RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 FAM3BP58499 235 aaPredicted RBP11.69□□□□□ -0.54
USHBP1-208ENST00000598309 ST6GAL2Q96JF0 529 aa11.69□□□□□ -0.54
USHBP1-208ENST00000598309 ACTR3CQ9C0K3 210 aaPredicted RBP11.69□□□□□ -0.54
USHBP1-208ENST00000598309 GSN-AS1Q9NRJ2 163 aa11.69□□□□□ -0.54
USHBP1-208ENST00000598309 SERTM2A0A1B0GWG4 89 aa11.68□□□□□ -0.54
USHBP1-208ENST00000598309 TAAR5O14804 337 aa11.68□□□□□ -0.54
USHBP1-208ENST00000598309 GCHFRP30047 84 aa11.68□□□□□ -0.54
USHBP1-208ENST00000598309 Q6AWC8 147 aa11.68□□□□□ -0.54
USHBP1-208ENST00000598309 Q6ZTI0 123 aa11.68□□□□□ -0.54
USHBP1-208ENST00000598309 ARPC5LQ9BPX5 153 aa11.68□□□□□ -0.54
USHBP1-208ENST00000598309 TMEM167BQ9NRX6 74 aa11.68□□□□□ -0.54
USHBP1-208ENST00000598309 ARPC5O15511 151 aa11.67□□□□□ -0.54
USHBP1-208ENST00000598309 CXorf1O96002 111 aa11.67□□□□□ -0.54
USHBP1-208ENST00000598309 GOLT1AQ6ZVE7 132 aa11.67□□□□□ -0.54
USHBP1-208ENST00000598309 C5orf17Q8NAS9 161 aa11.67□□□□□ -0.54
USHBP1-208ENST00000598309 RPH3ALQ9UNE2 315 aa11.67□□□□□ -0.54
USHBP1-208ENST00000598309 SPINK4O60575 86 aa11.66□□□□□ -0.54
USHBP1-208ENST00000598309 LGALS9BQ3B8N2 356 aa11.66□□□□□ -0.54
USHBP1-208ENST00000598309 Q6ZQT7 251 aa11.66□□□□□ -0.54
USHBP1-208ENST00000598309 TMPRSS5Q9H3S3 457 aa11.66□□□□□ -0.54
USHBP1-208ENST00000598309 KLF12Q9Y4X4 402 aa11.66□□□□□ -0.54
USHBP1-208ENST00000598309 TRGV2A0A075B6R0 118 aa11.65□□□□□ -0.54
USHBP1-208ENST00000598309 TRGV1A0A0A0MS02 117 aa11.65□□□□□ -0.54
USHBP1-208ENST00000598309 H3BNG1 76 aa11.65□□□□□ -0.54
USHBP1-208ENST00000598309 NUDT3O95989 172 aa11.65□□□□□ -0.54
USHBP1-208ENST00000598309 HOXA5P20719 270 aa11.65□□□□□ -0.54
USHBP1-208ENST00000598309 ZNF415Q09FC8 603 aa11.65□□□□□ -0.54
USHBP1-208ENST00000598309 OR5I1Q13606 314 aa11.65□□□□□ -0.54
USHBP1-208ENST00000598309 ATG101Q9BSB4 218 aa11.65□□□□□ -0.54
USHBP1-208ENST00000598309 TP53TG3Q9ULZ0 132 aa11.65□□□□□ -0.54
USHBP1-208ENST00000598309 TRAV26-1A0A087WT03 109 aa11.64□□□□□ -0.55
USHBP1-208ENST00000598309 CTXND1A0A1B0GTU2 59 aa11.64□□□□□ -0.55
USHBP1-208ENST00000598309 TCRAP04437 139 aa11.64□□□□□ -0.55
USHBP1-208ENST00000598309 GNG5P63218 68 aa11.64□□□□□ -0.55
USHBP1-208ENST00000598309 ZNF345Q14585 488 aa11.64□□□□□ -0.55
USHBP1-208ENST00000598309 TDRG1Q3Y452 100 aa11.64□□□□□ -0.55
USHBP1-208ENST00000598309 SSX7Q7RTT5 188 aa11.64□□□□□ -0.55
USHBP1-208ENST00000598309 CYTL1Q9NRR1 136 aa11.64□□□□□ -0.55
USHBP1-208ENST00000598309 DNAH10Q8IVF4 4471 aa11.64□□□□□ -0.55
USHBP1-208ENST00000598309 TRGV11A0A075B6L2 103 aa11.63□□□□□ -0.55
USHBP1-208ENST00000598309 TRAV8-1A0A0A6YYK1 113 aa11.63□□□□□ -0.55
USHBP1-208ENST00000598309 A0A1W2PRE2 83 aa11.63□□□□□ -0.55
USHBP1-208ENST00000598309 K7EQM0 130 aa11.63□□□□□ -0.55
USHBP1-208ENST00000598309 CCL18P55774 89 aa11.63□□□□□ -0.55
USHBP1-208ENST00000598309 MUC21Q5SSG8 566 aa11.63□□□□□ -0.55
USHBP1-208ENST00000598309 AKR1C8PQ5T2L2 129 aa11.63□□□□□ -0.55
USHBP1-208ENST00000598309 FAM159AQ6UWV7 190 aa11.63□□□□□ -0.55
USHBP1-208ENST00000598309 Q6ZR54 194 aa11.63□□□□□ -0.55
USHBP1-208ENST00000598309 LINC00336Q6ZUF6 198 aa11.63□□□□□ -0.55
USHBP1-208ENST00000598309 NDFIP1Q9BT67 221 aa11.63□□□□□ -0.55
USHBP1-208ENST00000598309 TREM1Q9NP99 234 aa11.63□□□□□ -0.55
USHBP1-208ENST00000598309 TRAV21A0A0B4J279 112 aa11.62□□□□□ -0.55
USHBP1-208ENST00000598309 FBLL1A6NHQ2 334 aaKnown RBP11.62□□□□□ -0.55
USHBP1-208ENST00000598309 GGTLC3B5MD39 225 aa11.62□□□□□ -0.55
USHBP1-208ENST00000598309 SMLR1H3BR10 107 aa11.62□□□□□ -0.55
USHBP1-208ENST00000598309 ZNF726P1Q15940 193 aa11.62□□□□□ -0.55
USHBP1-208ENST00000598309 TVP23CQ96ET8 276 aa11.62□□□□□ -0.55
USHBP1-208ENST00000598309 IGLV2-18A0A075B6J9 118 aa11.61□□□□□ -0.55
USHBP1-208ENST00000598309 HMSDA8MTL9 139 aa11.61□□□□□ -0.55
USHBP1-208ENST00000598309 M0R2N4 97 aa11.61□□□□□ -0.55
USHBP1-208ENST00000598309 SUMO1P63165 101 aaKnown RBP11.61□□□□□ -0.55
USHBP1-208ENST00000598309 IQCF2Q8IXL9 164 aa11.61□□□□□ -0.55
USHBP1-208ENST00000598309 KCNRGQ8N5I3 272 aa11.61□□□□□ -0.55
USHBP1-208ENST00000598309 CYB561D1Q8N8Q1 229 aa11.61□□□□□ -0.55
USHBP1-208ENST00000598309 SPXQ9BT56 116 aa11.61□□□□□ -0.55
USHBP1-208ENST00000598309 MRPL16Q9NX20 251 aaKnown RBP11.61□□□□□ -0.55
USHBP1-208ENST00000598309 EPDR1Q9UM22 224 aa11.61□□□□□ -0.55
USHBP1-208ENST00000598309 FRAS1Q86XX4 4008 aa11.61□□□□□ -0.55
USHBP1-208ENST00000598309 NACAE9PAV3 2078 aa11.6□□□□□ -0.55
USHBP1-208ENST00000598309 A0A0J9YY99 117 aa11.6□□□□□ -0.55
USHBP1-208ENST00000598309 F6UZH7 168 aa11.6□□□□□ -0.55
USHBP1-208ENST00000598309 TMEM183BQ1AE95 376 aa11.6□□□□□ -0.55
USHBP1-208ENST00000598309 TMEM183AQ8IXX5 376 aa11.6□□□□□ -0.55
USHBP1-208ENST00000598309 MDFICQ9P1T7 246 aa11.6□□□□□ -0.55
USHBP1-208ENST00000598309 NAGKQ9UJ70 344 aa11.6□□□□□ -0.55
USHBP1-208ENST00000598309 LINC00588Q9Y4M8 146 aa11.6□□□□□ -0.55
USHBP1-208ENST00000598309 IGLV2-11P01706 119 aa11.59□□□□□ -0.55
USHBP1-208ENST00000598309 TMEM75Q8N9X5 138 aa11.59□□□□□ -0.55
USHBP1-208ENST00000598309 ZNRF2Q8NHG8 242 aa11.59□□□□□ -0.55
USHBP1-208ENST00000598309 VSIG2Q96IQ7 327 aa11.59□□□□□ -0.55
USHBP1-208ENST00000598309 NKX6-2Q9C056 277 aaPredicted RBP11.59□□□□□ -0.55
USHBP1-208ENST00000598309 PSG8Q9UQ74 426 aa11.59□□□□□ -0.55
USHBP1-208ENST00000598309 A0A0D9SG52 128 aa11.58□□□□□ -0.56
USHBP1-208ENST00000598309 MAP1LC3B2A6NCE7 125 aa11.58□□□□□ -0.56
USHBP1-208ENST00000598309 FLI1Q01543 452 aaPredicted RBP11.58□□□□□ -0.56
USHBP1-208ENST00000598309 RASL10AQ92737 203 aa11.58□□□□□ -0.56
USHBP1-208ENST00000598309 KCNS1Q96KK3 526 aa11.58□□□□□ -0.56
USHBP1-208ENST00000598309 SGK494Q96LW2 274 aa11.58□□□□□ -0.56
USHBP1-208ENST00000598309 MAP1LC3BQ9GZQ8 125 aa11.58□□□□□ -0.56
USHBP1-208ENST00000598309 MUC4Q99102 2169 aa11.58□□□□□ -0.56
USHBP1-208ENST00000598309 IGHV3-16A0A0C4DH30 117 aa11.57□□□□□ -0.56
USHBP1-208ENST00000598309 RTL8CO15255 209 aa11.57□□□□□ -0.56
USHBP1-208ENST00000598309 SLAQ13239 276 aa11.57□□□□□ -0.56
USHBP1-208ENST00000598309 ZFP69Q49AA0 526 aa11.57□□□□□ -0.56
USHBP1-208ENST00000598309 OR11H4Q8NGC9 324 aa11.57□□□□□ -0.56
USHBP1-208ENST00000598309 SDF2L1Q9HCN8 221 aa11.57□□□□□ -0.56
USHBP1-208ENST00000598309 FAM74A7A6NL05 159 aa11.56□□□□□ -0.56
USHBP1-208ENST00000598309 BCL2L11O43521 198 aa11.56□□□□□ -0.56
USHBP1-208ENST00000598309 TYMSP04818 313 aa11.56□□□□□ -0.56
USHBP1-208ENST00000598309 FGF8P55075 233 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms