RNA–Protein interactions for RNA: ENST00000600840.1

TRIM28-214, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-214ENST00000600840 DNLZQ5SXM8 178 aa6.39□□□□□ -1.39
TRIM28-214ENST00000600840 AMTNQ6UX39 209 aa6.39□□□□□ -1.39
TRIM28-214ENST00000600840 TRPT1Q86TN4 253 aaKnown RBP6.39□□□□□ -1.39
TRIM28-214ENST00000600840 ARL6IP6Q8N6S5 226 aa6.39□□□□□ -1.39
TRIM28-214ENST00000600840 C11orf52Q96A22 123 aa6.39□□□□□ -1.39
TRIM28-214ENST00000600840 PYGO2Q9BRQ0 406 aa6.39□□□□□ -1.39
TRIM28-214ENST00000600840 Q9H3A6 140 aa6.39□□□□□ -1.39
TRIM28-214ENST00000600840 CLEC5AQ9NY25 188 aa6.39□□□□□ -1.39
TRIM28-214ENST00000600840 KIAA1109Q2LD37 5005 aa6.38□□□□□ -1.39
TRIM28-214ENST00000600840 PGPA6NDG6 321 aa6.38□□□□□ -1.39
TRIM28-214ENST00000600840 KNCNA6PVL3 124 aa6.38□□□□□ -1.39
TRIM28-214ENST00000600840 C9JCJ5 164 aa6.38□□□□□ -1.39
TRIM28-214ENST00000600840 TYMSP04818 313 aa6.38□□□□□ -1.39
TRIM28-214ENST00000600840 ID1P41134 155 aa6.38□□□□□ -1.39
TRIM28-214ENST00000600840 SNRPEP62304 92 aaKnown RBP6.38□□□□□ -1.39
TRIM28-214ENST00000600840 SNRPD3P62318 126 aaKnown RBP6.38□□□□□ -1.39
TRIM28-214ENST00000600840 RPL23P62829 140 aaKnown RBP6.38□□□□□ -1.39
TRIM28-214ENST00000600840 COX19Q49B96 90 aa6.38□□□□□ -1.39
TRIM28-214ENST00000600840 IQCF2Q8IXL9 164 aa6.38□□□□□ -1.39
TRIM28-214ENST00000600840 C2CD4CQ8TF44 421 aa6.38□□□□□ -1.39
TRIM28-214ENST00000600840 FAM19A4Q96LR4 140 aa6.38□□□□□ -1.39
TRIM28-214ENST00000600840 OTORQ9NRC9 128 aa6.38□□□□□ -1.39
TRIM28-214ENST00000600840 A0A0J9YWU9 116 aa6.37□□□□□ -1.39
TRIM28-214ENST00000600840 NPIPB6E9PJ23 425 aa6.37□□□□□ -1.39
TRIM28-214ENST00000600840 IGLV2-11P01706 119 aa6.37□□□□□ -1.39
TRIM28-214ENST00000600840 PFN1P07737 140 aaKnown RBP6.37□□□□□ -1.39
TRIM28-214ENST00000600840 ZNF705DP0CH99 300 aaPredicted RBP6.37□□□□□ -1.39
TRIM28-214ENST00000600840 ZNF705BP0CI00 300 aaPredicted RBP6.37□□□□□ -1.39
TRIM28-214ENST00000600840 PRB4P10163 310 aaPredicted RBP6.37□□□□□ -1.39
TRIM28-214ENST00000600840 HLA-DRB4P13762 266 aa6.37□□□□□ -1.39
TRIM28-214ENST00000600840 HOXA5P20719 270 aa6.37□□□□□ -1.39
TRIM28-214ENST00000600840 S100A2P29034 98 aa6.37□□□□□ -1.39
TRIM28-214ENST00000600840 RPL35P42766 123 aaKnown RBP6.37□□□□□ -1.39
TRIM28-214ENST00000600840 SUMO1P63165 101 aaKnown RBP6.37□□□□□ -1.39
TRIM28-214ENST00000600840 FABP9Q0Z7S8 132 aa6.37□□□□□ -1.39
TRIM28-214ENST00000600840 DEFB135Q30KP9 77 aa6.37□□□□□ -1.39
TRIM28-214ENST00000600840 CST9LP1Q5W188 147 aa6.37□□□□□ -1.39
TRIM28-214ENST00000600840 FOXI2Q6ZQN5 318 aa6.37□□□□□ -1.39
TRIM28-214ENST00000600840 ZFP82Q8N141 532 aa6.37□□□□□ -1.39
TRIM28-214ENST00000600840 OR8A1Q8NGG7 326 aa6.37□□□□□ -1.39
TRIM28-214ENST00000600840 IL17DQ8TAD2 202 aa6.37□□□□□ -1.39
TRIM28-214ENST00000600840 C12orf57Q99622 126 aa6.37□□□□□ -1.39
TRIM28-214ENST00000600840 AGPAT4-IT1Q9H0P7 198 aa6.37□□□□□ -1.39
TRIM28-214ENST00000600840 PPP1R14DQ9NXH3 145 aa6.37□□□□□ -1.39
TRIM28-214ENST00000600840 HLA-DRB4X5D2U9 266 aa6.37□□□□□ -1.39
TRIM28-214ENST00000600840 RBAKDNA6NC62 111 aa6.36□□□□□ -1.39
TRIM28-214ENST00000600840 DIRC3C9JPN6 131 aa6.36□□□□□ -1.39
TRIM28-214ENST00000600840 RPL35AP18077 110 aaKnown RBP6.36□□□□□ -1.39
TRIM28-214ENST00000600840 ATP5G3P48201 142 aa6.36□□□□□ -1.39
TRIM28-214ENST00000600840 C9orf47Q6ZRZ4 202 aa6.36□□□□□ -1.39
TRIM28-214ENST00000600840 SMIM12Q96EX1 92 aa6.36□□□□□ -1.39
TRIM28-214ENST00000600840 VGLL1Q99990 258 aa6.36□□□□□ -1.39
TRIM28-214ENST00000600840 EPDR1Q9UM22 224 aa6.36□□□□□ -1.39
TRIM28-214ENST00000600840 CRXO43186 299 aaPredicted RBP6.35□□□□□ -1.39
TRIM28-214ENST00000600840 SPRY2O43597 315 aa6.35□□□□□ -1.39
TRIM28-214ENST00000600840 TCRAP04437 139 aa6.35□□□□□ -1.39
TRIM28-214ENST00000600840 SLC25A5P05141 298 aaKnown RBP6.35□□□□□ -1.39
TRIM28-214ENST00000600840 CT45A10P0DMU9 189 aa6.35□□□□□ -1.39
TRIM28-214ENST00000600840 CNN1P51911 297 aaKnown RBP6.35□□□□□ -1.39
TRIM28-214ENST00000600840 UBE2G2P60604 165 aa6.35□□□□□ -1.39
TRIM28-214ENST00000600840 GNG5P63218 68 aa6.35□□□□□ -1.39
TRIM28-214ENST00000600840 ERCC8Q13216 396 aa6.35□□□□□ -1.39
TRIM28-214ENST00000600840 ACTL10Q5JWF8 245 aa6.35□□□□□ -1.39
TRIM28-214ENST00000600840 LINC01551Q86U37 167 aa6.35□□□□□ -1.39
TRIM28-214ENST00000600840 C5orf17Q8NAS9 161 aa6.35□□□□□ -1.39
TRIM28-214ENST00000600840 CSNK1G2-AS1Q8NCQ2 148 aa6.35□□□□□ -1.39
TRIM28-214ENST00000600840 ZNF738Q8NE65 137 aa6.35□□□□□ -1.39
TRIM28-214ENST00000600840 LINC00479Q96M42 142 aa6.35□□□□□ -1.39
TRIM28-214ENST00000600840 KRTAP4-5Q9BYR2 181 aa6.35□□□□□ -1.39
TRIM28-214ENST00000600840 AAMDCQ9H7C9 122 aa6.35□□□□□ -1.39
TRIM28-214ENST00000600840 KLF12Q9Y4X4 402 aa6.35□□□□□ -1.39
TRIM28-214ENST00000600840 AGRNO00468 2067 aa6.35□□□□□ -1.39
TRIM28-214ENST00000600840 RYR1P21817 5038 aa6.35□□□□□ -1.39
TRIM28-214ENST00000600840 IGKV2-40A0A087WW87 121 aaPredicted RBP6.34□□□□□ -1.39
TRIM28-214ENST00000600840 TGIF2-C20orf24A0A0A6YYL0 155 aa6.34□□□□□ -1.39
TRIM28-214ENST00000600840 KIR2DL5BA0A0G2JN68 375 aa6.34□□□□□ -1.39
TRIM28-214ENST00000600840 KIR2DL5BA0A0G2JPC4 375 aa6.34□□□□□ -1.39
TRIM28-214ENST00000600840 HIST1H2BKO60814 126 aa6.34□□□□□ -1.39
TRIM28-214ENST00000600840 IGKV2D-40P01614 121 aaPredicted RBP6.34□□□□□ -1.39
TRIM28-214ENST00000600840 HIST1H2BJP06899 126 aa6.34□□□□□ -1.39
TRIM28-214ENST00000600840 CXCL1P09341 107 aa6.34□□□□□ -1.39
TRIM28-214ENST00000600840 HIST1H2BOP23527 126 aa6.34□□□□□ -1.39
TRIM28-214ENST00000600840 HIST1H2BBP33778 126 aa6.34□□□□□ -1.39
TRIM28-214ENST00000600840 HIST1H2BDP58876 126 aa6.34□□□□□ -1.39
TRIM28-214ENST00000600840 TAS2R60P59551 318 aa6.34□□□□□ -1.39
TRIM28-214ENST00000600840 HIST1H2BCP62807 126 aa6.34□□□□□ -1.39
TRIM28-214ENST00000600840 HIST2H2BEQ16778 126 aa6.34□□□□□ -1.39
TRIM28-214ENST00000600840 COA6Q5JTJ3 125 aaKnown RBP6.34□□□□□ -1.39
TRIM28-214ENST00000600840 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.34□□□□□ -1.39
TRIM28-214ENST00000600840 Q6ZWC4 215 aa6.34□□□□□ -1.39
TRIM28-214ENST00000600840 KIR2DL5AQ8N109 375 aa6.34□□□□□ -1.39
TRIM28-214ENST00000600840 KIR2DL5BQ8NHK3 375 aa6.34□□□□□ -1.39
TRIM28-214ENST00000600840 HIST1H2BHQ93079 126 aa6.34□□□□□ -1.39
TRIM28-214ENST00000600840 RNF183Q96D59 192 aa6.34□□□□□ -1.39
TRIM28-214ENST00000600840 SFRP2Q96HF1 295 aa6.34□□□□□ -1.39
TRIM28-214ENST00000600840 LINC00477Q96M19 166 aa6.34□□□□□ -1.39
TRIM28-214ENST00000600840 HIST1H2BNQ99877 126 aa6.34□□□□□ -1.39
TRIM28-214ENST00000600840 HIST1H2BMQ99879 126 aa6.34□□□□□ -1.39
TRIM28-214ENST00000600840 URGCP-MRPS24S4R325 110 aa6.34□□□□□ -1.39
TRIM28-214ENST00000600840 DUSP14O95147 198 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms