RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 TMED6Q8WW62 240 aa11.78□□□□□ -0.52
NOTCH3-205ENST00000600841 ARPC5LQ9BPX5 153 aa11.78□□□□□ -0.52
NOTCH3-205ENST00000600841 SH3BGRL3Q9H299 93 aa11.78□□□□□ -0.52
NOTCH3-205ENST00000600841 TNFSF18Q9UNG2 199 aa11.78□□□□□ -0.52
NOTCH3-205ENST00000600841 TRGV2A0A075B6R0 118 aa11.77□□□□□ -0.53
NOTCH3-205ENST00000600841 TRAV26-1A0A087WT03 109 aa11.77□□□□□ -0.53
NOTCH3-205ENST00000600841 TRGV1A0A0A0MS02 117 aa11.77□□□□□ -0.53
NOTCH3-205ENST00000600841 BORCS7-ASMTA0A0B4J1R7 106 aa11.77□□□□□ -0.53
NOTCH3-205ENST00000600841 RNF222A6NCQ9 220 aa11.77□□□□□ -0.53
NOTCH3-205ENST00000600841 SMLR1H3BR10 107 aa11.77□□□□□ -0.53
NOTCH3-205ENST00000600841 STAG3L2P0CL84 134 aa11.77□□□□□ -0.53
NOTCH3-205ENST00000600841 STAG3L3P0CL85 134 aa11.77□□□□□ -0.53
NOTCH3-205ENST00000600841 TCL1AP56279 114 aa11.77□□□□□ -0.53
NOTCH3-205ENST00000600841 IBA57Q5T440 356 aaKnown RBP11.77□□□□□ -0.53
NOTCH3-205ENST00000600841 Q6ZQT7 251 aa11.77□□□□□ -0.53
NOTCH3-205ENST00000600841 GOLT1AQ6ZVE7 132 aa11.77□□□□□ -0.53
NOTCH3-205ENST00000600841 RAB24Q969Q5 203 aa11.77□□□□□ -0.53
NOTCH3-205ENST00000600841 GNPNAT1Q96EK6 184 aaPredicted RBP11.77□□□□□ -0.53
NOTCH3-205ENST00000600841 TMPRSS5Q9H3S3 457 aa11.77□□□□□ -0.53
NOTCH3-205ENST00000600841 TP53TG3Q9ULZ0 132 aa11.77□□□□□ -0.53
NOTCH3-205ENST00000600841 KLF12Q9Y4X4 402 aa11.77□□□□□ -0.53
NOTCH3-205ENST00000600841 HOXA5P20719 270 aa11.76□□□□□ -0.53
NOTCH3-205ENST00000600841 CCL18P55774 89 aa11.76□□□□□ -0.53
NOTCH3-205ENST00000600841 RPL7L1Q6DKI1 246 aaKnown RBP11.76□□□□□ -0.53
NOTCH3-205ENST00000600841 LINC00336Q6ZUF6 198 aa11.76□□□□□ -0.53
NOTCH3-205ENST00000600841 ACTR3CQ9C0K3 210 aaPredicted RBP11.76□□□□□ -0.53
NOTCH3-205ENST00000600841 MUC4Q99102 2169 aa11.76□□□□□ -0.53
NOTCH3-205ENST00000600841 DNAH17Q9UFH2 4485 aa11.76□□□□□ -0.53
NOTCH3-205ENST00000600841 SPINK4O60575 86 aa11.75□□□□□ -0.53
NOTCH3-205ENST00000600841 GCHFRP30047 84 aa11.75□□□□□ -0.53
NOTCH3-205ENST00000600841 ZNF415Q09FC8 603 aa11.75□□□□□ -0.53
NOTCH3-205ENST00000600841 MUC21Q5SSG8 566 aa11.75□□□□□ -0.53
NOTCH3-205ENST00000600841 Q6AWC8 147 aa11.75□□□□□ -0.53
NOTCH3-205ENST00000600841 ST6GAL2Q96JF0 529 aa11.75□□□□□ -0.53
NOTCH3-205ENST00000600841 C18orf15Q96N68 181 aa11.75□□□□□ -0.53
NOTCH3-205ENST00000600841 FAT2Q9NYQ8 4349 aa11.74□□□□□ -0.53
NOTCH3-205ENST00000600841 A0A0J9YY99 117 aa11.74□□□□□ -0.53
NOTCH3-205ENST00000600841 ARPC5O15511 151 aa11.74□□□□□ -0.53
NOTCH3-205ENST00000600841 GNG5P63218 68 aa11.74□□□□□ -0.53
NOTCH3-205ENST00000600841 Q6ZNX1 250 aa11.74□□□□□ -0.53
NOTCH3-205ENST00000600841 Q6ZR54 194 aa11.74□□□□□ -0.53
NOTCH3-205ENST00000600841 SUN5Q8TC36 379 aa11.74□□□□□ -0.53
NOTCH3-205ENST00000600841 G3V3Q6 166 aa11.73□□□□□ -0.53
NOTCH3-205ENST00000600841 H3BNG1 76 aa11.73□□□□□ -0.53
NOTCH3-205ENST00000600841 CXorf1O96002 111 aa11.73□□□□□ -0.53
NOTCH3-205ENST00000600841 FAM159AQ6UWV7 190 aa11.73□□□□□ -0.53
NOTCH3-205ENST00000600841 C5orf17Q8NAS9 161 aa11.73□□□□□ -0.53
NOTCH3-205ENST00000600841 TMEM167BQ9NRX6 74 aa11.73□□□□□ -0.53
NOTCH3-205ENST00000600841 MRPL16Q9NX20 251 aaKnown RBP11.73□□□□□ -0.53
NOTCH3-205ENST00000600841 hCG_2014768A0A024R1R8 64 aa11.72□□□□□ -0.53
NOTCH3-205ENST00000600841 TRAV8-1A0A0A6YYK1 113 aa11.72□□□□□ -0.53
NOTCH3-205ENST00000600841 SERTM2A0A1B0GWG4 89 aa11.72□□□□□ -0.53
NOTCH3-205ENST00000600841 RTL8CO15255 209 aa11.72□□□□□ -0.53
NOTCH3-205ENST00000600841 TREM1Q9NP99 234 aa11.72□□□□□ -0.53
NOTCH3-205ENST00000600841 NAGKQ9UJ70 344 aa11.72□□□□□ -0.53
NOTCH3-205ENST00000600841 LINC00588Q9Y4M8 146 aa11.72□□□□□ -0.53
NOTCH3-205ENST00000600841 TRGV11A0A075B6L2 103 aa11.71□□□□□ -0.53
NOTCH3-205ENST00000600841 K7EQM0 130 aa11.71□□□□□ -0.53
NOTCH3-205ENST00000600841 TAAR5O14804 337 aa11.71□□□□□ -0.53
NOTCH3-205ENST00000600841 TMEM183BQ1AE95 376 aa11.71□□□□□ -0.53
NOTCH3-205ENST00000600841 SOHLH1Q5JUK2 328 aa11.71□□□□□ -0.53
NOTCH3-205ENST00000600841 SSX7Q7RTT5 188 aa11.71□□□□□ -0.53
NOTCH3-205ENST00000600841 IQCF2Q8IXL9 164 aa11.71□□□□□ -0.53
NOTCH3-205ENST00000600841 TMEM183AQ8IXX5 376 aa11.71□□□□□ -0.53
NOTCH3-205ENST00000600841 ZNRF2Q8NHG8 242 aa11.71□□□□□ -0.53
NOTCH3-205ENST00000600841 TRAV21A0A0B4J279 112 aa11.7□□□□□ -0.54
NOTCH3-205ENST00000600841 F6UZH7 168 aa11.7□□□□□ -0.54
NOTCH3-205ENST00000600841 TCRAP04437 139 aa11.7□□□□□ -0.54
NOTCH3-205ENST00000600841 TVP23CQ96ET8 276 aa11.7□□□□□ -0.54
NOTCH3-205ENST00000600841 NDFIP1Q9BT67 221 aa11.7□□□□□ -0.54
NOTCH3-205ENST00000600841 MDFICQ9P1T7 246 aa11.7□□□□□ -0.54
NOTCH3-205ENST00000600841 CTXND1A0A1B0GTU2 59 aa11.69□□□□□ -0.54
NOTCH3-205ENST00000600841 PRSS29PA6NIE9 313 aa11.69□□□□□ -0.54
NOTCH3-205ENST00000600841 GGTLC3B5MD39 225 aa11.69□□□□□ -0.54
NOTCH3-205ENST00000600841 IGHV3-53P01767 116 aa11.69□□□□□ -0.54
NOTCH3-205ENST00000600841 SUMO1P63165 101 aaKnown RBP11.69□□□□□ -0.54
NOTCH3-205ENST00000600841 TDRG1Q3Y452 100 aa11.69□□□□□ -0.54
NOTCH3-205ENST00000600841 AKR1C8PQ5T2L2 129 aa11.69□□□□□ -0.54
NOTCH3-205ENST00000600841 C1orf134Q5TEV5 83 aa11.69□□□□□ -0.54
NOTCH3-205ENST00000600841 VSIG2Q96IQ7 327 aa11.69□□□□□ -0.54
NOTCH3-205ENST00000600841 SGK494Q96LW2 274 aa11.69□□□□□ -0.54
NOTCH3-205ENST00000600841 SPXQ9BT56 116 aa11.69□□□□□ -0.54
NOTCH3-205ENST00000600841 NBDYA0A0U1RRE5 68 aa11.68□□□□□ -0.54
NOTCH3-205ENST00000600841 ZNF726P1Q15940 193 aa11.68□□□□□ -0.54
NOTCH3-205ENST00000600841 OR11H4Q8NGC9 324 aa11.68□□□□□ -0.54
NOTCH3-205ENST00000600841 EPDR1Q9UM22 224 aa11.68□□□□□ -0.54
NOTCH3-205ENST00000600841 PKHD1P08F94 4074 aa11.67□□□□□ -0.54
NOTCH3-205ENST00000600841 A0A1W2PRE2 83 aa11.67□□□□□ -0.54
NOTCH3-205ENST00000600841 HMSDA8MTL9 139 aa11.67□□□□□ -0.54
NOTCH3-205ENST00000600841 PAX4O43316 350 aa11.67□□□□□ -0.54
NOTCH3-205ENST00000600841 SLAQ13239 276 aa11.67□□□□□ -0.54
NOTCH3-205ENST00000600841 CYB561D1Q8N8Q1 229 aa11.67□□□□□ -0.54
NOTCH3-205ENST00000600841 CYTL1Q9NRR1 136 aa11.67□□□□□ -0.54
NOTCH3-205ENST00000600841 PSG8Q9UQ74 426 aa11.67□□□□□ -0.54
NOTCH3-205ENST00000600841 A0A096LPF7 62 aa11.66□□□□□ -0.54
NOTCH3-205ENST00000600841 GNRH2O43555 120 aa11.66□□□□□ -0.54
NOTCH3-205ENST00000600841 ESRGQ1W209 222 aa11.66□□□□□ -0.54
NOTCH3-205ENST00000600841 KCNRGQ8N5I3 272 aa11.66□□□□□ -0.54
NOTCH3-205ENST00000600841 RASL10AQ92737 203 aa11.66□□□□□ -0.54
NOTCH3-205ENST00000600841 KCNS1Q96KK3 526 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms