RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 HLA-DOBP13765 273 aa2.25□□□□□ -2.05
VCAM1-205ENST00000603679 FOXG1P55316 489 aaPredicted RBP2.25□□□□□ -2.05
VCAM1-205ENST00000603679 HIST1H4AP62805 103 aaKnown RBP2.25□□□□□ -2.05
VCAM1-205ENST00000603679 EIF4EBP1Q13541 118 aaPredicted RBP2.25□□□□□ -2.05
VCAM1-205ENST00000603679 DAND5Q8N907 189 aa2.25□□□□□ -2.05
VCAM1-205ENST00000603679 OR52P1PQ8NH57 321 aa2.25□□□□□ -2.05
VCAM1-205ENST00000603679 PGLYRP4Q96LB8 373 aa2.25□□□□□ -2.05
VCAM1-205ENST00000603679 DSCR8Q96T75 97 aa2.25□□□□□ -2.05
VCAM1-205ENST00000603679 PARLQ9H300 379 aa2.25□□□□□ -2.05
VCAM1-205ENST00000603679 SIGLEC7Q9Y286 467 aa2.25□□□□□ -2.05
VCAM1-205ENST00000603679 YTHDF2Q9Y5A9 579 aaKnown RBP2.25□□□□□ -2.05
VCAM1-205ENST00000603679 HILPDAQ9Y5L2 63 aa2.25□□□□□ -2.05
VCAM1-205ENST00000603679 OOSP1A8MZH6 123 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 ZNF736B4DX44 427 aaPredicted RBP2.24□□□□□ -2.05
VCAM1-205ENST00000603679 C12orf77C9JDV5 145 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 CST7O76096 145 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 NDUFB8O95169 186 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 SFTA3P0C7M3 94 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 CGB3P0DN86 165 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 CGB7P0DN87 165 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 CRIP2P52943 208 aaPredicted RBP2.24□□□□□ -2.05
VCAM1-205ENST00000603679 BRWD1-AS2P59051 145 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 SNRPD3P62318 126 aaKnown RBP2.24□□□□□ -2.05
VCAM1-205ENST00000603679 ZNF260Q3ZCT1 412 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 LINC00322Q6ZN03 302 aaPredicted RBP2.24□□□□□ -2.05
VCAM1-205ENST00000603679 FAM19A3Q7Z5A8 133 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 H1FOOQ8IZA3 346 aaPredicted RBP2.24□□□□□ -2.05
VCAM1-205ENST00000603679 TMEM61Q8N0U2 210 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 COPS9Q8WXC6 57 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 PRELID3AQ96N28 172 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 TTTY13Q9BZ97 58 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 KLK11Q9UBX7 282 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 RNF114Q9Y508 228 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 TENM1Q9UKZ4 2725 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 A0A1W2PS18 150 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 GGTLC3B5MD39 225 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 MRPS12O15235 138 aaKnown RBP2.24□□□□□ -2.05
VCAM1-205ENST00000603679 SYNGR2O43760 224 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 MT-ATP8P03928 68 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 CNTFRP26992 372 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 NDUFV3P56181 108 aaKnown RBP2.24□□□□□ -2.05
VCAM1-205ENST00000603679 TMEM258P61165 79 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 MPV17LQ2QL34 196 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 C1orf194Q5T5A4 169 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 TMEM78Q5T7P6 136 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 UNQ9370/PRO34162Q6UXP9 181 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 RNF182Q8N6D2 247 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 CLDND2Q8NHS1 167 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 NXT2Q9NPJ8 142 aaKnown RBP2.24□□□□□ -2.05
VCAM1-205ENST00000603679 MMP26Q9NRE1 261 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 OSTCQ9NRP0 149 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 TP53TG1Q9Y2A0 90 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 KLK5Q9Y337 293 aaPredicted RBP2.24□□□□□ -2.05
VCAM1-205ENST00000603679 VWFP04275 2813 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 IGHV1-69DA0A0B4J2H0 117 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 C3orf85A0A1B0GTC6 90 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 CFDP00746 253 aaPredicted RBP2.24□□□□□ -2.05
VCAM1-205ENST00000603679 TRGC1P0CF51 173 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 IGHV4-38-2P0DP08 117 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 PYYP10082 97 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 IGFBP3P17936 291 aaPredicted RBP2.24□□□□□ -2.05
VCAM1-205ENST00000603679 FCGR2CP31995 323 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 CKS2P33552 79 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 MFAP2P55001 183 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 FOXF1Q12946 379 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 ZNF718Q3SXZ3 478 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 LINC00242Q5T6M2 205 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 SCGB1D4Q6XE38 83 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 C6orf201Q7Z4U5 140 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 TMEM179BQ7Z7N9 219 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 OR8A1Q8NGG7 326 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 MRPS24Q96EL2 167 aaKnown RBP2.24□□□□□ -2.05
VCAM1-205ENST00000603679 HIST1H2BLQ99880 126 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 PARP12Q9H0J9 701 aaKnown RBP2.24□□□□□ -2.05
VCAM1-205ENST00000603679 NAA60Q9H7X0 242 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 LINC00527Q9UJ94 153 aa2.24□□□□□ -2.05
VCAM1-205ENST00000603679 IGLV5-45A0A087WSX0 123 aa2.23□□□□□ -2.05
VCAM1-205ENST00000603679 IGKV1D-8A0A087WSZ0 117 aa2.23□□□□□ -2.05
VCAM1-205ENST00000603679 TRAV26-2A0A0B4J265 109 aa2.23□□□□□ -2.05
VCAM1-205ENST00000603679 LOC389332A0A1B0GUA5 103 aa2.23□□□□□ -2.05
VCAM1-205ENST00000603679 RER1O15258 196 aa2.23□□□□□ -2.05
VCAM1-205ENST00000603679 FRMD6-AS1P0C7T7 363 aa2.23□□□□□ -2.05
VCAM1-205ENST00000603679 SLC25A6P12236 298 aa2.23□□□□□ -2.05
VCAM1-205ENST00000603679 PIPP12273 146 aaPredicted RBP2.23□□□□□ -2.05
VCAM1-205ENST00000603679 ETV6P41212 452 aa2.23□□□□□ -2.05
VCAM1-205ENST00000603679 NMUP48645 174 aa2.23□□□□□ -2.05
VCAM1-205ENST00000603679 NPC2P61916 151 aa2.23□□□□□ -2.05
VCAM1-205ENST00000603679 ZNF85Q03923 595 aa2.23□□□□□ -2.05
VCAM1-205ENST00000603679 HMGN3Q15651 99 aa2.23□□□□□ -2.05
VCAM1-205ENST00000603679 ZNF726P1Q15940 193 aa2.23□□□□□ -2.05
VCAM1-205ENST00000603679 GLYATL3Q5SZD4 288 aa2.23□□□□□ -2.05
VCAM1-205ENST00000603679 C9orf85Q96MD7 179 aa2.23□□□□□ -2.05
VCAM1-205ENST00000603679 DUSP21Q9H596 190 aa2.23□□□□□ -2.05
VCAM1-205ENST00000603679 FREM1Q5H8C1 2179 aa2.23□□□□□ -2.05
VCAM1-205ENST00000603679 IGKV1D-43A0A0B4J1Z2 117 aa2.23□□□□□ -2.05
VCAM1-205ENST00000603679 ZFP92A6NM28 416 aa2.23□□□□□ -2.05
VCAM1-205ENST00000603679 LYRM1O43325 122 aa2.23□□□□□ -2.05
VCAM1-205ENST00000603679 UBL3O95164 117 aa2.23□□□□□ -2.05
VCAM1-205ENST00000603679 NMBP08949 121 aa2.23□□□□□ -2.05
VCAM1-205ENST00000603679 C8orf88P0DMB2 117 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms