RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 GNG13Q9P2W3 67 aa8.07□□□□□ -1.12
HIF3A-217ENST00000600236 VAX2Q9UIW0 290 aa8.07□□□□□ -1.12
HIF3A-217ENST00000600236 TIMM8BQ9Y5J9 83 aaPredicted RBP8.07□□□□□ -1.12
HIF3A-217ENST00000600236 VPS13DQ5THJ4 4388 aa8.07□□□□□ -1.12
HIF3A-217ENST00000600236 FRAS1Q86XX4 4008 aa8.06□□□□□ -1.12
HIF3A-217ENST00000600236 NUDT3O95989 172 aa8.06□□□□□ -1.12
HIF3A-217ENST00000600236 PRM2P04554 102 aa8.06□□□□□ -1.12
HIF3A-217ENST00000600236 STAG3L2P0CL84 134 aa8.06□□□□□ -1.12
HIF3A-217ENST00000600236 STAG3L3P0CL85 134 aa8.06□□□□□ -1.12
HIF3A-217ENST00000600236 AZU1P20160 251 aa8.06□□□□□ -1.12
HIF3A-217ENST00000600236 FGF8P55075 233 aaPredicted RBP8.06□□□□□ -1.12
HIF3A-217ENST00000600236 GCSAMLQ5JQS6 135 aa8.06□□□□□ -1.12
HIF3A-217ENST00000600236 PFDN5Q99471 154 aa8.06□□□□□ -1.12
HIF3A-217ENST00000600236 DNAH10Q8IVF4 4471 aa8.06□□□□□ -1.12
HIF3A-217ENST00000600236 A0A1W2PPV4 95 aa8.05□□□□□ -1.12
HIF3A-217ENST00000600236 PLAC8L1A1L4L8 177 aa8.05□□□□□ -1.12
HIF3A-217ENST00000600236 TMEM250H0YL14 139 aa8.05□□□□□ -1.12
HIF3A-217ENST00000600236 CLRN3Q8NCR9 226 aa8.05□□□□□ -1.12
HIF3A-217ENST00000600236 RXFP4Q8TDU9 374 aa8.05□□□□□ -1.12
HIF3A-217ENST00000600236 TMEM37Q8WXS4 190 aa8.05□□□□□ -1.12
HIF3A-217ENST00000600236 TXNDC17Q9BRA2 123 aa8.05□□□□□ -1.12
HIF3A-217ENST00000600236 MRPL32Q9BYC8 188 aaKnown RBP8.05□□□□□ -1.12
HIF3A-217ENST00000600236 KRTAP17-1Q9BYP8 105 aa8.05□□□□□ -1.12
HIF3A-217ENST00000600236 DNAJC4Q9NNZ3 241 aa8.05□□□□□ -1.12
HIF3A-217ENST00000600236 ARL2-SNX15V9GYD0 113 aa8.05□□□□□ -1.12
HIF3A-217ENST00000600236 SNURFLB1AK76 121 aa8.04□□□□□ -1.12
HIF3A-217ENST00000600236 CXorf1O96002 111 aa8.04□□□□□ -1.12
HIF3A-217ENST00000600236 SNRPCP09234 159 aaKnown RBP8.04□□□□□ -1.12
HIF3A-217ENST00000600236 IGLC2P0DOY2 106 aa8.04□□□□□ -1.12
HIF3A-217ENST00000600236 LEPP41159 167 aa8.04□□□□□ -1.12
HIF3A-217ENST00000600236 MEF2BQ02080 365 aaPredicted RBP8.04□□□□□ -1.12
HIF3A-217ENST00000600236 CYB561D1Q8N8Q1 229 aa8.04□□□□□ -1.12
HIF3A-217ENST00000600236 SUN5Q8TC36 379 aa8.04□□□□□ -1.12
HIF3A-217ENST00000600236 RNASE8Q8TDE3 154 aaKnown RBP8.04□□□□□ -1.12
HIF3A-217ENST00000600236 NOP10Q9NPE3 64 aaKnown RBP8.04□□□□□ -1.12
HIF3A-217ENST00000600236 FUT9Q9Y231 359 aa8.04□□□□□ -1.12
HIF3A-217ENST00000600236 H3BTX0 84 aa8.03□□□□□ -1.12
HIF3A-217ENST00000600236 SLC17A3O00476 420 aa8.03□□□□□ -1.12
HIF3A-217ENST00000600236 ZNF253O75346 499 aa8.03□□□□□ -1.12
HIF3A-217ENST00000600236 BTN1A1Q13410 526 aa8.03□□□□□ -1.12
HIF3A-217ENST00000600236 RHEBQ15382 184 aa8.03□□□□□ -1.12
HIF3A-217ENST00000600236 ODF3Q96PU9 254 aa8.03□□□□□ -1.12
HIF3A-217ENST00000600236 HERC2O95714 4834 aa8.03□□□□□ -1.12
HIF3A-217ENST00000600236 DNAH6Q9C0G6 4158 aa8.03□□□□□ -1.12
HIF3A-217ENST00000600236 NBDYA0A0U1RRE5 68 aa8.02□□□□□ -1.13
HIF3A-217ENST00000600236 FAM74A7A6NL05 159 aa8.02□□□□□ -1.13
HIF3A-217ENST00000600236 ARL14EPLP0DKL9 152 aa8.02□□□□□ -1.13
HIF3A-217ENST00000600236 PRB4P10163 310 aaPredicted RBP8.02□□□□□ -1.13
HIF3A-217ENST00000600236 GCHFRP30047 84 aa8.02□□□□□ -1.13
HIF3A-217ENST00000600236 TAS2R45P59539 299 aa8.02□□□□□ -1.13
HIF3A-217ENST00000600236 OR5I1Q13606 314 aa8.02□□□□□ -1.13
HIF3A-217ENST00000600236 FAM74A3Q4VXF1 159 aa8.02□□□□□ -1.13
HIF3A-217ENST00000600236 GFI1BQ5VTD9 330 aa8.02□□□□□ -1.13
HIF3A-217ENST00000600236 PQLC2Q6ZP29 291 aa8.02□□□□□ -1.13
HIF3A-217ENST00000600236 PYGO2Q9BRQ0 406 aa8.02□□□□□ -1.13
HIF3A-217ENST00000600236 TMPRSS5Q9H3S3 457 aa8.02□□□□□ -1.13
HIF3A-217ENST00000600236 PRAC2D3DTV9 90 aa8.01□□□□□ -1.13
HIF3A-217ENST00000600236 NPIPB6E9PJ23 425 aa8.01□□□□□ -1.13
HIF3A-217ENST00000600236 F6UZH7 168 aa8.01□□□□□ -1.13
HIF3A-217ENST00000600236 H3BQ15 152 aa8.01□□□□□ -1.13
HIF3A-217ENST00000600236 J3KRW8 73 aa8.01□□□□□ -1.13
HIF3A-217ENST00000600236 HMGB3O15347 200 aaKnown RBP8.01□□□□□ -1.13
HIF3A-217ENST00000600236 PDE6DO43924 150 aa8.01□□□□□ -1.13
HIF3A-217ENST00000600236 PAGE4O60829 102 aa8.01□□□□□ -1.13
HIF3A-217ENST00000600236 EIF3GO75821 320 aaKnown RBP eCLIP8.01□□□□□ -1.13
HIF3A-217ENST00000600236 PNRC1Q12796 327 aaPredicted RBP8.01□□□□□ -1.13
HIF3A-217ENST00000600236 MORN5Q5VZ52 161 aa8.01□□□□□ -1.13
HIF3A-217ENST00000600236 MIR17HGQ75NE6 70 aa8.01□□□□□ -1.13
HIF3A-217ENST00000600236 C6orf223Q8N319 242 aa8.01□□□□□ -1.13
HIF3A-217ENST00000600236 ZNRF2Q8NHG8 242 aa8.01□□□□□ -1.13
HIF3A-217ENST00000600236 MRPL53Q96EL3 112 aaKnown RBP8.01□□□□□ -1.13
HIF3A-217ENST00000600236 ZNF503Q96F45 646 aa8.01□□□□□ -1.13
HIF3A-217ENST00000600236 TMEM167BQ9NRX6 74 aa8.01□□□□□ -1.13
HIF3A-217ENST00000600236 A0A087WWC5 75 aa8□□□□□ -1.13
HIF3A-217ENST00000600236 TRAV5A0A0B4J249 113 aa8□□□□□ -1.13
HIF3A-217ENST00000600236 TRAV12-3A0A0B4J271 114 aa8□□□□□ -1.13
HIF3A-217ENST00000600236 C7orf77A4D0Y5 90 aa8□□□□□ -1.13
HIF3A-217ENST00000600236 B4DEV8 164 aa8□□□□□ -1.13
HIF3A-217ENST00000600236 PDE6HQ13956 83 aa8□□□□□ -1.13
HIF3A-217ENST00000600236 KIR3DS1Q14943 382 aa8□□□□□ -1.13
HIF3A-217ENST00000600236 TTC32Q5I0X7 151 aa8□□□□□ -1.13
HIF3A-217ENST00000600236 LINC00612Q8N6U2 182 aa8□□□□□ -1.13
HIF3A-217ENST00000600236 C11orf52Q96A22 123 aa8□□□□□ -1.13
HIF3A-217ENST00000600236 TVP23CQ96ET8 276 aa8□□□□□ -1.13
HIF3A-217ENST00000600236 FAM167A-AS1Q96KT0 104 aa8□□□□□ -1.13
HIF3A-217ENST00000600236 AAMDCQ9H7C9 122 aa8□□□□□ -1.13
HIF3A-217ENST00000600236 SMCO4Q9NRQ5 59 aa8□□□□□ -1.13
HIF3A-217ENST00000600236 ZNF586Q9NXT0 402 aa8□□□□□ -1.13
HIF3A-217ENST00000600236 TMEM14CQ9P0S9 112 aa8□□□□□ -1.13
HIF3A-217ENST00000600236 PRELID1Q9Y255 219 aa8□□□□□ -1.13
HIF3A-217ENST00000600236 LINC00588Q9Y4M8 146 aa8□□□□□ -1.13
HIF3A-217ENST00000600236 TRBV19A0A075B6N1 114 aa7.99□□□□□ -1.13
HIF3A-217ENST00000600236 TRAV26-1A0A087WT03 109 aa7.99□□□□□ -1.13
HIF3A-217ENST00000600236 GAGE12BA1L429 117 aa7.99□□□□□ -1.13
HIF3A-217ENST00000600236 GAGE7O76087 117 aa7.99□□□□□ -1.13
HIF3A-217ENST00000600236 SLC25A5P05141 298 aaKnown RBP7.99□□□□□ -1.13
HIF3A-217ENST00000600236 GAGE12FP0CL80 117 aa7.99□□□□□ -1.13
HIF3A-217ENST00000600236 GAGE12GP0CL81 117 aa7.99□□□□□ -1.13
HIF3A-217ENST00000600236 GAGE12IP0CL82 117 aa7.99□□□□□ -1.13
HIF3A-217ENST00000600236 CT45A10P0DMU9 189 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms