RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 TMEM75Q8N9X5 138 aa10.28□□□□□ -0.76
CTSA-211ENST00000606066 C11orf45Q8TAV5 145 aa10.28□□□□□ -0.76
CTSA-211ENST00000606066 PYGO2Q9BRQ0 406 aa10.28□□□□□ -0.76
CTSA-211ENST00000606066 TRAV8-1A0A0A6YYK1 113 aa10.27□□□□□ -0.77
CTSA-211ENST00000606066 ZNF705GA8MUZ8 300 aaPredicted RBP10.27□□□□□ -0.77
CTSA-211ENST00000606066 PEX7O00628 323 aa10.27□□□□□ -0.77
CTSA-211ENST00000606066 HTN1P15515 57 aa10.27□□□□□ -0.77
CTSA-211ENST00000606066 BLOC1S1P78537 153 aa10.27□□□□□ -0.77
CTSA-211ENST00000606066 BTN1A1Q13410 526 aa10.27□□□□□ -0.77
CTSA-211ENST00000606066 TREM1Q9NP99 234 aa10.27□□□□□ -0.77
CTSA-211ENST00000606066 MANBALQ9NQG1 85 aa10.27□□□□□ -0.77
CTSA-211ENST00000606066 PSG8Q9UQ74 426 aa10.27□□□□□ -0.77
CTSA-211ENST00000606066 TEX48A0A1B0GUV7 120 aa10.26□□□□□ -0.77
CTSA-211ENST00000606066 CXorf65A6NEN9 183 aa10.26□□□□□ -0.77
CTSA-211ENST00000606066 ZNF324O75467 553 aaPredicted RBP10.26□□□□□ -0.77
CTSA-211ENST00000606066 IFNA1P01562 189 aa10.26□□□□□ -0.77
CTSA-211ENST00000606066 SPART-AS1P0CW21 52 aa10.26□□□□□ -0.77
CTSA-211ENST00000606066 EMP1P54849 157 aa10.26□□□□□ -0.77
CTSA-211ENST00000606066 FLI1Q01543 452 aaPredicted RBP10.26□□□□□ -0.77
CTSA-211ENST00000606066 SAPCD1Q5SSQ6 148 aa10.26□□□□□ -0.77
CTSA-211ENST00000606066 ZNF493Q6ZR52 646 aa10.26□□□□□ -0.77
CTSA-211ENST00000606066 C16orf74Q96GX8 76 aa10.26□□□□□ -0.77
CTSA-211ENST00000606066 GNG13Q9P2W3 67 aa10.26□□□□□ -0.77
CTSA-211ENST00000606066 ATP5G3P48201 142 aa10.25□□□□□ -0.77
CTSA-211ENST00000606066 CCL20P78556 96 aa10.25□□□□□ -0.77
CTSA-211ENST00000606066 PRNTQ86SH4 94 aa10.25□□□□□ -0.77
CTSA-211ENST00000606066 SGK494Q96LW2 274 aa10.25□□□□□ -0.77
CTSA-211ENST00000606066 TXNDC17Q9BRA2 123 aa10.25□□□□□ -0.77
CTSA-211ENST00000606066 C11orf94C9JXX5 98 aa10.24□□□□□ -0.77
CTSA-211ENST00000606066 RGS13O14921 159 aa10.24□□□□□ -0.77
CTSA-211ENST00000606066 PMS2P11Q13670 270 aa10.24□□□□□ -0.77
CTSA-211ENST00000606066 PRR9Q5T870 116 aa10.24□□□□□ -0.77
CTSA-211ENST00000606066 TMEM263Q8WUH6 116 aaKnown RBP10.24□□□□□ -0.77
CTSA-211ENST00000606066 FMC1Q96HJ9 113 aa10.24□□□□□ -0.77
CTSA-211ENST00000606066 LINC00467Q9BRT7 94 aa10.24□□□□□ -0.77
CTSA-211ENST00000606066 TRAV21A0A0B4J279 112 aa10.23□□□□□ -0.77
CTSA-211ENST00000606066 CBY3A6NI87 242 aa10.23□□□□□ -0.77
CTSA-211ENST00000606066 IGLV2-11P01706 119 aa10.23□□□□□ -0.77
CTSA-211ENST00000606066 PRM2P04554 102 aa10.23□□□□□ -0.77
CTSA-211ENST00000606066 S100A9P06702 114 aaKnown RBP10.23□□□□□ -0.77
CTSA-211ENST00000606066 AZU1P20160 251 aa10.23□□□□□ -0.77
CTSA-211ENST00000606066 TAGLN2P37802 199 aaKnown RBP10.23□□□□□ -0.77
CTSA-211ENST00000606066 NANOS2P60321 138 aaKnown RBP10.23□□□□□ -0.77
CTSA-211ENST00000606066 UBE2G1P62253 170 aa10.23□□□□□ -0.77
CTSA-211ENST00000606066 Q6AWC8 147 aa10.23□□□□□ -0.77
CTSA-211ENST00000606066 EIF4E3Q8N5X7 224 aaKnown RBP10.23□□□□□ -0.77
CTSA-211ENST00000606066 ZNF680Q8NEM1 530 aa10.23□□□□□ -0.77
CTSA-211ENST00000606066 TVP23CQ96ET8 276 aa10.23□□□□□ -0.77
CTSA-211ENST00000606066 LINC00479Q96M42 142 aa10.23□□□□□ -0.77
CTSA-211ENST00000606066 IGHV1OR15-1A0A075B7D0 117 aa10.22□□□□□ -0.77
CTSA-211ENST00000606066 TRAV34A0A0B4J273 112 aa10.22□□□□□ -0.77
CTSA-211ENST00000606066 LYRM9A8MSI8 78 aa10.22□□□□□ -0.77
CTSA-211ENST00000606066 AKR1C3P42330 323 aa10.22□□□□□ -0.77
CTSA-211ENST00000606066 ANXA2RQ3ZCQ2 193 aa10.22□□□□□ -0.77
CTSA-211ENST00000606066 SMUG1Q53HV7 270 aa10.22□□□□□ -0.77
CTSA-211ENST00000606066 FAM222AQ5U5X8 452 aa10.22□□□□□ -0.77
CTSA-211ENST00000606066 ZFAND6Q6FIF0 208 aa10.22□□□□□ -0.77
CTSA-211ENST00000606066 FAM159AQ6UWV7 190 aa10.22□□□□□ -0.77
CTSA-211ENST00000606066 RNASE8Q8TDE3 154 aaKnown RBP10.22□□□□□ -0.77
CTSA-211ENST00000606066 DKK2Q9UBU2 259 aa10.22□□□□□ -0.77
CTSA-211ENST00000606066 ZFP30Q9Y2G7 519 aa10.22□□□□□ -0.77
CTSA-211ENST00000606066 KLF12Q9Y4X4 402 aa10.22□□□□□ -0.77
CTSA-211ENST00000606066 TIMM8BQ9Y5J9 83 aaPredicted RBP10.22□□□□□ -0.77
CTSA-211ENST00000606066 TRBV6-1A0A0K0K1D8 114 aa10.21□□□□□ -0.77
CTSA-211ENST00000606066 NUPR2A6NF83 97 aa10.21□□□□□ -0.77
CTSA-211ENST00000606066 SNURFLB1AK76 121 aa10.21□□□□□ -0.77
CTSA-211ENST00000606066 TMEM183BQ1AE95 376 aa10.21□□□□□ -0.77
CTSA-211ENST00000606066 VAX2Q9UIW0 290 aa10.21□□□□□ -0.77
CTSA-211ENST00000606066 CELA1Q9UNI1 258 aa10.21□□□□□ -0.77
CTSA-211ENST00000606066 PDE6DO43924 150 aa10.2□□□□□ -0.78
CTSA-211ENST00000606066 GCGP01275 180 aa10.2□□□□□ -0.78
CTSA-211ENST00000606066 BCL2P10415 239 aa10.2□□□□□ -0.78
CTSA-211ENST00000606066 MEF2BQ02080 365 aaPredicted RBP10.2□□□□□ -0.78
CTSA-211ENST00000606066 TEX261Q6UWH6 196 aa10.2□□□□□ -0.78
CTSA-211ENST00000606066 Q86TA4 180 aa10.2□□□□□ -0.78
CTSA-211ENST00000606066 PHLDA1Q8WV24 401 aaPredicted RBP10.2□□□□□ -0.78
CTSA-211ENST00000606066 SCO2A0A1W2PP80 73 aa10.19□□□□□ -0.78
CTSA-211ENST00000606066 PLAC8L1A1L4L8 177 aa10.19□□□□□ -0.78
CTSA-211ENST00000606066 PFN1P07737 140 aaKnown RBP10.19□□□□□ -0.78
CTSA-211ENST00000606066 C12orf74Q32Q52 190 aa10.19□□□□□ -0.78
CTSA-211ENST00000606066 MUC21Q5SSG8 566 aa10.19□□□□□ -0.78
CTSA-211ENST00000606066 IBA57Q5T440 356 aaKnown RBP10.19□□□□□ -0.78
CTSA-211ENST00000606066 CEMP1Q6PRD7 247 aaPredicted RBP10.19□□□□□ -0.78
CTSA-211ENST00000606066 LYPD6BQ8NI32 183 aa10.19□□□□□ -0.78
CTSA-211ENST00000606066 C2CD4CQ8TF44 421 aa10.19□□□□□ -0.78
CTSA-211ENST00000606066 KCNS1Q96KK3 526 aa10.19□□□□□ -0.78
CTSA-211ENST00000606066 C8orf49Q96NF6 230 aa10.19□□□□□ -0.78
CTSA-211ENST00000606066 NAGKQ9UJ70 344 aa10.19□□□□□ -0.78
CTSA-211ENST00000606066 KLK5Q9Y337 293 aaPredicted RBP10.19□□□□□ -0.78
CTSA-211ENST00000606066 TRGV11A0A075B6L2 103 aa10.18□□□□□ -0.78
CTSA-211ENST00000606066 TRAV10A0A0B4J240 114 aa10.18□□□□□ -0.78
CTSA-211ENST00000606066 LTAP01374 205 aa10.18□□□□□ -0.78
CTSA-211ENST00000606066 DAD1P61803 113 aa10.18□□□□□ -0.78
CTSA-211ENST00000606066 TDRG1Q3Y452 100 aa10.18□□□□□ -0.78
CTSA-211ENST00000606066 Q6ZQT7 251 aa10.18□□□□□ -0.78
CTSA-211ENST00000606066 Q6ZTC4 211 aa10.18□□□□□ -0.78
CTSA-211ENST00000606066 C11orf52Q96A22 123 aa10.18□□□□□ -0.78
CTSA-211ENST00000606066 NOP10Q9NPE3 64 aaKnown RBP10.18□□□□□ -0.78
CTSA-211ENST00000606066 FABP5P3A8MUU1 101 aa10.17□□□□□ -0.78
CTSA-211ENST00000606066 ZNF80P51504 273 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms