.66□□□□□ -0.54
LINC00240-203ENST00000606878 ZNF471Q9BX82 626 aaPredicted RBP11.66□□□□□ -0.54
LINC00240-203ENST00000606878 NKX6-2Q9C056 277 aaPredicted RBP11.66□□□□□ -0.54
LINC00240-203ENST00000606878 TMPRSS5Q9H3S3 457 aa11.66□□□□□ -0.54
LINC00240-203ENST00000606878 TP53TG3Q9ULZ0 132 aa11.66□□□□□ -0.54
LINC00240-203ENST00000606878 KLF12Q9Y4X4 402 aa11.66□□□□□ -0.54
LINC00240-203ENST00000606878 TRGV2A0A075B6R0 118 aa11.65□□□□□ -0.54
LINC00240-203ENST00000606878 TRGV1A0A0A0MS02 117 aa11.65□□□□□ -0.54
LINC00240-203ENST00000606878 FBLL1A6NHQ2 334 aaKnown RBP11.65□□□□□ -0.54
LINC00240-203ENST00000606878 BCL2L11O43521 198 aa11.65□□□□□ -0.54
LINC00240-203ENST00000606878 PFDN1O60925 122 aa11.65□□□□□ -0.54
LINC00240-203ENST00000606878 IFNA7P01567 189 aa11.65□□□□□ -0.54
LINC00240-203ENST00000606878 FGF8P55075 233 aaPredicted RBP11.65□□□□□ -0.54
LINC00240-203ENST00000606878 TCL1AP56279 114 aa11.65□□□□□ -0.54
LINC00240-203ENST00000606878 MUC21Q5SSG8 566 aa11.65□□□□□ -0.54
LINC00240-203ENST00000606878 Q6ZNX1 250 aa11.65□□□□□ -0.54
LINC00240-203ENST00000606878 UBE2DNLQ8IWF7 75 aa11.65□□□□□ -0.54
LINC00240-203ENST00000606878 TVP23CQ96ET8 276 aa11.65□□□□□ -0.54
LINC00240-203ENST00000606878 SGK494Q96LW2 274 aa11.65□□□□□ -0.54
LINC00240-203ENST00000606878 PSG8Q9UQ74 426 aa11.65□□□□□ -0.54
LINC00240-203ENST00000606878 TRAV21A0A0B4J279 112 aa11.64□□□□□ -0.55
LINC00240-203ENST00000606878 MAP1LC3B2A6NCE7 125 aa11.64□□□□□ -0.55
LINC00240-203ENST00000606878 GGTLC3B5MD39 225 aa11.64□□□□□ -0.55
LINC00240-203ENST00000606878 UMAD1C9J7I0 102 aa11.64□□□□□ -0.55
LINC00240-203ENST00000606878 LGALS9BQ3B8N2 356 aa11.64□□□□□ -0.55
LINC00240-203ENST00000606878 TMUB2Q71RG4 321 aa11.64□□□□□ -0.55
LINC00240-203ENST00000606878 CYB561D1Q8N8Q1 229 aa11.64□□□□□ -0.55
LINC00240-203ENST00000606878 MAP1LC3BQ9GZQ8 125 aa11.64□□□□□ -0.55
LINC00240-203ENST00000606878 SPINK4O60575 86 aa11.63□□□□□ -0.55
LINC00240-203ENST00000606878 NUDT3O95989 172 aa11.63□□□□□ -0.55
LINC00240-203ENST00000606878 UBE2G2P60604 165 aa11.63□□□□□ -0.55
LINC00240-203ENST00000606878 ZNF415Q09FC8 603 aa11.63□□□□□ -0.55
LINC00240-203ENST00000606878 RNF212Q495C1 297 aa11.63□□□□□ -0.55
LINC00240-203ENST00000606878 C18orf15Q96N68 181 aa11.63□□□□□ -0.55
LINC00240-203ENST00000606878 ATG101Q9BSB4 218 aa11.63□□□□□ -0.55
LINC00240-203ENST00000606878 TRGV11A0A075B6L2 103 aa11.62□□□□□ -0.55
LINC00240-203ENST00000606878 PPT1P50897 306 aa11.62□□□□□ -0.55
LINC00240-203ENST00000606878 FLI1Q01543 452 aaPredicted RBP11.62□□□□□ -0.55
LINC00240-203ENST00000606878 TMEM183BQ1AE95 376 aa11.62□□□□□ -0.55
LINC00240-203ENST00000606878 TDRG1Q3Y452 100 aa11.62□□□□□ -0.55
LINC00240-203ENST00000606878 SAPCD1Q5SSQ6 148 aa11.62□□□□□ -0.55
LINC00240-203ENST00000606878 PRNTQ86SH4 94 aa11.62□□□□□ -0.55
LINC00240-203ENST00000606878 TMEM183AQ8IXX5 376 aa11.62□□□□□ -0.55
LINC00240-203ENST00000606878 TCTE3Q8IZS6 198 aa11.62□□□□□ -0.55
LINC00240-203ENST00000606878 MDFICQ9P1T7 246 aa11.62□□□□□ -0.55
LINC00240-203ENST00000606878 NAGKQ9UJ70 344 aa11.62□□□□□ -0.55
LINC00240-203ENST00000606878 TRAV26-1A0A087WT03 109 aa11.61□□□□□ -0.55
LINC00240-203ENST00000606878 FAM74A7A6NL05 159 aa11.61□□□□□ -0.55
LINC00240-203ENST00000606878 F6UZH7 168 aa11.61□□□□□ -0.55
LINC00240-203ENST00000606878 IGLV2-11P01706 119 aa11.61□□□□□ -0.55
LINC00240-203ENST00000606878 TPT1P13693 172 aaKnown RBP11.61□□□□□ -0.55
LINC00240-203ENST00000606878 FHITP49789 147 aa11.61□□□□□ -0.55
LINC00240-203ENST00000606878 TMEM75Q8N9X5 138 aa11.61□□□□□ -0.55
LINC00240-203ENST00000606878 SFT2D1Q8WV19 159 aa11.61□□□□□ -0.55
LINC00240-203ENST00000606878 MBD3L1Q8WWY6 194 aa11.61□□□□□ -0.55
LINC00240-203ENST00000606878 KCNS1Q96KK3 526 aa11.61□□□□□ -0.55
LINC00240-203ENST00000606878 SPXQ9BT56 116 aa11.61□□□□□ -0.55
LINC00240-203ENST00000606878 HYDINQ4G0P3 5121 aa11.6□□□□□ -0.55
LINC00240-203ENST00000606878 GNRH2O43555 120 aa11.6□□□□□ -0.55
LINC00240-203ENST00000606878 HOXA5P20719 270 aa11.6□□□□□ -0.55
LINC00240-203ENST00000606878 ZFP69Q49AA0 526 aa11.6□□□□□ -0.55
LINC00240-203ENST00000606878 DPPA3Q6W0C5 159 aa11.6□□□□□ -0.55
LINC00240-203ENST00000606878 FAM213BQ8TBF2 198 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms