RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 FAM19A4Q96LR4 140 aa10.61□□□□□ -0.71
USE1-210ENST00000601662 SPATA25Q9BR10 227 aa10.61□□□□□ -0.71
USE1-210ENST00000601662 LOC102724200A0A096LPH7 203 aaPredicted RBP10.6□□□□□ -0.71
USE1-210ENST00000601662 F8W036 122 aa10.6□□□□□ -0.71
USE1-210ENST00000601662 GPX1P07203 203 aa10.6□□□□□ -0.71
USE1-210ENST00000601662 CDKN1BP46527 198 aa10.6□□□□□ -0.71
USE1-210ENST00000601662 SMUG1Q53HV7 270 aa10.6□□□□□ -0.71
USE1-210ENST00000601662 AMTNQ6UX39 209 aa10.6□□□□□ -0.71
USE1-210ENST00000601662 COX8CQ7Z4L0 72 aa10.6□□□□□ -0.71
USE1-210ENST00000601662 Q8TAT8 98 aa10.6□□□□□ -0.71
USE1-210ENST00000601662 IGF2BP2-AS1Q96M15 143 aa10.6□□□□□ -0.71
USE1-210ENST00000601662 NIPSNAP3BQ9BS92 247 aa10.6□□□□□ -0.71
USE1-210ENST00000601662 C1QTNF4Q9BXJ3 329 aa10.6□□□□□ -0.71
USE1-210ENST00000601662 SEC11CQ9BY50 192 aa10.6□□□□□ -0.71
USE1-210ENST00000601662 NAT8Q9UHE5 227 aa10.6□□□□□ -0.71
USE1-210ENST00000601662 KIR2DL5BA0A0G2JN68 375 aa10.59□□□□□ -0.71
USE1-210ENST00000601662 KIR2DL5BA0A0G2JPC4 375 aa10.59□□□□□ -0.71
USE1-210ENST00000601662 KRBOX1C9JBD0 128 aa10.59□□□□□ -0.71
USE1-210ENST00000601662 RPL35AP18077 110 aaKnown RBP10.59□□□□□ -0.71
USE1-210ENST00000601662 APOC4P55056 127 aa10.59□□□□□ -0.71
USE1-210ENST00000601662 KIR2DL5AQ8N109 375 aa10.59□□□□□ -0.71
USE1-210ENST00000601662 KIR2DL5BQ8NHK3 375 aa10.59□□□□□ -0.71
USE1-210ENST00000601662 TVP23CQ96ET8 276 aa10.59□□□□□ -0.71
USE1-210ENST00000601662 MLST8Q9BVC4 326 aa10.59□□□□□ -0.71
USE1-210ENST00000601662 CSTL1Q9H114 145 aa10.59□□□□□ -0.71
USE1-210ENST00000601662 KLLNB2CW77 178 aa10.58□□□□□ -0.72
USE1-210ENST00000601662 ZFAND2AQ8N6M9 145 aa10.58□□□□□ -0.72
USE1-210ENST00000601662 OCC1Q8TAD7 63 aa10.58□□□□□ -0.72
USE1-210ENST00000601662 TRBV20OR9-2A0A075B6H5 130 aa10.57□□□□□ -0.72
USE1-210ENST00000601662 FABP5P3A8MUU1 101 aa10.57□□□□□ -0.72
USE1-210ENST00000601662 UBE2CO00762 179 aa10.57□□□□□ -0.72
USE1-210ENST00000601662 PNRC1Q12796 327 aaPredicted RBP10.57□□□□□ -0.72
USE1-210ENST00000601662 SPINK13Q1W4C9 94 aa10.57□□□□□ -0.72
USE1-210ENST00000601662 C8orf49Q96NF6 230 aa10.57□□□□□ -0.72
USE1-210ENST00000601662 C20orf144Q9BQM9 153 aa10.57□□□□□ -0.72
USE1-210ENST00000601662 SDF2L1Q9HCN8 221 aa10.57□□□□□ -0.72
USE1-210ENST00000601662 AGRNO00468 2067 aa10.56□□□□□ -0.72
USE1-210ENST00000601662 C7orf71A4D174 169 aa10.56□□□□□ -0.72
USE1-210ENST00000601662 M0R2Z0 102 aa10.56□□□□□ -0.72
USE1-210ENST00000601662 GCGP01275 180 aa10.56□□□□□ -0.72
USE1-210ENST00000601662 IGLV2-8P01709 118 aa10.56□□□□□ -0.72
USE1-210ENST00000601662 MGST1P10620 155 aaKnown RBP10.56□□□□□ -0.72
USE1-210ENST00000601662 RNASE4P34096 147 aaKnown RBP10.56□□□□□ -0.72
USE1-210ENST00000601662 C10orf91Q5T1B1 145 aa10.56□□□□□ -0.72
USE1-210ENST00000601662 DAZAP1Q96EP5 407 aaKnown RBP10.56□□□□□ -0.72
USE1-210ENST00000601662 TRAV21A0A0B4J279 112 aa10.55□□□□□ -0.72
USE1-210ENST00000601662 FXYD7P58549 80 aa10.55□□□□□ -0.72
USE1-210ENST00000601662 FAM162BQ5T6X4 162 aa10.55□□□□□ -0.72
USE1-210ENST00000601662 Q6AWC8 147 aa10.55□□□□□ -0.72
USE1-210ENST00000601662 LINC01551Q86U37 167 aa10.55□□□□□ -0.72
USE1-210ENST00000601662 NHLRC2Q8NBF2 726 aa10.55□□□□□ -0.72
USE1-210ENST00000601662 ZC2HC1AQ96GY0 325 aa10.55□□□□□ -0.72
USE1-210ENST00000601662 CARHSP1Q9Y2V2 147 aaKnown RBP10.55□□□□□ -0.72
USE1-210ENST00000601662 PGPEP1LA6NFU8 196 aa10.54□□□□□ -0.72
USE1-210ENST00000601662 J3KRW8 73 aa10.54□□□□□ -0.72
USE1-210ENST00000601662 CA1P00915 261 aaPredicted RBP10.54□□□□□ -0.72
USE1-210ENST00000601662 INSP01308 110 aa10.54□□□□□ -0.72
USE1-210ENST00000601662 PFN1P07737 140 aaKnown RBP10.54□□□□□ -0.72
USE1-210ENST00000601662 RPL23P62829 140 aaKnown RBP10.54□□□□□ -0.72
USE1-210ENST00000601662 TMEM256Q8N2U0 113 aa10.54□□□□□ -0.72
USE1-210ENST00000601662 XCL2Q9UBD3 114 aa10.54□□□□□ -0.72
USE1-210ENST00000601662 TRAV12-2A0A075B6T6 113 aa10.53□□□□□ -0.72
USE1-210ENST00000601662 CRXO43186 299 aaPredicted RBP10.53□□□□□ -0.72
USE1-210ENST00000601662 ADCYAP1P18509 176 aa10.53□□□□□ -0.72
USE1-210ENST00000601662 ADIRFQ15847 76 aa10.53□□□□□ -0.72
USE1-210ENST00000601662 GFI1BQ5VTD9 330 aa10.53□□□□□ -0.72
USE1-210ENST00000601662 GOLT1BQ9Y3E0 138 aa10.53□□□□□ -0.72
USE1-210ENST00000601662 TRAV12-3A0A0B4J271 114 aa10.52□□□□□ -0.73
USE1-210ENST00000601662 B4DEV8 164 aa10.52□□□□□ -0.73
USE1-210ENST00000601662 K7EN84 100 aa10.52□□□□□ -0.73
USE1-210ENST00000601662 ZNF324O75467 553 aaPredicted RBP10.52□□□□□ -0.73
USE1-210ENST00000601662 GIG44P09565 113 aaPredicted RBP10.52□□□□□ -0.73
USE1-210ENST00000601662 CRIP1P50238 77 aa10.52□□□□□ -0.73
USE1-210ENST00000601662 ZNF80P51504 273 aaPredicted RBP10.52□□□□□ -0.73
USE1-210ENST00000601662 BTN1A1Q13410 526 aa10.52□□□□□ -0.73
USE1-210ENST00000601662 DEFB135Q30KP9 77 aa10.52□□□□□ -0.73
USE1-210ENST00000601662 PRR27Q6MZM9 219 aa10.52□□□□□ -0.73
USE1-210ENST00000601662 FAM231DQ6ZW35 169 aa10.52□□□□□ -0.73
USE1-210ENST00000601662 C15orf54Q8N8G6 183 aa10.52□□□□□ -0.73
USE1-210ENST00000601662 OVOL2Q9BRP0 275 aa10.52□□□□□ -0.73
USE1-210ENST00000601662 H7BYZ3 331 aa10.51□□□□□ -0.73
USE1-210ENST00000601662 SH2D1AO60880 128 aa10.51□□□□□ -0.73
USE1-210ENST00000601662 P01737 135 aa10.51□□□□□ -0.73
USE1-210ENST00000601662 ERVFC1-1P60608 527 aa10.51□□□□□ -0.73
USE1-210ENST00000601662 OR5I1Q13606 314 aa10.51□□□□□ -0.73
USE1-210ENST00000601662 KIR3DS1Q14943 382 aa10.51□□□□□ -0.73
USE1-210ENST00000601662 PRR9Q5T870 116 aa10.51□□□□□ -0.73
USE1-210ENST00000601662 Q6ZWC4 215 aa10.51□□□□□ -0.73
USE1-210ENST00000601662 SVBPQ8N300 66 aa10.51□□□□□ -0.73
USE1-210ENST00000601662 MUC7Q8TAX7 377 aa10.51□□□□□ -0.73
USE1-210ENST00000601662 ISOC2Q96AB3 205 aa10.51□□□□□ -0.73
USE1-210ENST00000601662 KCNS1Q96KK3 526 aa10.51□□□□□ -0.73
USE1-210ENST00000601662 LINC01587Q99440 93 aa10.51□□□□□ -0.73
USE1-210ENST00000601662 PYGO2Q9BRQ0 406 aa10.51□□□□□ -0.73
USE1-210ENST00000601662 TMEM208Q9BTX3 173 aa10.51□□□□□ -0.73
USE1-210ENST00000601662 EDA2RQ9HAV5 297 aa10.51□□□□□ -0.73
USE1-210ENST00000601662 OSTCQ9NRP0 149 aa10.51□□□□□ -0.73
USE1-210ENST00000601662 C19orf71A6NCJ1 209 aa10.5□□□□□ -0.73
USE1-210ENST00000601662 M0R036 132 aa10.5□□□□□ -0.73
USE1-210ENST00000601662 SPRY2O43597 315 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms