RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 TCL1AP56279 114 aa8.15□□□□□ -1.1
CCDC12-209ENST00000604164 ZNF415Q09FC8 603 aa8.15□□□□□ -1.1
CCDC12-209ENST00000604164 ZNF345Q14585 488 aa8.15□□□□□ -1.1
CCDC12-209ENST00000604164 GOLT1AQ6ZVE7 132 aa8.15□□□□□ -1.1
CCDC12-209ENST00000604164 SUN5Q8TC36 379 aa8.15□□□□□ -1.1
CCDC12-209ENST00000604164 NKX6-2Q9C056 277 aaPredicted RBP8.15□□□□□ -1.1
CCDC12-209ENST00000604164 ALMS1Q8TCU4 4167 aa8.15□□□□□ -1.11
CCDC12-209ENST00000604164 SACSQ9NZJ4 4579 aa8.14□□□□□ -1.11
CCDC12-209ENST00000604164 TRGV11A0A075B6L2 103 aa8.14□□□□□ -1.11
CCDC12-209ENST00000604164 A0A0D9SG52 128 aa8.14□□□□□ -1.11
CCDC12-209ENST00000604164 CTXND1A0A1B0GTU2 59 aa8.14□□□□□ -1.11
CCDC12-209ENST00000604164 HMSDA8MTL9 139 aa8.14□□□□□ -1.11
CCDC12-209ENST00000604164 EIF5AP63241 154 aaKnown RBP8.14□□□□□ -1.11
CCDC12-209ENST00000604164 LGALS9BQ3B8N2 356 aa8.14□□□□□ -1.11
CCDC12-209ENST00000604164 Q6AWC8 147 aa8.14□□□□□ -1.11
CCDC12-209ENST00000604164 FAM159AQ6UWV7 190 aa8.14□□□□□ -1.11
CCDC12-209ENST00000604164 IQCF2Q8IXL9 164 aa8.14□□□□□ -1.11
CCDC12-209ENST00000604164 C11orf72Q8NBR9 251 aa8.14□□□□□ -1.11
CCDC12-209ENST00000604164 C18orf15Q96N68 181 aa8.14□□□□□ -1.11
CCDC12-209ENST00000604164 ATG101Q9BSB4 218 aa8.14□□□□□ -1.11
CCDC12-209ENST00000604164 GSN-AS1Q9NRJ2 163 aa8.14□□□□□ -1.11
CCDC12-209ENST00000604164 TRGV1A0A0A0MS02 117 aa8.13□□□□□ -1.11
CCDC12-209ENST00000604164 TRAV21A0A0B4J279 112 aa8.13□□□□□ -1.11
CCDC12-209ENST00000604164 A0A1W2PRE2 83 aa8.13□□□□□ -1.11
CCDC12-209ENST00000604164 G3V3Q6 166 aa8.13□□□□□ -1.11
CCDC12-209ENST00000604164 H3BNG1 76 aa8.13□□□□□ -1.11
CCDC12-209ENST00000604164 EIF3GO75821 320 aaKnown RBP eCLIP8.13□□□□□ -1.11
CCDC12-209ENST00000604164 CCL18P55774 89 aa8.13□□□□□ -1.11
CCDC12-209ENST00000604164 OR5I1Q13606 314 aa8.13□□□□□ -1.11
CCDC12-209ENST00000604164 KCNRGQ8N5I3 272 aa8.13□□□□□ -1.11
CCDC12-209ENST00000604164 STOML3Q8TAV4 291 aa8.13□□□□□ -1.11
CCDC12-209ENST00000604164 TREM1Q9NP99 234 aa8.13□□□□□ -1.11
CCDC12-209ENST00000604164 KANTRA0A1W2PQU2 76 aa8.12□□□□□ -1.11
CCDC12-209ENST00000604164 NUDT3O95989 172 aa8.12□□□□□ -1.11
CCDC12-209ENST00000604164 TCRAP04437 139 aa8.12□□□□□ -1.11
CCDC12-209ENST00000604164 PPT1P50897 306 aa8.12□□□□□ -1.11
CCDC12-209ENST00000604164 SUMO1P63165 101 aaKnown RBP8.12□□□□□ -1.11
CCDC12-209ENST00000604164 ZFP69Q49AA0 526 aa8.12□□□□□ -1.11
CCDC12-209ENST00000604164 PRR9Q5T870 116 aa8.12□□□□□ -1.11
CCDC12-209ENST00000604164 Q6ZTI0 123 aa8.12□□□□□ -1.11
CCDC12-209ENST00000604164 CYB561D1Q8N8Q1 229 aa8.12□□□□□ -1.11
CCDC12-209ENST00000604164 KCNS1Q96KK3 526 aa8.12□□□□□ -1.11
CCDC12-209ENST00000604164 SPXQ9BT56 116 aa8.12□□□□□ -1.11
CCDC12-209ENST00000604164 EPDR1Q9UM22 224 aa8.12□□□□□ -1.11
CCDC12-209ENST00000604164 KLF12Q9Y4X4 402 aa8.12□□□□□ -1.11
CCDC12-209ENST00000604164 UMAD1C9J7I0 102 aa8.11□□□□□ -1.11
CCDC12-209ENST00000604164 SPINK4O60575 86 aa8.11□□□□□ -1.11
CCDC12-209ENST00000604164 GNG5P63218 68 aa8.11□□□□□ -1.11
CCDC12-209ENST00000604164 SLAQ13239 276 aa8.11□□□□□ -1.11
CCDC12-209ENST00000604164 TDRG1Q3Y452 100 aa8.11□□□□□ -1.11
CCDC12-209ENST00000604164 SAPCD1Q5SSQ6 148 aa8.11□□□□□ -1.11
CCDC12-209ENST00000604164 TMEM75Q8N9X5 138 aa8.11□□□□□ -1.11
CCDC12-209ENST00000604164 CYTL1Q9NRR1 136 aa8.11□□□□□ -1.11
CCDC12-209ENST00000604164 TRAV26-1A0A087WT03 109 aa8.1□□□□□ -1.11
CCDC12-209ENST00000604164 MAP1LC3B2A6NCE7 125 aa8.1□□□□□ -1.11
CCDC12-209ENST00000604164 F6UZH7 168 aa8.1□□□□□ -1.11
CCDC12-209ENST00000604164 SMLR1H3BR10 107 aa8.1□□□□□ -1.11
CCDC12-209ENST00000604164 IFNA7P01567 189 aa8.1□□□□□ -1.11
CCDC12-209ENST00000604164 SEC11BP0C7V7 166 aa8.1□□□□□ -1.11
CCDC12-209ENST00000604164 MUC21Q5SSG8 566 aa8.1□□□□□ -1.11
CCDC12-209ENST00000604164 LINC00336Q6ZUF6 198 aa8.1□□□□□ -1.11
CCDC12-209ENST00000604164 TCEAL7Q9BRU2 100 aa8.1□□□□□ -1.11
CCDC12-209ENST00000604164 MAP1LC3BQ9GZQ8 125 aa8.1□□□□□ -1.11
CCDC12-209ENST00000604164 TMPRSS5Q9H3S3 457 aa8.1□□□□□ -1.11
CCDC12-209ENST00000604164 SDF2L1Q9HCN8 221 aa8.1□□□□□ -1.11
CCDC12-209ENST00000604164 NAGKQ9UJ70 344 aa8.1□□□□□ -1.11
CCDC12-209ENST00000604164 TP53TG3Q9ULZ0 132 aa8.1□□□□□ -1.11
CCDC12-209ENST00000604164 DNAH1Q9P2D7 4330 aa8.1□□□□□ -1.11
CCDC12-209ENST00000604164 PLECQ15149 4684 aaKnown RBP8.09□□□□□ -1.11
CCDC12-209ENST00000604164 TRAV8-1A0A0A6YYK1 113 aa8.09□□□□□ -1.11
CCDC12-209ENST00000604164 GGTLC3B5MD39 225 aa8.09□□□□□ -1.11
CCDC12-209ENST00000604164 BCL2L11O43521 198 aa8.09□□□□□ -1.11
CCDC12-209ENST00000604164 PFDN1O60925 122 aa8.09□□□□□ -1.11
CCDC12-209ENST00000604164 FLI1Q01543 452 aaPredicted RBP8.09□□□□□ -1.11
CCDC12-209ENST00000604164 ZNF726P1Q15940 193 aa8.09□□□□□ -1.11
CCDC12-209ENST00000604164 TMEM183BQ1AE95 376 aa8.09□□□□□ -1.11
CCDC12-209ENST00000604164 SMUG1Q53HV7 270 aa8.09□□□□□ -1.11
CCDC12-209ENST00000604164 SOHLH1Q5JUK2 328 aa8.09□□□□□ -1.11
CCDC12-209ENST00000604164 DPPA3Q6W0C5 159 aa8.09□□□□□ -1.11
CCDC12-209ENST00000604164 TMEM183AQ8IXX5 376 aa8.09□□□□□ -1.11
CCDC12-209ENST00000604164 HIST1H2BAQ96A08 127 aa8.09□□□□□ -1.11
CCDC12-209ENST00000604164 ZNF471Q9BX82 626 aaPredicted RBP8.09□□□□□ -1.11
CCDC12-209ENST00000604164 PSG8Q9UQ74 426 aa8.09□□□□□ -1.11
CCDC12-209ENST00000604164 ARL2-SNX15V9GYD0 113 aa8.09□□□□□ -1.11
CCDC12-209ENST00000604164 FHITP49789 147 aa8.08□□□□□ -1.12
CCDC12-209ENST00000604164 EIF5AL1Q6IS14 154 aaKnown RBP8.08□□□□□ -1.12
CCDC12-209ENST00000604164 SSX7Q7RTT5 188 aa8.08□□□□□ -1.12
CCDC12-209ENST00000604164 PRNTQ86SH4 94 aa8.08□□□□□ -1.12
CCDC12-209ENST00000604164 MRPL16Q9NX20 251 aaKnown RBP8.08□□□□□ -1.12
CCDC12-209ENST00000604164 A0A0J9YY99 117 aa8.07□□□□□ -1.12
CCDC12-209ENST00000604164 FAM74A7A6NL05 159 aa8.07□□□□□ -1.12
CCDC12-209ENST00000604164 M0R2P5 195 aa8.07□□□□□ -1.12
CCDC12-209ENST00000604164 PEX7O00628 323 aa8.07□□□□□ -1.12
CCDC12-209ENST00000604164 PFN1P07737 140 aaKnown RBP8.07□□□□□ -1.12
CCDC12-209ENST00000604164 TPT1P13693 172 aaKnown RBP8.07□□□□□ -1.12
CCDC12-209ENST00000604164 HOXA5P20719 270 aa8.07□□□□□ -1.12
CCDC12-209ENST00000604164 FGF8P55075 233 aaPredicted RBP8.07□□□□□ -1.12
CCDC12-209ENST00000604164 UBE2G2P60604 165 aa8.07□□□□□ -1.12
CCDC12-209ENST00000604164 LGALSLQ3ZCW2 172 aaPredicted RBP8.07□□□□□ -1.12
CCDC12-209ENST00000604164 Q6ZQT7 251 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms