RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 HIST1H2BAQ96A08 127 aa11.49□□□□□ -0.57
PPFIA3-213ENST00000602905 TCEAL7Q9BRU2 100 aa11.49□□□□□ -0.57
PPFIA3-213ENST00000602905 TREM1Q9NP99 234 aa11.49□□□□□ -0.57
PPFIA3-213ENST00000602905 CELA1Q9UNI1 258 aa11.49□□□□□ -0.57
PPFIA3-213ENST00000602905 TRAV8-1A0A0A6YYK1 113 aa11.48□□□□□ -0.57
PPFIA3-213ENST00000602905 CBY3A6NI87 242 aa11.48□□□□□ -0.57
PPFIA3-213ENST00000602905 LYRM9A8MSI8 78 aa11.48□□□□□ -0.57
PPFIA3-213ENST00000602905 PEX7O00628 323 aa11.48□□□□□ -0.57
PPFIA3-213ENST00000602905 ZNF324O75467 553 aaPredicted RBP11.48□□□□□ -0.57
PPFIA3-213ENST00000602905 AZU1P20160 251 aa11.48□□□□□ -0.57
PPFIA3-213ENST00000602905 NKX2-5P52952 324 aaPredicted RBP11.48□□□□□ -0.57
PPFIA3-213ENST00000602905 FLI1Q01543 452 aaPredicted RBP11.48□□□□□ -0.57
PPFIA3-213ENST00000602905 CEMP1Q6PRD7 247 aaPredicted RBP11.48□□□□□ -0.57
PPFIA3-213ENST00000602905 EIF4E3Q8N5X7 224 aaKnown RBP11.48□□□□□ -0.57
PPFIA3-213ENST00000602905 TMEM75Q8N9X5 138 aa11.48□□□□□ -0.57
PPFIA3-213ENST00000602905 SGK494Q96LW2 274 aa11.48□□□□□ -0.57
PPFIA3-213ENST00000602905 DKK2Q9UBU2 259 aa11.48□□□□□ -0.57
PPFIA3-213ENST00000602905 PSG8Q9UQ74 426 aa11.48□□□□□ -0.57
PPFIA3-213ENST00000602905 TRAV10A0A0B4J240 114 aa11.47□□□□□ -0.57
PPFIA3-213ENST00000602905 SNURFLB1AK76 121 aa11.47□□□□□ -0.57
PPFIA3-213ENST00000602905 PAGE4O60829 102 aa11.47□□□□□ -0.57
PPFIA3-213ENST00000602905 PRNTQ86SH4 94 aa11.47□□□□□ -0.57
PPFIA3-213ENST00000602905 ZNF680Q8NEM1 530 aa11.47□□□□□ -0.57
PPFIA3-213ENST00000602905 TIMM8BQ9Y5J9 83 aaPredicted RBP11.47□□□□□ -0.57
PPFIA3-213ENST00000602905 TRAV1-1A0A0B4J248 108 aa11.46□□□□□ -0.57
PPFIA3-213ENST00000602905 DAD1P61803 113 aa11.46□□□□□ -0.57
PPFIA3-213ENST00000602905 C12orf74Q32Q52 190 aa11.46□□□□□ -0.57
PPFIA3-213ENST00000602905 SAPCD1Q5SSQ6 148 aa11.46□□□□□ -0.57
PPFIA3-213ENST00000602905 PRR9Q5T870 116 aa11.46□□□□□ -0.57
PPFIA3-213ENST00000602905 Q6AWC8 147 aa11.46□□□□□ -0.57
PPFIA3-213ENST00000602905 Q6ZTC4 211 aa11.46□□□□□ -0.57
PPFIA3-213ENST00000602905 ZNF767PQ75MW2 155 aa11.46□□□□□ -0.57
PPFIA3-213ENST00000602905 RNASE8Q8TDE3 154 aaKnown RBP11.46□□□□□ -0.57
PPFIA3-213ENST00000602905 LINC00467Q9BRT7 94 aa11.46□□□□□ -0.57
PPFIA3-213ENST00000602905 MANBALQ9NQG1 85 aa11.46□□□□□ -0.57
PPFIA3-213ENST00000602905 IGHV1OR15-1A0A075B7D0 117 aa11.45□□□□□ -0.58
PPFIA3-213ENST00000602905 TRAV21A0A0B4J279 112 aa11.45□□□□□ -0.58
PPFIA3-213ENST00000602905 IFNA1P01562 189 aa11.45□□□□□ -0.58
PPFIA3-213ENST00000602905 UBE2G1P62253 170 aa11.45□□□□□ -0.58
PPFIA3-213ENST00000602905 ANXA2RQ3ZCQ2 193 aa11.45□□□□□ -0.58
PPFIA3-213ENST00000602905 FAM159AQ6UWV7 190 aa11.45□□□□□ -0.58
PPFIA3-213ENST00000602905 C2CD4CQ8TF44 421 aa11.45□□□□□ -0.58
PPFIA3-213ENST00000602905 GNG13Q9P2W3 67 aa11.45□□□□□ -0.58
PPFIA3-213ENST00000602905 AKR1C3P42330 323 aa11.44□□□□□ -0.58
PPFIA3-213ENST00000602905 ATP5G3P48201 142 aa11.44□□□□□ -0.58
PPFIA3-213ENST00000602905 BLOC1S1P78537 153 aa11.44□□□□□ -0.58
PPFIA3-213ENST00000602905 SMUG1Q53HV7 270 aa11.44□□□□□ -0.58
PPFIA3-213ENST00000602905 ALKAL2Q6UX46 152 aa11.44□□□□□ -0.58
PPFIA3-213ENST00000602905 FMC1Q96HJ9 113 aa11.44□□□□□ -0.58
PPFIA3-213ENST00000602905 NOP10Q9NPE3 64 aaKnown RBP11.44□□□□□ -0.58
PPFIA3-213ENST00000602905 DEFB131BA0A096LNP1 70 aa11.43□□□□□ -0.58
PPFIA3-213ENST00000602905 TRAV34A0A0B4J273 112 aa11.43□□□□□ -0.58
PPFIA3-213ENST00000602905 TVP23CQ96ET8 276 aa11.43□□□□□ -0.58
PPFIA3-213ENST00000602905 NAGKQ9UJ70 344 aa11.43□□□□□ -0.58
PPFIA3-213ENST00000602905 TRGV11A0A075B6L2 103 aa11.42□□□□□ -0.58
PPFIA3-213ENST00000602905 PLAC8L1A1L4L8 177 aa11.42□□□□□ -0.58
PPFIA3-213ENST00000602905 IGLV2-11P01706 119 aa11.42□□□□□ -0.58
PPFIA3-213ENST00000602905 S100A9P06702 114 aaKnown RBP11.42□□□□□ -0.58
PPFIA3-213ENST00000602905 DEFB130BP0DP73 79 aa11.42□□□□□ -0.58
PPFIA3-213ENST00000602905 DEFB130AP0DP74 79 aa11.42□□□□□ -0.58
PPFIA3-213ENST00000602905 MUC21Q5SSG8 566 aa11.42□□□□□ -0.58
PPFIA3-213ENST00000602905 LINC00479Q96M42 142 aa11.42□□□□□ -0.58
PPFIA3-213ENST00000602905 C8orf49Q96NF6 230 aa11.42□□□□□ -0.58
PPFIA3-213ENST00000602905 TXNDC17Q9BRA2 123 aa11.42□□□□□ -0.58
PPFIA3-213ENST00000602905 BOLA1Q9Y3E2 137 aa11.42□□□□□ -0.58
PPFIA3-213ENST00000602905 GCGP01275 180 aa11.41□□□□□ -0.58
PPFIA3-213ENST00000602905 CCL20P78556 96 aa11.41□□□□□ -0.58
PPFIA3-213ENST00000602905 ZNF415Q09FC8 603 aa11.41□□□□□ -0.58
PPFIA3-213ENST00000602905 IBA57Q5T440 356 aaKnown RBP11.41□□□□□ -0.58
PPFIA3-213ENST00000602905 Q86TA4 180 aa11.41□□□□□ -0.58
PPFIA3-213ENST00000602905 KCNS1Q96KK3 526 aa11.41□□□□□ -0.58
PPFIA3-213ENST00000602905 ZFP30Q9Y2G7 519 aa11.41□□□□□ -0.58
PPFIA3-213ENST00000602905 TENM2Q9NT68 2774 aa11.4□□□□□ -0.58
PPFIA3-213ENST00000602905 IGLL5B9A064 214 aa11.4□□□□□ -0.58
PPFIA3-213ENST00000602905 HTN3P15516 51 aa11.4□□□□□ -0.58
PPFIA3-213ENST00000602905 TAGLN2P37802 199 aaKnown RBP11.4□□□□□ -0.58
PPFIA3-213ENST00000602905 TCTAP57738 103 aa11.4□□□□□ -0.58
PPFIA3-213ENST00000602905 DAZ2Q13117 558 aaKnown RBP11.4□□□□□ -0.58
PPFIA3-213ENST00000602905 TMEM183BQ1AE95 376 aa11.4□□□□□ -0.58
PPFIA3-213ENST00000602905 Q6ZQT7 251 aa11.4□□□□□ -0.58
PPFIA3-213ENST00000602905 SDF2L1Q9HCN8 221 aa11.4□□□□□ -0.58
PPFIA3-213ENST00000602905 GSN-AS1Q9NRJ2 163 aa11.4□□□□□ -0.58
PPFIA3-213ENST00000602905 CSMD3Q7Z407 3707 aa11.39□□□□□ -0.59
PPFIA3-213ENST00000602905 TRBV6-1A0A0K0K1D8 114 aa11.39□□□□□ -0.59
PPFIA3-213ENST00000602905 SCO2A0A1W2PP80 73 aa11.39□□□□□ -0.59
PPFIA3-213ENST00000602905 PFN1P07737 140 aaKnown RBP11.39□□□□□ -0.59
PPFIA3-213ENST00000602905 TCL1AP56279 114 aa11.39□□□□□ -0.59
PPFIA3-213ENST00000602905 TMEM183AQ8IXX5 376 aa11.39□□□□□ -0.59
PPFIA3-213ENST00000602905 C11orf72Q8NBR9 251 aa11.39□□□□□ -0.59
PPFIA3-213ENST00000602905 TP53TG3Q9ULZ0 132 aa11.39□□□□□ -0.59
PPFIA3-213ENST00000602905 KLF12Q9Y4X4 402 aa11.39□□□□□ -0.59
PPFIA3-213ENST00000602905 ATP5G1P05496 136 aa11.38□□□□□ -0.59
PPFIA3-213ENST00000602905 TDRG1Q3Y452 100 aa11.38□□□□□ -0.59
PPFIA3-213ENST00000602905 TRGV1A0A0A0MS02 117 aa11.37□□□□□ -0.59
PPFIA3-213ENST00000602905 GAGE12BA1L429 117 aa11.37□□□□□ -0.59
PPFIA3-213ENST00000602905 FABP5P3A8MUU1 101 aa11.37□□□□□ -0.59
PPFIA3-213ENST00000602905 PDE6DO43924 150 aa11.37□□□□□ -0.59
PPFIA3-213ENST00000602905 GAGE7O76087 117 aa11.37□□□□□ -0.59
PPFIA3-213ENST00000602905 GAGE12FP0CL80 117 aa11.37□□□□□ -0.59
PPFIA3-213ENST00000602905 GAGE12GP0CL81 117 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms