RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 FAM19A4Q96LR4 140 aa6.54□□□□□ -1.36
VRK3-224ENST00000601849 C8orf49Q96NF6 230 aa6.54□□□□□ -1.36
VRK3-224ENST00000601849 SPXQ9BT56 116 aa6.54□□□□□ -1.36
VRK3-224ENST00000601849 KCNIP2Q9NS61 270 aa6.54□□□□□ -1.36
VRK3-224ENST00000601849 LYRM2Q9NU23 88 aaPredicted RBP6.54□□□□□ -1.36
VRK3-224ENST00000601849 MRPL16Q9NX20 251 aaKnown RBP6.54□□□□□ -1.36
VRK3-224ENST00000601849 ZNF492Q9P255 531 aa6.54□□□□□ -1.36
VRK3-224ENST00000601849 C9JCJ5 164 aa6.53□□□□□ -1.36
VRK3-224ENST00000601849 CCSO14618 274 aa6.53□□□□□ -1.36
VRK3-224ENST00000601849 PYYP10082 97 aa6.53□□□□□ -1.36
VRK3-224ENST00000601849 XGP55808 180 aa6.53□□□□□ -1.36
VRK3-224ENST00000601849 IFITM3Q01628 133 aa6.53□□□□□ -1.36
VRK3-224ENST00000601849 FHL2Q14192 279 aa6.53□□□□□ -1.36
VRK3-224ENST00000601849 OR51M1Q9H341 326 aa6.53□□□□□ -1.36
VRK3-224ENST00000601849 TP53TG3Q9ULZ0 132 aa6.53□□□□□ -1.36
VRK3-224ENST00000601849 C17orf112F2Z3M2 114 aa6.52□□□□□ -1.37
VRK3-224ENST00000601849 K7EQD1 137 aa6.52□□□□□ -1.37
VRK3-224ENST00000601849 LYRM1O43325 122 aa6.52□□□□□ -1.37
VRK3-224ENST00000601849 UPK1BO75841 260 aa6.52□□□□□ -1.37
VRK3-224ENST00000601849 NDUFB4O95168 129 aa6.52□□□□□ -1.37
VRK3-224ENST00000601849 CRYGDP07320 174 aa6.52□□□□□ -1.37
VRK3-224ENST00000601849 GYPEP15421 78 aa6.52□□□□□ -1.37
VRK3-224ENST00000601849 ASAH1Q13510 395 aa6.52□□□□□ -1.37
VRK3-224ENST00000601849 TMEM252Q8N6L7 170 aa6.52□□□□□ -1.37
VRK3-224ENST00000601849 SLC25A31Q9H0C2 315 aa6.52□□□□□ -1.37
VRK3-224ENST00000601849 TNFRSF18Q9Y5U5 241 aa6.52□□□□□ -1.37
VRK3-224ENST00000601849 TRGV11A0A075B6L2 103 aa6.51□□□□□ -1.37
VRK3-224ENST00000601849 TRAV6A0A075B6T7 132 aa6.51□□□□□ -1.37
VRK3-224ENST00000601849 IGKV2-40A0A087WW87 121 aaPredicted RBP6.51□□□□□ -1.37
VRK3-224ENST00000601849 RBAKDNA6NC62 111 aa6.51□□□□□ -1.37
VRK3-224ENST00000601849 IGKV2D-40P01614 121 aaPredicted RBP6.51□□□□□ -1.37
VRK3-224ENST00000601849 TCRBP04435 133 aa6.51□□□□□ -1.37
VRK3-224ENST00000601849 FAM74A1Q5RGS3 127 aa6.51□□□□□ -1.37
VRK3-224ENST00000601849 ZFAND2AQ8N6M9 145 aa6.51□□□□□ -1.37
VRK3-224ENST00000601849 OR4C5Q8NGB2 326 aa6.51□□□□□ -1.37
VRK3-224ENST00000601849 OR10G4Q8NGN3 311 aa6.51□□□□□ -1.37
VRK3-224ENST00000601849 RASL10AQ92737 203 aa6.51□□□□□ -1.37
VRK3-224ENST00000601849 PAXXQ9BUH6 204 aa6.51□□□□□ -1.37
VRK3-224ENST00000601849 NPCDR1Q9BY65 106 aa6.51□□□□□ -1.37
VRK3-224ENST00000601849 LENEPQ9Y5L5 61 aa6.51□□□□□ -1.37
VRK3-224ENST00000601849 VPS13BQ7Z7G8 4022 aa6.5□□□□□ -1.37
VRK3-224ENST00000601849 IGLV5-52A0A0A0MRZ9 124 aa6.5□□□□□ -1.37
VRK3-224ENST00000601849 TRAV8-6A0A0B4J262 113 aa6.5□□□□□ -1.37
VRK3-224ENST00000601849 OR7C2O60412 319 aa6.5□□□□□ -1.37
VRK3-224ENST00000601849 DNAH10OSP0CZ25 163 aa6.5□□□□□ -1.37
VRK3-224ENST00000601849 FUSP35637 526 aaKnown RBP eCLIP6.5□□□□□ -1.37
VRK3-224ENST00000601849 PPT1P50897 306 aa6.5□□□□□ -1.37
VRK3-224ENST00000601849 RANP62826 216 aaKnown RBP6.5□□□□□ -1.37
VRK3-224ENST00000601849 RAB32Q13637 225 aa6.5□□□□□ -1.37
VRK3-224ENST00000601849 ZNF266Q14584 549 aa6.5□□□□□ -1.37
VRK3-224ENST00000601849 MUC21Q5SSG8 566 aa6.5□□□□□ -1.37
VRK3-224ENST00000601849 NHLRC2Q8NBF2 726 aa6.5□□□□□ -1.37
VRK3-224ENST00000601849 NTN5Q8WTR8 489 aaPredicted RBP6.5□□□□□ -1.37
VRK3-224ENST00000601849 ATP5SQ99766 215 aa6.5□□□□□ -1.37
VRK3-224ENST00000601849 SLC25A2Q9BXI2 301 aa6.5□□□□□ -1.37
VRK3-224ENST00000601849 SH3BGRL3Q9H299 93 aa6.5□□□□□ -1.37
VRK3-224ENST00000601849 TRAV4A0A0B4J268 109 aa6.49□□□□□ -1.37
VRK3-224ENST00000601849 IGHV3-38A0A0C4DH36 116 aa6.49□□□□□ -1.37
VRK3-224ENST00000601849 IGSF23A1L1A6 192 aa6.49□□□□□ -1.37
VRK3-224ENST00000601849 CIDEAO60543 219 aa6.49□□□□□ -1.37
VRK3-224ENST00000601849 SMR3BP02814 79 aaPredicted RBP6.49□□□□□ -1.37
VRK3-224ENST00000601849 PFN1P07737 140 aaKnown RBP6.49□□□□□ -1.37
VRK3-224ENST00000601849 H2AFB2P0C5Z0 115 aa6.49□□□□□ -1.37
VRK3-224ENST00000601849 OR10J4P0C629 311 aa6.49□□□□□ -1.37
VRK3-224ENST00000601849 SFTA3P0C7M3 94 aa6.49□□□□□ -1.37
VRK3-224ENST00000601849 TAS2R45P59539 299 aa6.49□□□□□ -1.37
VRK3-224ENST00000601849 KRTAP10-1P60331 282 aa6.49□□□□□ -1.37
VRK3-224ENST00000601849 TMEM183BQ1AE95 376 aa6.49□□□□□ -1.37
VRK3-224ENST00000601849 MZT2BQ6NZ67 158 aa6.49□□□□□ -1.37
VRK3-224ENST00000601849 Q6ZSN1 163 aa6.49□□□□□ -1.37
VRK3-224ENST00000601849 MIR17HGQ75NE6 70 aa6.49□□□□□ -1.37
VRK3-224ENST00000601849 WFDC10BQ8IUB3 73 aa6.49□□□□□ -1.37
VRK3-224ENST00000601849 TMEM183AQ8IXX5 376 aa6.49□□□□□ -1.37
VRK3-224ENST00000601849 OR5C1Q8NGR4 320 aa6.49□□□□□ -1.37
VRK3-224ENST00000601849 CMTM2Q8TAZ6 248 aa6.49□□□□□ -1.37
VRK3-224ENST00000601849 ZNF479Q96JC4 524 aa6.49□□□□□ -1.37
VRK3-224ENST00000601849 TMEM70Q9BUB7 260 aa6.49□□□□□ -1.37
VRK3-224ENST00000601849 NUDT15Q9NV35 164 aa6.49□□□□□ -1.37
VRK3-224ENST00000601849 MDFICQ9P1T7 246 aa6.49□□□□□ -1.37
VRK3-224ENST00000601849 MYCBP2O75592 4640 aa6.48□□□□□ -1.37
VRK3-224ENST00000601849 FAM240BA0A1B0GVZ2 78 aa6.48□□□□□ -1.37
VRK3-224ENST00000601849 J3QL48 77 aa6.48□□□□□ -1.37
VRK3-224ENST00000601849 M0R2P5 195 aa6.48□□□□□ -1.37
VRK3-224ENST00000601849 NHLH2Q02577 135 aa6.48□□□□□ -1.37
VRK3-224ENST00000601849 GCSAMLQ5JQS6 135 aa6.48□□□□□ -1.37
VRK3-224ENST00000601849 Q6AWC8 147 aa6.48□□□□□ -1.37
VRK3-224ENST00000601849 Q8TAT8 98 aa6.48□□□□□ -1.37
VRK3-224ENST00000601849 THAP6Q8TBB0 222 aa6.48□□□□□ -1.37
VRK3-224ENST00000601849 KCNS1Q96KK3 526 aa6.48□□□□□ -1.37
VRK3-224ENST00000601849 SEC22CQ9BRL7 303 aa6.48□□□□□ -1.37
VRK3-224ENST00000601849 C11orf1Q9H5F2 150 aa6.48□□□□□ -1.37
VRK3-224ENST00000601849 NAGKQ9UJ70 344 aa6.48□□□□□ -1.37
VRK3-224ENST00000601849 DMBT1Q9UGM3 2413 aaPredicted RBP6.47□□□□□ -1.37
VRK3-224ENST00000601849 TRAV21A0A0B4J279 112 aa6.47□□□□□ -1.37
VRK3-224ENST00000601849 TIRAPP58753 221 aa6.47□□□□□ -1.37
VRK3-224ENST00000601849 UBE2L3P68036 154 aaKnown RBP6.47□□□□□ -1.37
VRK3-224ENST00000601849 CYCSP99999 105 aaKnown RBP6.47□□□□□ -1.37
VRK3-224ENST00000601849 TDRG1Q3Y452 100 aa6.47□□□□□ -1.37
VRK3-224ENST00000601849 KHDC3LQ587J8 217 aa6.47□□□□□ -1.37
VRK3-224ENST00000601849 OR10J3Q5JRS4 329 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms