RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 PKD1P98161 4303 aa7.34□□□□□ -1.23
CCDC9-203ENST00000596938 TRGV2A0A075B6R0 118 aa7.33□□□□□ -1.24
CCDC9-203ENST00000596938 RGS13O14921 159 aa7.33□□□□□ -1.24
CCDC9-203ENST00000596938 EIF3GO75821 320 aaKnown RBP eCLIP7.33□□□□□ -1.24
CCDC9-203ENST00000596938 Q6AWC8 147 aa7.33□□□□□ -1.24
CCDC9-203ENST00000596938 Q6ZQT7 251 aa7.33□□□□□ -1.24
CCDC9-203ENST00000596938 HSD17B11Q8NBQ5 300 aa7.33□□□□□ -1.24
CCDC9-203ENST00000596938 INO80EQ8NBZ0 244 aaPredicted RBP7.33□□□□□ -1.24
CCDC9-203ENST00000596938 ZNRF2Q8NHG8 242 aa7.33□□□□□ -1.24
CCDC9-203ENST00000596938 CMTM2Q8TAZ6 248 aa7.33□□□□□ -1.24
CCDC9-203ENST00000596938 SUN5Q8TC36 379 aa7.33□□□□□ -1.24
CCDC9-203ENST00000596938 HYLS1Q96M11 299 aa7.33□□□□□ -1.24
CCDC9-203ENST00000596938 TP53TG3Q9ULZ0 132 aa7.33□□□□□ -1.24
CCDC9-203ENST00000596938 KLF12Q9Y4X4 402 aa7.33□□□□□ -1.24
CCDC9-203ENST00000596938 HERC2O95714 4834 aa7.32□□□□□ -1.24
CCDC9-203ENST00000596938 PKHD1P08F94 4074 aa7.32□□□□□ -1.24
CCDC9-203ENST00000596938 TRGV1A0A0A0MS02 117 aa7.32□□□□□ -1.24
CCDC9-203ENST00000596938 A0A1B0GVY2 172 aa7.32□□□□□ -1.24
CCDC9-203ENST00000596938 PRSS29PA6NIE9 313 aa7.32□□□□□ -1.24
CCDC9-203ENST00000596938 STAG3L2P0CL84 134 aa7.32□□□□□ -1.24
CCDC9-203ENST00000596938 STAG3L3P0CL85 134 aa7.32□□□□□ -1.24
CCDC9-203ENST00000596938 ATP6V0CP27449 155 aa7.32□□□□□ -1.24
CCDC9-203ENST00000596938 RGS21Q2M5E4 152 aa7.32□□□□□ -1.24
CCDC9-203ENST00000596938 SOHLH1Q5JUK2 328 aa7.32□□□□□ -1.24
CCDC9-203ENST00000596938 RAB24Q969Q5 203 aa7.32□□□□□ -1.24
CCDC9-203ENST00000596938 TMPRSS5Q9H3S3 457 aa7.32□□□□□ -1.24
CCDC9-203ENST00000596938 TNFSF18Q9UNG2 199 aa7.32□□□□□ -1.24
CCDC9-203ENST00000596938 LINC00588Q9Y4M8 146 aa7.32□□□□□ -1.24
CCDC9-203ENST00000596938 DYNC1H1Q14204 4646 aaKnown RBP7.32□□□□□ -1.24
CCDC9-203ENST00000596938 A0A0J9YY99 117 aa7.31□□□□□ -1.24
CCDC9-203ENST00000596938 RNF222A6NCQ9 220 aa7.31□□□□□ -1.24
CCDC9-203ENST00000596938 HMGB3O15347 200 aaKnown RBP7.31□□□□□ -1.24
CCDC9-203ENST00000596938 ARL14EPLP0DKL9 152 aa7.31□□□□□ -1.24
CCDC9-203ENST00000596938 CDC34P49427 236 aaPredicted RBP7.31□□□□□ -1.24
CCDC9-203ENST00000596938 TDRG1Q3Y452 100 aa7.31□□□□□ -1.24
CCDC9-203ENST00000596938 C1orf134Q5TEV5 83 aa7.31□□□□□ -1.24
CCDC9-203ENST00000596938 SSX7Q7RTT5 188 aa7.31□□□□□ -1.24
CCDC9-203ENST00000596938 VSIG2Q96IQ7 327 aa7.31□□□□□ -1.24
CCDC9-203ENST00000596938 ST6GAL2Q96JF0 529 aa7.31□□□□□ -1.24
CCDC9-203ENST00000596938 ARPC5LQ9BPX5 153 aa7.31□□□□□ -1.24
CCDC9-203ENST00000596938 DNAH11Q96DT5 4516 aa7.3□□□□□ -1.24
CCDC9-203ENST00000596938 BORCS7-ASMTA0A0B4J1R7 106 aa7.3□□□□□ -1.24
CCDC9-203ENST00000596938 NBDYA0A0U1RRE5 68 aa7.3□□□□□ -1.24
CCDC9-203ENST00000596938 SERTM2A0A1B0GWG4 89 aa7.3□□□□□ -1.24
CCDC9-203ENST00000596938 GCHFRP30047 84 aa7.3□□□□□ -1.24
CCDC9-203ENST00000596938 ZNF415Q09FC8 603 aa7.3□□□□□ -1.24
CCDC9-203ENST00000596938 SLAQ13239 276 aa7.3□□□□□ -1.24
CCDC9-203ENST00000596938 ESRGQ1W209 222 aa7.3□□□□□ -1.24
CCDC9-203ENST00000596938 RPL7L1Q6DKI1 246 aaKnown RBP7.3□□□□□ -1.24
CCDC9-203ENST00000596938 FAM159AQ6UWV7 190 aa7.3□□□□□ -1.24
CCDC9-203ENST00000596938 GOLT1AQ6ZVE7 132 aa7.3□□□□□ -1.24
CCDC9-203ENST00000596938 OR2T35Q8NGX2 323 aa7.3□□□□□ -1.24
CCDC9-203ENST00000596938 ACTR3CQ9C0K3 210 aaPredicted RBP7.3□□□□□ -1.24
CCDC9-203ENST00000596938 Q9H8V8 135 aa7.3□□□□□ -1.24
CCDC9-203ENST00000596938 MDFICQ9P1T7 246 aa7.3□□□□□ -1.24
CCDC9-203ENST00000596938 KIAA1109Q2LD37 5005 aa7.29□□□□□ -1.24
CCDC9-203ENST00000596938 TRGV11A0A075B6L2 103 aa7.29□□□□□ -1.24
CCDC9-203ENST00000596938 FXYD6-FXYD2A0A087WZ82 144 aa7.29□□□□□ -1.24
CCDC9-203ENST00000596938 TRAV21A0A0B4J279 112 aa7.29□□□□□ -1.24
CCDC9-203ENST00000596938 CXorf1O96002 111 aa7.29□□□□□ -1.24
CCDC9-203ENST00000596938 MUC21Q5SSG8 566 aa7.29□□□□□ -1.24
CCDC9-203ENST00000596938 IQCF2Q8IXL9 164 aa7.29□□□□□ -1.24
CCDC9-203ENST00000596938 C5orf17Q8NAS9 161 aa7.29□□□□□ -1.24
CCDC9-203ENST00000596938 RASL10AQ92737 203 aa7.29□□□□□ -1.24
CCDC9-203ENST00000596938 TVP23CQ96ET8 276 aa7.29□□□□□ -1.24
CCDC9-203ENST00000596938 SPXQ9BT56 116 aa7.29□□□□□ -1.24
CCDC9-203ENST00000596938 UPK3BQ9BT76 320 aa7.29□□□□□ -1.24
CCDC9-203ENST00000596938 SH3BGRL3Q9H299 93 aa7.29□□□□□ -1.24
CCDC9-203ENST00000596938 TREM1Q9NP99 234 aa7.29□□□□□ -1.24
CCDC9-203ENST00000596938 TMEM167BQ9NRX6 74 aa7.29□□□□□ -1.24
CCDC9-203ENST00000596938 PRO0255Q9UI72 69 aa7.29□□□□□ -1.24
CCDC9-203ENST00000596938 A0A096LPF7 62 aa7.28□□□□□ -1.24
CCDC9-203ENST00000596938 TRAV8-1A0A0A6YYK1 113 aa7.28□□□□□ -1.24
CCDC9-203ENST00000596938 K7EQM0 130 aa7.28□□□□□ -1.24
CCDC9-203ENST00000596938 TAAR5O14804 337 aa7.28□□□□□ -1.24
CCDC9-203ENST00000596938 PAX4O43316 350 aa7.28□□□□□ -1.24
CCDC9-203ENST00000596938 TCRAP04437 139 aa7.28□□□□□ -1.24
CCDC9-203ENST00000596938 SUMO1P63165 101 aaKnown RBP7.28□□□□□ -1.24
CCDC9-203ENST00000596938 GNG5P63218 68 aa7.28□□□□□ -1.24
CCDC9-203ENST00000596938 FHL2Q14192 279 aa7.28□□□□□ -1.24
CCDC9-203ENST00000596938 MRPL16Q9NX20 251 aaKnown RBP7.28□□□□□ -1.24
CCDC9-203ENST00000596938 EPDR1Q9UM22 224 aa7.28□□□□□ -1.24
CCDC9-203ENST00000596938 RPH3ALQ9UNE2 315 aa7.28□□□□□ -1.24
CCDC9-203ENST00000596938 HHLA3Q9XRX5 114 aa7.28□□□□□ -1.24
CCDC9-203ENST00000596938 FBLL1A6NHQ2 334 aaKnown RBP7.27□□□□□ -1.25
CCDC9-203ENST00000596938 G3V3Q6 166 aa7.27□□□□□ -1.25
CCDC9-203ENST00000596938 GNRH2O43555 120 aa7.27□□□□□ -1.25
CCDC9-203ENST00000596938 TMEM183BQ1AE95 376 aa7.27□□□□□ -1.25
CCDC9-203ENST00000596938 TMEM183AQ8IXX5 376 aa7.27□□□□□ -1.25
CCDC9-203ENST00000596938 KCNS1Q96KK3 526 aa7.27□□□□□ -1.25
CCDC9-203ENST00000596938 NDFIP1Q9BT67 221 aa7.27□□□□□ -1.25
CCDC9-203ENST00000596938 MRPS16Q9Y3D3 137 aaKnown RBP7.27□□□□□ -1.25
CCDC9-203ENST00000596938 IGHV3-16A0A0C4DH30 117 aa7.26□□□□□ -1.25
CCDC9-203ENST00000596938 A0A1W2PRE2 83 aa7.26□□□□□ -1.25
CCDC9-203ENST00000596938 GGTLC3B5MD39 225 aa7.26□□□□□ -1.25
CCDC9-203ENST00000596938 IGLV2-11P01706 119 aa7.26□□□□□ -1.25
CCDC9-203ENST00000596938 IGHV3-53P01767 116 aa7.26□□□□□ -1.25
CCDC9-203ENST00000596938 BTF3P20290 206 aaKnown RBP7.26□□□□□ -1.25
CCDC9-203ENST00000596938 CRYBA4P53673 196 aa7.26□□□□□ -1.25
CCDC9-203ENST00000596938 ZNF726P1Q15940 193 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms