RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 TRBV7-9A0A0J9YWB2 115 aa10.81□□□□□ -0.68
LIG1-219ENST00000600055 TEX48A0A1B0GUV7 120 aa10.81□□□□□ -0.68
LIG1-219ENST00000600055 DAD1P61803 113 aa10.81□□□□□ -0.68
LIG1-219ENST00000600055 ZNF493Q6ZR52 646 aa10.81□□□□□ -0.68
LIG1-219ENST00000600055 CCDC28AQ8IWP9 274 aa10.81□□□□□ -0.68
LIG1-219ENST00000600055 C5orf17Q8NAS9 161 aa10.81□□□□□ -0.68
LIG1-219ENST00000600055 FAM213BQ8TBF2 198 aa10.81□□□□□ -0.68
LIG1-219ENST00000600055 TVP23CQ96ET8 276 aa10.81□□□□□ -0.68
LIG1-219ENST00000600055 SACSQ9NZJ4 4579 aa10.81□□□□□ -0.68
LIG1-219ENST00000600055 A0A1W2PRE2 83 aa10.8□□□□□ -0.68
LIG1-219ENST00000600055 LYRM9A8MSI8 78 aa10.8□□□□□ -0.68
LIG1-219ENST00000600055 IFNA7P01567 189 aa10.8□□□□□ -0.68
LIG1-219ENST00000600055 TCRAP04437 139 aa10.8□□□□□ -0.68
LIG1-219ENST00000600055 DEFB130BP0DP73 79 aa10.8□□□□□ -0.68
LIG1-219ENST00000600055 DEFB130AP0DP74 79 aa10.8□□□□□ -0.68
LIG1-219ENST00000600055 HTN3P15516 51 aa10.8□□□□□ -0.68
LIG1-219ENST00000600055 NOP10Q9NPE3 64 aaKnown RBP10.8□□□□□ -0.68
LIG1-219ENST00000600055 EPDR1Q9UM22 224 aa10.8□□□□□ -0.68
LIG1-219ENST00000600055 TIMM8BQ9Y5J9 83 aaPredicted RBP10.8□□□□□ -0.68
LIG1-219ENST00000600055 A0A1B0GV50 99 aa10.79□□□□□ -0.68
LIG1-219ENST00000600055 SULT1A2P50226 295 aa10.79□□□□□ -0.68
LIG1-219ENST00000600055 LINC00476Q8WZB0 136 aa10.79□□□□□ -0.68
LIG1-219ENST00000600055 TP53TG3Q9ULZ0 132 aa10.79□□□□□ -0.68
LIG1-219ENST00000600055 APLNQ9ULZ1 77 aa10.79□□□□□ -0.68
LIG1-219ENST00000600055 LENEPQ9Y5L5 61 aa10.79□□□□□ -0.68
LIG1-219ENST00000600055 RYR2Q92736 4967 aa10.79□□□□□ -0.68
LIG1-219ENST00000600055 IGHV4-4A0A075B6R2 117 aa10.78□□□□□ -0.68
LIG1-219ENST00000600055 CBY3A6NI87 242 aa10.78□□□□□ -0.68
LIG1-219ENST00000600055 FAM74A7A6NL05 159 aa10.78□□□□□ -0.68
LIG1-219ENST00000600055 F6UZH7 168 aa10.78□□□□□ -0.68
LIG1-219ENST00000600055 RGS13O14921 159 aa10.78□□□□□ -0.68
LIG1-219ENST00000600055 H2AFB1P0C5Y9 115 aa10.78□□□□□ -0.68
LIG1-219ENST00000600055 BLOC1S1P78537 153 aa10.78□□□□□ -0.68
LIG1-219ENST00000600055 EIF4E3Q8N5X7 224 aaKnown RBP10.78□□□□□ -0.68
LIG1-219ENST00000600055 SFT2D1Q8WV19 159 aa10.78□□□□□ -0.68
LIG1-219ENST00000600055 MBD3L1Q8WWY6 194 aa10.78□□□□□ -0.68
LIG1-219ENST00000600055 LINC00467Q9BRT7 94 aa10.78□□□□□ -0.68
LIG1-219ENST00000600055 ALMS1Q8TCU4 4167 aa10.78□□□□□ -0.68
LIG1-219ENST00000600055 IGHV1OR15-1A0A075B7D0 117 aa10.77□□□□□ -0.69
LIG1-219ENST00000600055 SERTM2A0A1B0GWG4 89 aa10.77□□□□□ -0.69
LIG1-219ENST00000600055 LY6G6CO95867 125 aa10.77□□□□□ -0.69
LIG1-219ENST00000600055 IGLV2-11P01706 119 aa10.77□□□□□ -0.69
LIG1-219ENST00000600055 PPT1P50897 306 aa10.77□□□□□ -0.69
LIG1-219ENST00000600055 ANXA2RQ3ZCQ2 193 aa10.77□□□□□ -0.69
LIG1-219ENST00000600055 MUC21Q5SSG8 566 aa10.77□□□□□ -0.69
LIG1-219ENST00000600055 Q6AWC8 147 aa10.77□□□□□ -0.69
LIG1-219ENST00000600055 CYB561D1Q8N8Q1 229 aa10.77□□□□□ -0.69
LIG1-219ENST00000600055 C11orf72Q8NBR9 251 aa10.77□□□□□ -0.69
LIG1-219ENST00000600055 LINC00479Q96M42 142 aa10.77□□□□□ -0.69
LIG1-219ENST00000600055 C8orf49Q96NF6 230 aa10.77□□□□□ -0.69
LIG1-219ENST00000600055 TREM1Q9NP99 234 aa10.77□□□□□ -0.69
LIG1-219ENST00000600055 GSN-AS1Q9NRJ2 163 aa10.77□□□□□ -0.69
LIG1-219ENST00000600055 PSG8Q9UQ74 426 aa10.77□□□□□ -0.69
LIG1-219ENST00000600055 TRAV34A0A0B4J273 112 aa10.76□□□□□ -0.69
LIG1-219ENST00000600055 SNURFLB1AK76 121 aa10.76□□□□□ -0.69
LIG1-219ENST00000600055 TEX261Q6UWH6 196 aa10.76□□□□□ -0.69
LIG1-219ENST00000600055 ALKAL2Q6UX46 152 aa10.76□□□□□ -0.69
LIG1-219ENST00000600055 ATG101Q9BSB4 218 aa10.76□□□□□ -0.69
LIG1-219ENST00000600055 KLF12Q9Y4X4 402 aa10.76□□□□□ -0.69
LIG1-219ENST00000600055 DNAH1Q9P2D7 4330 aa10.75□□□□□ -0.69
LIG1-219ENST00000600055 K7EQM0 130 aa10.75□□□□□ -0.69
LIG1-219ENST00000600055 FLI1Q01543 452 aaPredicted RBP10.75□□□□□ -0.69
LIG1-219ENST00000600055 PRNTQ86SH4 94 aa10.75□□□□□ -0.69
LIG1-219ENST00000600055 ZNF680Q8NEM1 530 aa10.75□□□□□ -0.69
LIG1-219ENST00000600055 HYDINQ4G0P3 5121 aa10.74□□□□□ -0.69
LIG1-219ENST00000600055 TRAV1-1A0A0B4J248 108 aa10.74□□□□□ -0.69
LIG1-219ENST00000600055 GAGE12BA1L429 117 aa10.74□□□□□ -0.69
LIG1-219ENST00000600055 PEX7O00628 323 aa10.74□□□□□ -0.69
LIG1-219ENST00000600055 PAGE4O60829 102 aa10.74□□□□□ -0.69
LIG1-219ENST00000600055 GAGE7O76087 117 aa10.74□□□□□ -0.69
LIG1-219ENST00000600055 GAGE12FP0CL80 117 aa10.74□□□□□ -0.69
LIG1-219ENST00000600055 GAGE12GP0CL81 117 aa10.74□□□□□ -0.69
LIG1-219ENST00000600055 GAGE12IP0CL82 117 aa10.74□□□□□ -0.69
LIG1-219ENST00000600055 ATP5G3P48201 142 aa10.74□□□□□ -0.69
LIG1-219ENST00000600055 ZNF80P51504 273 aaPredicted RBP10.74□□□□□ -0.69
LIG1-219ENST00000600055 TCTAP57738 103 aa10.74□□□□□ -0.69
LIG1-219ENST00000600055 DAZ2Q13117 558 aaKnown RBP10.74□□□□□ -0.69
LIG1-219ENST00000600055 CST9LP1Q5W188 147 aa10.74□□□□□ -0.69
LIG1-219ENST00000600055 Q6ZTI0 123 aa10.74□□□□□ -0.69
LIG1-219ENST00000600055 LINC00612Q8N6U2 182 aa10.74□□□□□ -0.69
LIG1-219ENST00000600055 TMEM75Q8N9X5 138 aa10.74□□□□□ -0.69
LIG1-219ENST00000600055 NKX6-2Q9C056 277 aaPredicted RBP10.74□□□□□ -0.69
LIG1-219ENST00000600055 NAGKQ9UJ70 344 aa10.74□□□□□ -0.69
LIG1-219ENST00000600055 TCL1AP56279 114 aa10.73□□□□□ -0.69
LIG1-219ENST00000600055 RAB14P61106 215 aa10.73□□□□□ -0.69
LIG1-219ENST00000600055 NDFIP1Q9BT67 221 aa10.73□□□□□ -0.69
LIG1-219ENST00000600055 NDUFAF3Q9BU61 184 aa10.73□□□□□ -0.69
LIG1-219ENST00000600055 MDFICQ9P1T7 246 aa10.73□□□□□ -0.69
LIG1-219ENST00000600055 TRAV21A0A0B4J279 112 aa10.72□□□□□ -0.69
LIG1-219ENST00000600055 F5H768 121 aa10.72□□□□□ -0.69
LIG1-219ENST00000600055 ATP5G1P05496 136 aa10.72□□□□□ -0.69
LIG1-219ENST00000600055 TAGLN2P37802 199 aaKnown RBP10.72□□□□□ -0.69
LIG1-219ENST00000600055 CCL20P78556 96 aa10.72□□□□□ -0.69
LIG1-219ENST00000600055 TMEM183BQ1AE95 376 aa10.72□□□□□ -0.69
LIG1-219ENST00000600055 IBA57Q5T440 356 aaKnown RBP10.72□□□□□ -0.69
LIG1-219ENST00000600055 LGALS9CQ6DKI2 356 aa10.72□□□□□ -0.69
LIG1-219ENST00000600055 TMEM88Q6PEY1 159 aa10.72□□□□□ -0.69
LIG1-219ENST00000600055 FAM159AQ6UWV7 190 aa10.72□□□□□ -0.69
LIG1-219ENST00000600055 TMEM183AQ8IXX5 376 aa10.72□□□□□ -0.69
LIG1-219ENST00000600055 HIST1H2BAQ96A08 127 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms