RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 C11orf45Q8TAV5 145 aa14.59□□□□□ -0.07
PNKP-211ENST00000598020 BLOC1S1P78537 153 aa14.58□□□□□ -0.08
PNKP-211ENST00000598020 Q6AWC8 147 aa14.58□□□□□ -0.08
PNKP-211ENST00000598020 ZNF493Q6ZR52 646 aa14.58□□□□□ -0.08
PNKP-211ENST00000598020 TXNDC17Q9BRA2 123 aa14.58□□□□□ -0.08
PNKP-211ENST00000598020 NDFIP1Q9BT67 221 aa14.58□□□□□ -0.08
PNKP-211ENST00000598020 KLF12Q9Y4X4 402 aa14.58□□□□□ -0.08
PNKP-211ENST00000598020 PRM2P04554 102 aa14.57□□□□□ -0.08
PNKP-211ENST00000598020 AZU1P20160 251 aa14.57□□□□□ -0.08
PNKP-211ENST00000598020 SGK494Q96LW2 274 aa14.57□□□□□ -0.08
PNKP-211ENST00000598020 LINC00479Q96M42 142 aa14.57□□□□□ -0.08
PNKP-211ENST00000598020 TREM1Q9NP99 234 aa14.57□□□□□ -0.08
PNKP-211ENST00000598020 TEX48A0A1B0GUV7 120 aa14.56□□□□□ -0.08
PNKP-211ENST00000598020 PLAC8L1A1L4L8 177 aa14.56□□□□□ -0.08
PNKP-211ENST00000598020 SAPCD1Q5SSQ6 148 aa14.56□□□□□ -0.08
PNKP-211ENST00000598020 LYPD6BQ8NI32 183 aa14.56□□□□□ -0.08
PNKP-211ENST00000598020 RNASE8Q8TDE3 154 aaKnown RBP14.56□□□□□ -0.08
PNKP-211ENST00000598020 TMEM263Q8WUH6 116 aaKnown RBP14.56□□□□□ -0.08
PNKP-211ENST00000598020 C16orf74Q96GX8 76 aa14.56□□□□□ -0.08
PNKP-211ENST00000598020 GNG13Q9P2W3 67 aa14.56□□□□□ -0.08
PNKP-211ENST00000598020 TRAV34A0A0B4J273 112 aa14.55□□□□□ -0.08
PNKP-211ENST00000598020 TRBV6-1A0A0K0K1D8 114 aa14.55□□□□□ -0.08
PNKP-211ENST00000598020 CXorf65A6NEN9 183 aa14.55□□□□□ -0.08
PNKP-211ENST00000598020 C11orf94C9JXX5 98 aa14.55□□□□□ -0.08
PNKP-211ENST00000598020 ANXA2RQ3ZCQ2 193 aa14.55□□□□□ -0.08
PNKP-211ENST00000598020 PRNTQ86SH4 94 aa14.55□□□□□ -0.08
PNKP-211ENST00000598020 DKK2Q9UBU2 259 aa14.55□□□□□ -0.08
PNKP-211ENST00000598020 IFNA1P01562 189 aa14.54□□□□□ -0.08
PNKP-211ENST00000598020 SPART-AS1P0CW21 52 aa14.54□□□□□ -0.08
PNKP-211ENST00000598020 HTN1P15515 57 aa14.54□□□□□ -0.08
PNKP-211ENST00000598020 EMP1P54849 157 aa14.54□□□□□ -0.08
PNKP-211ENST00000598020 NANOS2P60321 138 aaKnown RBP14.54□□□□□ -0.08
PNKP-211ENST00000598020 EIF4E3Q8N5X7 224 aaKnown RBP14.54□□□□□ -0.08
PNKP-211ENST00000598020 FMC1Q96HJ9 113 aa14.54□□□□□ -0.08
PNKP-211ENST00000598020 CELA1Q9UNI1 258 aa14.54□□□□□ -0.08
PNKP-211ENST00000598020 IGHV1OR15-1A0A075B7D0 117 aa14.53□□□□□ -0.08
PNKP-211ENST00000598020 S100A9P06702 114 aaKnown RBP14.53□□□□□ -0.08
PNKP-211ENST00000598020 TAGLN2P37802 199 aaKnown RBP14.53□□□□□ -0.08
PNKP-211ENST00000598020 TMEM183BQ1AE95 376 aa14.53□□□□□ -0.08
PNKP-211ENST00000598020 CASC10Q5T4H9 136 aa14.53□□□□□ -0.08
PNKP-211ENST00000598020 Q6ZQT7 251 aa14.53□□□□□ -0.08
PNKP-211ENST00000598020 Q86TA4 180 aa14.53□□□□□ -0.08
PNKP-211ENST00000598020 C2CD4CQ8TF44 421 aa14.53□□□□□ -0.08
PNKP-211ENST00000598020 ZFP30Q9Y2G7 519 aa14.53□□□□□ -0.08
PNKP-211ENST00000598020 TRAV21A0A0B4J279 112 aa14.52□□□□□ -0.09
PNKP-211ENST00000598020 LYRM9A8MSI8 78 aa14.52□□□□□ -0.09
PNKP-211ENST00000598020 RGS13O14921 159 aa14.52□□□□□ -0.09
PNKP-211ENST00000598020 BCL2P10415 239 aa14.52□□□□□ -0.09
PNKP-211ENST00000598020 C12orf74Q32Q52 190 aa14.52□□□□□ -0.09
PNKP-211ENST00000598020 SMUG1Q53HV7 270 aa14.52□□□□□ -0.09
PNKP-211ENST00000598020 FAM222AQ5U5X8 452 aa14.52□□□□□ -0.09
PNKP-211ENST00000598020 TEX261Q6UWH6 196 aa14.52□□□□□ -0.09
PNKP-211ENST00000598020 COX8CQ7Z4L0 72 aa14.52□□□□□ -0.09
PNKP-211ENST00000598020 ZNF680Q8NEM1 530 aa14.52□□□□□ -0.09
PNKP-211ENST00000598020 C11orf52Q96A22 123 aa14.52□□□□□ -0.09
PNKP-211ENST00000598020 C8orf49Q96NF6 230 aa14.52□□□□□ -0.09
PNKP-211ENST00000598020 SCO2A0A1W2PP80 73 aa14.51□□□□□ -0.09
PNKP-211ENST00000598020 AKR1C3P42330 323 aa14.51□□□□□ -0.09
PNKP-211ENST00000598020 UBE2G1P62253 170 aa14.51□□□□□ -0.09
PNKP-211ENST00000598020 MEF2BQ02080 365 aaPredicted RBP14.51□□□□□ -0.09
PNKP-211ENST00000598020 TDRG1Q3Y452 100 aa14.51□□□□□ -0.09
PNKP-211ENST00000598020 TIMM8BQ9Y5J9 83 aaPredicted RBP14.51□□□□□ -0.09
PNKP-211ENST00000598020 LTAP01374 205 aa14.5□□□□□ -0.09
PNKP-211ENST00000598020 ZFAND6Q6FIF0 208 aa14.5□□□□□ -0.09
PNKP-211ENST00000598020 C11orf72Q8NBR9 251 aa14.5□□□□□ -0.09
PNKP-211ENST00000598020 VAX2Q9UIW0 290 aa14.5□□□□□ -0.09
PNKP-211ENST00000598020 CBY3A6NI87 242 aa14.49□□□□□ -0.09
PNKP-211ENST00000598020 GCGP01275 180 aa14.49□□□□□ -0.09
PNKP-211ENST00000598020 PFN1P07737 140 aaKnown RBP14.49□□□□□ -0.09
PNKP-211ENST00000598020 ZNF80P51504 273 aaPredicted RBP14.49□□□□□ -0.09
PNKP-211ENST00000598020 IBA57Q5T440 356 aaKnown RBP14.49□□□□□ -0.09
PNKP-211ENST00000598020 NUPR2A6NF83 97 aa14.48□□□□□ -0.09
PNKP-211ENST00000598020 PDE6DO43924 150 aa14.48□□□□□ -0.09
PNKP-211ENST00000598020 DAZ2Q13117 558 aaKnown RBP14.48□□□□□ -0.09
PNKP-211ENST00000598020 CEMP1Q6PRD7 247 aaPredicted RBP14.48□□□□□ -0.09
PNKP-211ENST00000598020 FAM159AQ6UWV7 190 aa14.48□□□□□ -0.09
PNKP-211ENST00000598020 PHLDA1Q8WV24 401 aaPredicted RBP14.48□□□□□ -0.09
PNKP-211ENST00000598020 SNURFLB1AK76 121 aa14.47□□□□□ -0.09
PNKP-211ENST00000598020 MUC21Q5SSG8 566 aa14.47□□□□□ -0.09
PNKP-211ENST00000598020 Q6ZTC4 211 aa14.47□□□□□ -0.09
PNKP-211ENST00000598020 TP53TG3Q9ULZ0 132 aa14.47□□□□□ -0.09
PNKP-211ENST00000598020 CSMD3Q7Z407 3707 aa14.47□□□□□ -0.09
PNKP-211ENST00000598020 TCL1AP56279 114 aa14.46□□□□□ -0.09
PNKP-211ENST00000598020 TMEM183AQ8IXX5 376 aa14.46□□□□□ -0.09
PNKP-211ENST00000598020 LINC00612Q8N6U2 182 aa14.46□□□□□ -0.09
PNKP-211ENST00000598020 KCNS1Q96KK3 526 aa14.46□□□□□ -0.09
PNKP-211ENST00000598020 NOP10Q9NPE3 64 aaKnown RBP14.46□□□□□ -0.09
PNKP-211ENST00000598020 GSN-AS1Q9NRJ2 163 aa14.46□□□□□ -0.09
PNKP-211ENST00000598020 TRGV11A0A075B6L2 103 aa14.45□□□□□ -0.1
PNKP-211ENST00000598020 TRAV10A0A0B4J240 114 aa14.45□□□□□ -0.1
PNKP-211ENST00000598020 FABP5P3A8MUU1 101 aa14.45□□□□□ -0.1
PNKP-211ENST00000598020 ZNF767PQ75MW2 155 aa14.45□□□□□ -0.1
PNKP-211ENST00000598020 MLST8Q9BVC4 326 aa14.45□□□□□ -0.1
PNKP-211ENST00000598020 RBFOX3A6NFN3 312 aa14.44□□□□□ -0.1
PNKP-211ENST00000598020 RPL35P42766 123 aaKnown RBP14.44□□□□□ -0.1
PNKP-211ENST00000598020 DAD1P61803 113 aa14.44□□□□□ -0.1
PNKP-211ENST00000598020 ZNF506Q5JVG8 444 aa14.44□□□□□ -0.1
PNKP-211ENST00000598020 ZC2HC1AQ96GY0 325 aa14.44□□□□□ -0.1
PNKP-211ENST00000598020 C11orf21Q9P2W6 132 aa14.44□□□□□ -0.1
PNKP-211ENST00000598020 KLK5Q9Y337 293 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms