RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 IGKV2D-40P01614 121 aaPredicted RBP7.51□□□□□ -1.21
UPF1-213ENST00000601981 CD7P09564 240 aa7.51□□□□□ -1.21
UPF1-213ENST00000601981 FAM3BP58499 235 aaPredicted RBP7.51□□□□□ -1.21
UPF1-213ENST00000601981 SAPCD1Q5SSQ6 148 aa7.51□□□□□ -1.21
UPF1-213ENST00000601981 IGFL4Q6B9Z1 124 aa7.51□□□□□ -1.21
UPF1-213ENST00000601981 PRR27Q6MZM9 219 aa7.51□□□□□ -1.21
UPF1-213ENST00000601981 NUDT10Q8NFP7 164 aa7.51□□□□□ -1.21
UPF1-213ENST00000601981 OR4B1Q8NGF8 309 aa7.51□□□□□ -1.21
UPF1-213ENST00000601981 NUDT11Q96G61 164 aa7.51□□□□□ -1.21
UPF1-213ENST00000601981 C16orf92Q96LL3 132 aa7.51□□□□□ -1.21
UPF1-213ENST00000601981 SMIM27A0A1W2PRY6 76 aa7.5□□□□□ -1.21
UPF1-213ENST00000601981 ZNF705FA8MVS1 300 aaPredicted RBP7.5□□□□□ -1.21
UPF1-213ENST00000601981 NPIPB6E9PJ23 425 aa7.5□□□□□ -1.21
UPF1-213ENST00000601981 K7EQG2 157 aa7.5□□□□□ -1.21
UPF1-213ENST00000601981 P01737 135 aa7.5□□□□□ -1.21
UPF1-213ENST00000601981 RPL19P84098 196 aaKnown RBP7.5□□□□□ -1.21
UPF1-213ENST00000601981 RNF182Q8N6D2 247 aa7.5□□□□□ -1.21
UPF1-213ENST00000601981 DCANP1Q8TF63 244 aa7.5□□□□□ -1.21
UPF1-213ENST00000601981 DAZAP1Q96EP5 407 aaKnown RBP7.5□□□□□ -1.21
UPF1-213ENST00000601981 ZC2HC1AQ96GY0 325 aa7.5□□□□□ -1.21
UPF1-213ENST00000601981 NDFIP1Q9BT67 221 aa7.5□□□□□ -1.21
UPF1-213ENST00000601981 RPP21Q9H633 154 aaKnown RBP7.5□□□□□ -1.21
UPF1-213ENST00000601981 A8MZ25 164 aa7.49□□□□□ -1.21
UPF1-213ENST00000601981 PRAC2D3DTV9 90 aa7.49□□□□□ -1.21
UPF1-213ENST00000601981 ZNF688P0C7X2 276 aa7.49□□□□□ -1.21
UPF1-213ENST00000601981 CT45A10P0DMU9 189 aa7.49□□□□□ -1.21
UPF1-213ENST00000601981 IGHV4-30-4P0DP06 118 aa7.49□□□□□ -1.21
UPF1-213ENST00000601981 ODF3L2Q3SX64 289 aa7.49□□□□□ -1.21
UPF1-213ENST00000601981 LINC00322Q6ZN03 302 aaPredicted RBP7.49□□□□□ -1.21
UPF1-213ENST00000601981 C9orf47Q6ZRZ4 202 aa7.49□□□□□ -1.21
UPF1-213ENST00000601981 Q8N1Y9 231 aa7.49□□□□□ -1.21
UPF1-213ENST00000601981 TSKUQ8WUA8 353 aa7.49□□□□□ -1.21
UPF1-213ENST00000601981 VGLL1Q99990 258 aa7.49□□□□□ -1.21
UPF1-213ENST00000601981 MAP6D1Q9H9H5 199 aa7.49□□□□□ -1.21
UPF1-213ENST00000601981 PPP1R14DQ9NXH3 145 aa7.49□□□□□ -1.21
UPF1-213ENST00000601981 LOC105371267A0A1B0GV96 52 aa7.48□□□□□ -1.21
UPF1-213ENST00000601981 FAM231BA6NCW3 169 aa7.48□□□□□ -1.21
UPF1-213ENST00000601981 A8MWL6 223 aa7.48□□□□□ -1.21
UPF1-213ENST00000601981 DEFB131AP59861 70 aa7.48□□□□□ -1.21
UPF1-213ENST00000601981 COX19Q49B96 90 aa7.48□□□□□ -1.21
UPF1-213ENST00000601981 PSMG4Q5JS54 123 aa7.48□□□□□ -1.21
UPF1-213ENST00000601981 TMEM78Q5T7P6 136 aa7.48□□□□□ -1.21
UPF1-213ENST00000601981 DEFB125Q8N687 156 aa7.48□□□□□ -1.21
UPF1-213ENST00000601981 ZNF738Q8NE65 137 aa7.48□□□□□ -1.21
UPF1-213ENST00000601981 C20orf173Q96LM9 149 aa7.48□□□□□ -1.21
UPF1-213ENST00000601981 GFRA4Q9GZZ7 299 aa7.48□□□□□ -1.21
UPF1-213ENST00000601981 NAT8BQ9UHF3 227 aa7.48□□□□□ -1.21
UPF1-213ENST00000601981 LENEPQ9Y5L5 61 aa7.48□□□□□ -1.21
UPF1-213ENST00000601981 PHOX2AO14813 284 aa7.47□□□□□ -1.21
UPF1-213ENST00000601981 CA1P00915 261 aaPredicted RBP7.47□□□□□ -1.21
UPF1-213ENST00000601981 TRGC2P03986 189 aa7.47□□□□□ -1.21
UPF1-213ENST00000601981 ZNF138P52744 262 aa7.47□□□□□ -1.21
UPF1-213ENST00000601981 TCL1AP56279 114 aa7.47□□□□□ -1.21
UPF1-213ENST00000601981 SMUG1Q53HV7 270 aa7.47□□□□□ -1.21
UPF1-213ENST00000601981 ACTL10Q5JWF8 245 aa7.47□□□□□ -1.21
UPF1-213ENST00000601981 FAM162BQ5T6X4 162 aa7.47□□□□□ -1.21
UPF1-213ENST00000601981 STHQ8IWL8 128 aa7.47□□□□□ -1.21
UPF1-213ENST00000601981 ZFP82Q8N141 532 aa7.47□□□□□ -1.21
UPF1-213ENST00000601981 Q8TAT8 98 aa7.47□□□□□ -1.21
UPF1-213ENST00000601981 C8orf49Q96NF6 230 aa7.47□□□□□ -1.21
UPF1-213ENST00000601981 LOC102724200A0A096LPH7 203 aaPredicted RBP7.46□□□□□ -1.22
UPF1-213ENST00000601981 SH2D1AO60880 128 aa7.46□□□□□ -1.22
UPF1-213ENST00000601981 FRMD6-AS1P0C7T7 363 aa7.46□□□□□ -1.22
UPF1-213ENST00000601981 PRB4P10163 310 aaPredicted RBP7.46□□□□□ -1.22
UPF1-213ENST00000601981 CRIP1P50238 77 aa7.46□□□□□ -1.22
UPF1-213ENST00000601981 APOC4P55056 127 aa7.46□□□□□ -1.22
UPF1-213ENST00000601981 ERCC8Q13216 396 aa7.46□□□□□ -1.22
UPF1-213ENST00000601981 EBLN2Q6P2I7 272 aa7.46□□□□□ -1.22
UPF1-213ENST00000601981 WDR73Q6P4I2 378 aa7.46□□□□□ -1.22
UPF1-213ENST00000601981 RASL11AQ6T310 242 aa7.46□□□□□ -1.22
UPF1-213ENST00000601981 ATP5L2Q7Z4Y8 100 aa7.46□□□□□ -1.22
UPF1-213ENST00000601981 APRG1Q8IVJ8 170 aa7.46□□□□□ -1.22
UPF1-213ENST00000601981 OR2D3Q8NGH3 330 aa7.46□□□□□ -1.22
UPF1-213ENST00000601981 OR10J6PQ8NGY7 276 aa7.46□□□□□ -1.22
UPF1-213ENST00000601981 LINC00477Q96M19 166 aa7.46□□□□□ -1.22
UPF1-213ENST00000601981 NEU1Q99519 415 aa7.46□□□□□ -1.22
UPF1-213ENST00000601981 ASCL2Q99929 193 aa7.46□□□□□ -1.22
UPF1-213ENST00000601981 B9D2Q9BPU9 175 aa7.46□□□□□ -1.22
UPF1-213ENST00000601981 AGPAT4-IT1Q9H0P7 198 aa7.46□□□□□ -1.22
UPF1-213ENST00000601981 WFDC10AQ9H1F0 79 aa7.46□□□□□ -1.22
UPF1-213ENST00000601981 SAV1Q9H4B6 383 aaPredicted RBP7.46□□□□□ -1.22
UPF1-213ENST00000601981 C19orf73Q9NVV2 129 aa7.46□□□□□ -1.22
UPF1-213ENST00000601981 AGRNO00468 2067 aa7.46□□□□□ -1.22
UPF1-213ENST00000601981 TRBV7-9A0A0J9YWB2 115 aa7.45□□□□□ -1.22
UPF1-213ENST00000601981 HIGD1CA8MV81 97 aa7.45□□□□□ -1.22
UPF1-213ENST00000601981 MT-ND6P03923 174 aa7.45□□□□□ -1.22
UPF1-213ENST00000601981 NUTF2P61970 127 aaKnown RBP7.45□□□□□ -1.22
UPF1-213ENST00000601981 Q6AWC8 147 aa7.45□□□□□ -1.22
UPF1-213ENST00000601981 FOXI2Q6ZQN5 318 aa7.45□□□□□ -1.22
UPF1-213ENST00000601981 NUP35Q8NFH5 326 aa7.45□□□□□ -1.22
UPF1-213ENST00000601981 FRZBQ92765 325 aa7.45□□□□□ -1.22
UPF1-213ENST00000601981 GNB1LQ9BYB4 327 aa7.45□□□□□ -1.22
UPF1-213ENST00000601981 KIR2DL5BA0A0G2JN68 375 aa7.44□□□□□ -1.22
UPF1-213ENST00000601981 KIR2DL5BA0A0G2JPC4 375 aa7.44□□□□□ -1.22
UPF1-213ENST00000601981 XKRY2A2RUG3 117 aa7.44□□□□□ -1.22
UPF1-213ENST00000601981 HIST1H2BKO60814 126 aa7.44□□□□□ -1.22
UPF1-213ENST00000601981 S100A6P06703 90 aa7.44□□□□□ -1.22
UPF1-213ENST00000601981 HIST1H2BJP06899 126 aa7.44□□□□□ -1.22
UPF1-213ENST00000601981 TRGC1P0CF51 173 aa7.44□□□□□ -1.22
UPF1-213ENST00000601981 HIST1H2BOP23527 126 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms