RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 Q6ZTC4 211 aa10□□□□□ -0.81
SHKBP1-218ENST00000598907 APRG1Q8IVJ8 170 aa10□□□□□ -0.81
SHKBP1-218ENST00000598907 OR8A1Q8NGG7 326 aa10□□□□□ -0.81
SHKBP1-218ENST00000598907 CLUHP3Q96NS8 147 aa10□□□□□ -0.81
SHKBP1-218ENST00000598907 ATG101Q9BSB4 218 aa10□□□□□ -0.81
SHKBP1-218ENST00000598907 EIF5A2Q9GZV4 153 aaKnown RBP10□□□□□ -0.81
SHKBP1-218ENST00000598907 SMDT1Q9H4I9 107 aa10□□□□□ -0.81
SHKBP1-218ENST00000598907 TRAV10A0A0B4J240 114 aa9.99□□□□□ -0.81
SHKBP1-218ENST00000598907 NPIPB6E9PJ23 425 aa9.99□□□□□ -0.81
SHKBP1-218ENST00000598907 F6UZH7 168 aa9.99□□□□□ -0.81
SHKBP1-218ENST00000598907 HLA-DRB4P13762 266 aa9.99□□□□□ -0.81
SHKBP1-218ENST00000598907 C9orf47Q6ZRZ4 202 aa9.99□□□□□ -0.81
SHKBP1-218ENST00000598907 GOLT1AQ6ZVE7 132 aa9.99□□□□□ -0.81
SHKBP1-218ENST00000598907 EIF4E3Q8N5X7 224 aaKnown RBP9.99□□□□□ -0.81
SHKBP1-218ENST00000598907 PPP1R14DQ9NXH3 145 aa9.99□□□□□ -0.81
SHKBP1-218ENST00000598907 KLF12Q9Y4X4 402 aa9.99□□□□□ -0.81
SHKBP1-218ENST00000598907 HLA-DRB4X5D2U9 266 aa9.99□□□□□ -0.81
SHKBP1-218ENST00000598907 IGKV2-40A0A087WW87 121 aaPredicted RBP9.98□□□□□ -0.81
SHKBP1-218ENST00000598907 SCO2A0A1W2PP80 73 aa9.98□□□□□ -0.81
SHKBP1-218ENST00000598907 KNCNA6PVL3 124 aa9.98□□□□□ -0.81
SHKBP1-218ENST00000598907 C9JQL5 133 aa9.98□□□□□ -0.81
SHKBP1-218ENST00000598907 TMEM250H0YL14 139 aa9.98□□□□□ -0.81
SHKBP1-218ENST00000598907 H3BMM0 161 aa9.98□□□□□ -0.81
SHKBP1-218ENST00000598907 IGKV2D-40P01614 121 aaPredicted RBP9.98□□□□□ -0.81
SHKBP1-218ENST00000598907 IGLV2-11P01706 119 aa9.98□□□□□ -0.81
SHKBP1-218ENST00000598907 SRP19P09132 144 aaKnown RBP9.98□□□□□ -0.81
SHKBP1-218ENST00000598907 ZNF705DP0CH99 300 aaPredicted RBP9.98□□□□□ -0.81
SHKBP1-218ENST00000598907 ZNF705BP0CI00 300 aaPredicted RBP9.98□□□□□ -0.81
SHKBP1-218ENST00000598907 PRB4P10163 310 aaPredicted RBP9.98□□□□□ -0.81
SHKBP1-218ENST00000598907 PEA15Q15121 130 aa9.98□□□□□ -0.81
SHKBP1-218ENST00000598907 EBLN2Q6P2I7 272 aa9.98□□□□□ -0.81
SHKBP1-218ENST00000598907 UBE2DNLQ8IWF7 75 aa9.98□□□□□ -0.81
SHKBP1-218ENST00000598907 CYB561D1Q8N8Q1 229 aa9.98□□□□□ -0.81
SHKBP1-218ENST00000598907 VGLL1Q99990 258 aa9.98□□□□□ -0.81
SHKBP1-218ENST00000598907 AGPAT4-IT1Q9H0P7 198 aa9.98□□□□□ -0.81
SHKBP1-218ENST00000598907 CSTL1Q9H114 145 aa9.98□□□□□ -0.81
SHKBP1-218ENST00000598907 TRBV6-1A0A0K0K1D8 114 aa9.97□□□□□ -0.81
SHKBP1-218ENST00000598907 DUSP14O95147 198 aaKnown RBP9.97□□□□□ -0.81
SHKBP1-218ENST00000598907 INAFM2P0DMQ5 153 aa9.97□□□□□ -0.81
SHKBP1-218ENST00000598907 CNN1P51911 297 aaKnown RBP9.97□□□□□ -0.81
SHKBP1-218ENST00000598907 ERCC8Q13216 396 aa9.97□□□□□ -0.81
SHKBP1-218ENST00000598907 ACTL10Q5JWF8 245 aa9.97□□□□□ -0.81
SHKBP1-218ENST00000598907 TRPT1Q86TN4 253 aaKnown RBP9.97□□□□□ -0.81
SHKBP1-218ENST00000598907 TMEM75Q8N9X5 138 aa9.97□□□□□ -0.81
SHKBP1-218ENST00000598907 OR10J6PQ8NGY7 276 aa9.97□□□□□ -0.81
SHKBP1-218ENST00000598907 FAM19A4Q96LR4 140 aa9.97□□□□□ -0.81
SHKBP1-218ENST00000598907 LINC00477Q96M19 166 aa9.97□□□□□ -0.81
SHKBP1-218ENST00000598907 LINC00479Q96M42 142 aa9.97□□□□□ -0.81
SHKBP1-218ENST00000598907 RPH3ALQ9UNE2 315 aa9.97□□□□□ -0.81
SHKBP1-218ENST00000598907 FBLL1A6NHQ2 334 aaKnown RBP9.96□□□□□ -0.82
SHKBP1-218ENST00000598907 K7EQM0 130 aa9.96□□□□□ -0.82
SHKBP1-218ENST00000598907 AMBPP02760 352 aa9.96□□□□□ -0.82
SHKBP1-218ENST00000598907 RBMY1A1P0DJD3 496 aaKnown RBP9.96□□□□□ -0.82
SHKBP1-218ENST00000598907 CT45A10P0DMU9 189 aa9.96□□□□□ -0.82
SHKBP1-218ENST00000598907 HIST1H1AQ02539 215 aaPredicted RBP9.96□□□□□ -0.82
SHKBP1-218ENST00000598907 TNP2Q05952 138 aa9.96□□□□□ -0.82
SHKBP1-218ENST00000598907 TMEM183BQ1AE95 376 aa9.96□□□□□ -0.82
SHKBP1-218ENST00000598907 C1orf134Q5TEV5 83 aa9.96□□□□□ -0.82
SHKBP1-218ENST00000598907 UQCC3Q6UW78 93 aa9.96□□□□□ -0.82
SHKBP1-218ENST00000598907 AMTNQ6UX39 209 aa9.96□□□□□ -0.82
SHKBP1-218ENST00000598907 Q6ZR54 194 aa9.96□□□□□ -0.82
SHKBP1-218ENST00000598907 COMMD7Q86VX2 200 aa9.96□□□□□ -0.82
SHKBP1-218ENST00000598907 ZNF492Q9P255 531 aa9.96□□□□□ -0.82
SHKBP1-218ENST00000598907 TRAV8-1A0A0A6YYK1 113 aa9.95□□□□□ -0.82
SHKBP1-218ENST00000598907 TRBV7-9A0A0J9YWB2 115 aa9.95□□□□□ -0.82
SHKBP1-218ENST00000598907 CA1P00915 261 aaPredicted RBP9.95□□□□□ -0.82
SHKBP1-218ENST00000598907 S100A9P06702 114 aaKnown RBP9.95□□□□□ -0.82
SHKBP1-218ENST00000598907 FMC1Q96HJ9 113 aa9.95□□□□□ -0.82
SHKBP1-218ENST00000598907 ODF3Q96PU9 254 aa9.95□□□□□ -0.82
SHKBP1-218ENST00000598907 PSG8Q9UQ74 426 aa9.95□□□□□ -0.82
SHKBP1-218ENST00000598907 LENEPQ9Y5L5 61 aa9.95□□□□□ -0.82
SHKBP1-218ENST00000598907 MYCBP2O75592 4640 aa9.95□□□□□ -0.82
SHKBP1-218ENST00000598907 TRAV34A0A0B4J273 112 aa9.94□□□□□ -0.82
SHKBP1-218ENST00000598907 EPM2AB3EWF7 344 aa9.94□□□□□ -0.82
SHKBP1-218ENST00000598907 RBMY1CP0DJD4 496 aa9.94□□□□□ -0.82
SHKBP1-218ENST00000598907 AKR1C3P42330 323 aa9.94□□□□□ -0.82
SHKBP1-218ENST00000598907 ZNF138P52744 262 aa9.94□□□□□ -0.82
SHKBP1-218ENST00000598907 TAS2R60P59551 318 aa9.94□□□□□ -0.82
SHKBP1-218ENST00000598907 FLI1Q01543 452 aaPredicted RBP9.94□□□□□ -0.82
SHKBP1-218ENST00000598907 TMEM78Q5T7P6 136 aa9.94□□□□□ -0.82
SHKBP1-218ENST00000598907 STHQ8IWL8 128 aa9.94□□□□□ -0.82
SHKBP1-218ENST00000598907 Q8NAQ8 132 aa9.94□□□□□ -0.82
SHKBP1-218ENST00000598907 TVP23CQ96ET8 276 aa9.94□□□□□ -0.82
SHKBP1-218ENST00000598907 SGK494Q96LW2 274 aa9.94□□□□□ -0.82
SHKBP1-218ENST00000598907 DERL1Q9BUN8 251 aa9.94□□□□□ -0.82
SHKBP1-218ENST00000598907 SLC35B3Q9H1N7 401 aa9.94□□□□□ -0.82
SHKBP1-218ENST00000598907 IGHV4-28A0A0C4DH34 117 aa9.93□□□□□ -0.82
SHKBP1-218ENST00000598907 CRISP2P16562 243 aa9.93□□□□□ -0.82
SHKBP1-218ENST00000598907 RPL35P42766 123 aaKnown RBP9.93□□□□□ -0.82
SHKBP1-218ENST00000598907 COX8CQ7Z4L0 72 aa9.93□□□□□ -0.82
SHKBP1-218ENST00000598907 Q86TA4 180 aa9.93□□□□□ -0.82
SHKBP1-218ENST00000598907 OR4B1Q8NGF8 309 aa9.93□□□□□ -0.82
SHKBP1-218ENST00000598907 IGF2BP2-AS1Q96M15 143 aa9.93□□□□□ -0.82
SHKBP1-218ENST00000598907 NDUFAF3Q9BU61 184 aa9.93□□□□□ -0.82
SHKBP1-218ENST00000598907 PARLQ9H300 379 aa9.93□□□□□ -0.82
SHKBP1-218ENST00000598907 TREM1Q9NP99 234 aa9.93□□□□□ -0.82
SHKBP1-218ENST00000598907 TRBV20OR9-2A0A075B6H5 130 aa9.92□□□□□ -0.82
SHKBP1-218ENST00000598907 DEFB131BA0A096LNP1 70 aa9.92□□□□□ -0.82
SHKBP1-218ENST00000598907 LTAP01374 205 aa9.92□□□□□ -0.82
SHKBP1-218ENST00000598907 UBE2G1P62253 170 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms