RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 EPDR1Q9UM22 224 aa12.47□□□□□ -0.41
USHBP1-209ENST00000598570 IGHV4-4A0A075B6R2 117 aa12.46□□□□□ -0.41
USHBP1-209ENST00000598570 EIF5AP63241 154 aaKnown RBP12.46□□□□□ -0.41
USHBP1-209ENST00000598570 TDRG1Q3Y452 100 aa12.46□□□□□ -0.41
USHBP1-209ENST00000598570 Q6ZQT7 251 aa12.46□□□□□ -0.41
USHBP1-209ENST00000598570 GOLT1AQ6ZVE7 132 aa12.46□□□□□ -0.41
USHBP1-209ENST00000598570 CCDC28AQ8IWP9 274 aa12.46□□□□□ -0.41
USHBP1-209ENST00000598570 EIF4E3Q8N5X7 224 aaKnown RBP12.46□□□□□ -0.41
USHBP1-209ENST00000598570 HYLS1Q96M11 299 aa12.46□□□□□ -0.41
USHBP1-209ENST00000598570 ARL2-SNX15V9GYD0 113 aa12.46□□□□□ -0.41
USHBP1-209ENST00000598570 KANTRA0A1W2PQU2 76 aa12.45□□□□□ -0.42
USHBP1-209ENST00000598570 FBLL1A6NHQ2 334 aaKnown RBP12.45□□□□□ -0.42
USHBP1-209ENST00000598570 IGLL5B9A064 214 aa12.45□□□□□ -0.42
USHBP1-209ENST00000598570 FHITP49789 147 aa12.45□□□□□ -0.42
USHBP1-209ENST00000598570 DAD1P61803 113 aa12.45□□□□□ -0.42
USHBP1-209ENST00000598570 SUMO1P63165 101 aaKnown RBP12.45□□□□□ -0.42
USHBP1-209ENST00000598570 IBA57Q5T440 356 aaKnown RBP12.45□□□□□ -0.42
USHBP1-209ENST00000598570 ZNF680Q8NEM1 530 aa12.45□□□□□ -0.42
USHBP1-209ENST00000598570 TMPRSS5Q9H3S3 457 aa12.45□□□□□ -0.42
USHBP1-209ENST00000598570 KMT2AQ03164 3969 aa12.44□□□□□ -0.42
USHBP1-209ENST00000598570 FAM74A7A6NL05 159 aa12.44□□□□□ -0.42
USHBP1-209ENST00000598570 ZNF471Q9BX82 626 aaPredicted RBP12.44□□□□□ -0.42
USHBP1-209ENST00000598570 NOP10Q9NPE3 64 aaKnown RBP12.44□□□□□ -0.42
USHBP1-209ENST00000598570 IGHV1OR15-1A0A075B7D0 117 aa12.43□□□□□ -0.42
USHBP1-209ENST00000598570 TRAV8-1A0A0A6YYK1 113 aa12.43□□□□□ -0.42
USHBP1-209ENST00000598570 MAP1LC3B2A6NCE7 125 aa12.43□□□□□ -0.42
USHBP1-209ENST00000598570 J3KRW8 73 aa12.43□□□□□ -0.42
USHBP1-209ENST00000598570 HTN1P15515 57 aa12.43□□□□□ -0.42
USHBP1-209ENST00000598570 GNG5P63218 68 aa12.43□□□□□ -0.42
USHBP1-209ENST00000598570 COX8CQ7Z4L0 72 aa12.43□□□□□ -0.42
USHBP1-209ENST00000598570 ATG101Q9BSB4 218 aa12.43□□□□□ -0.42
USHBP1-209ENST00000598570 MAP1LC3BQ9GZQ8 125 aa12.43□□□□□ -0.42
USHBP1-209ENST00000598570 TRAV1-1A0A0B4J248 108 aa12.42□□□□□ -0.42
USHBP1-209ENST00000598570 TPT1P13693 172 aaKnown RBP12.42□□□□□ -0.42
USHBP1-209ENST00000598570 TCL1AP56279 114 aa12.42□□□□□ -0.42
USHBP1-209ENST00000598570 CYB561D1Q8N8Q1 229 aa12.42□□□□□ -0.42
USHBP1-209ENST00000598570 TMEM75Q8N9X5 138 aa12.42□□□□□ -0.42
USHBP1-209ENST00000598570 TCEAL7Q9BRU2 100 aa12.42□□□□□ -0.42
USHBP1-209ENST00000598570 KLF12Q9Y4X4 402 aa12.42□□□□□ -0.42
USHBP1-209ENST00000598570 SPINK4O60575 86 aa12.41□□□□□ -0.42
USHBP1-209ENST00000598570 FGF8P55075 233 aaPredicted RBP12.41□□□□□ -0.42
USHBP1-209ENST00000598570 LGALS9BQ3B8N2 356 aa12.41□□□□□ -0.42
USHBP1-209ENST00000598570 NDUFAF3Q9BU61 184 aa12.41□□□□□ -0.42
USHBP1-209ENST00000598570 DNAH6Q9C0G6 4158 aa12.4□□□□□ -0.42
USHBP1-209ENST00000598570 TRBV6-1A0A0K0K1D8 114 aa12.4□□□□□ -0.42
USHBP1-209ENST00000598570 K7EQM0 130 aa12.4□□□□□ -0.42
USHBP1-209ENST00000598570 DEFB130BP0DP73 79 aa12.4□□□□□ -0.42
USHBP1-209ENST00000598570 DEFB130AP0DP74 79 aa12.4□□□□□ -0.42
USHBP1-209ENST00000598570 AKAP14Q86UN6 197 aa12.4□□□□□ -0.42
USHBP1-209ENST00000598570 HIST1H2BAQ96A08 127 aa12.4□□□□□ -0.42
USHBP1-209ENST00000598570 GSN-AS1Q9NRJ2 163 aa12.4□□□□□ -0.42
USHBP1-209ENST00000598570 PSG8Q9UQ74 426 aa12.4□□□□□ -0.42
USHBP1-209ENST00000598570 MUC4Q99102 2169 aa12.39□□□□□ -0.43
USHBP1-209ENST00000598570 RGS13O14921 159 aa12.39□□□□□ -0.43
USHBP1-209ENST00000598570 PFDN1O60925 122 aa12.39□□□□□ -0.43
USHBP1-209ENST00000598570 LY6G6CO95867 125 aa12.39□□□□□ -0.43
USHBP1-209ENST00000598570 ATP5G1P05496 136 aa12.39□□□□□ -0.43
USHBP1-209ENST00000598570 ATP5G3P48201 142 aa12.39□□□□□ -0.43
USHBP1-209ENST00000598570 RAB5CP51148 216 aa12.39□□□□□ -0.43
USHBP1-209ENST00000598570 FLI1Q01543 452 aaPredicted RBP12.39□□□□□ -0.43
USHBP1-209ENST00000598570 TREM1Q9NP99 234 aa12.39□□□□□ -0.43
USHBP1-209ENST00000598570 SNURFLB1AK76 121 aa12.38□□□□□ -0.43
USHBP1-209ENST00000598570 SAPCD1Q5SSQ6 148 aa12.38□□□□□ -0.43
USHBP1-209ENST00000598570 EIF5AL1Q6IS14 154 aaKnown RBP12.38□□□□□ -0.43
USHBP1-209ENST00000598570 SLC51BQ86UW2 128 aa12.38□□□□□ -0.43
USHBP1-209ENST00000598570 C9orf62Q8N4C0 152 aa12.38□□□□□ -0.43
USHBP1-209ENST00000598570 SFT2D1Q8WV19 159 aa12.38□□□□□ -0.43
USHBP1-209ENST00000598570 TRAV21A0A0B4J279 112 aa12.37□□□□□ -0.43
USHBP1-209ENST00000598570 H3BNG1 76 aa12.37□□□□□ -0.43
USHBP1-209ENST00000598570 ZNF80P51504 273 aaPredicted RBP12.37□□□□□ -0.43
USHBP1-209ENST00000598570 Q6ZTI0 123 aa12.37□□□□□ -0.43
USHBP1-209ENST00000598570 FAM213BQ8TBF2 198 aa12.37□□□□□ -0.43
USHBP1-209ENST00000598570 LINC00479Q96M42 142 aa12.37□□□□□ -0.43
USHBP1-209ENST00000598570 PEX7O00628 323 aa12.36□□□□□ -0.43
USHBP1-209ENST00000598570 H2AFB1P0C5Y9 115 aa12.36□□□□□ -0.43
USHBP1-209ENST00000598570 SULT1A2P50226 295 aa12.36□□□□□ -0.43
USHBP1-209ENST00000598570 TMEM88Q6PEY1 159 aa12.36□□□□□ -0.43
USHBP1-209ENST00000598570 C15orf53Q8NAA6 179 aa12.36□□□□□ -0.43
USHBP1-209ENST00000598570 RASL10AQ92737 203 aa12.36□□□□□ -0.43
USHBP1-209ENST00000598570 MDFICQ9P1T7 246 aa12.36□□□□□ -0.43
USHBP1-209ENST00000598570 C11orf21Q9P2W6 132 aa12.36□□□□□ -0.43
USHBP1-209ENST00000598570 RPH3ALQ9UNE2 315 aa12.36□□□□□ -0.43
USHBP1-209ENST00000598570 A0A1B0GVG6 124 aa12.35□□□□□ -0.43
USHBP1-209ENST00000598570 P0DMU3 169 aa12.35□□□□□ -0.43
USHBP1-209ENST00000598570 FAM231AP0DMU4 169 aa12.35□□□□□ -0.43
USHBP1-209ENST00000598570 FAM231CP0DMU5 169 aa12.35□□□□□ -0.43
USHBP1-209ENST00000598570 UBE2G2P60604 165 aa12.35□□□□□ -0.43
USHBP1-209ENST00000598570 FAM159AQ6UWV7 190 aa12.35□□□□□ -0.43
USHBP1-209ENST00000598570 SGK494Q96LW2 274 aa12.35□□□□□ -0.43
USHBP1-209ENST00000598570 SPXQ9BT56 116 aa12.35□□□□□ -0.43
USHBP1-209ENST00000598570 NDFIP1Q9BT67 221 aa12.35□□□□□ -0.43
USHBP1-209ENST00000598570 IGHV3-16A0A0C4DH30 117 aa12.34□□□□□ -0.43
USHBP1-209ENST00000598570 GAGE12BA1L429 117 aa12.34□□□□□ -0.43
USHBP1-209ENST00000598570 GAGE7O76087 117 aa12.34□□□□□ -0.43
USHBP1-209ENST00000598570 PFN1P07737 140 aaKnown RBP12.34□□□□□ -0.43
USHBP1-209ENST00000598570 GAGE12FP0CL80 117 aa12.34□□□□□ -0.43
USHBP1-209ENST00000598570 GAGE12GP0CL81 117 aa12.34□□□□□ -0.43
USHBP1-209ENST00000598570 GAGE12IP0CL82 117 aa12.34□□□□□ -0.43
USHBP1-209ENST00000598570 HOXA5P20719 270 aa12.34□□□□□ -0.43
USHBP1-209ENST00000598570 PPT1P50897 306 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms