RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 A0A0D9SG52 128 aa14.85□□□□□ -0.03
PNKP-209ENST00000596726 ATP5G1P05496 136 aa14.85□□□□□ -0.03
PNKP-209ENST00000596726 ATP5G3P48201 142 aa14.85□□□□□ -0.03
PNKP-209ENST00000596726 Q6AWC8 147 aa14.85□□□□□ -0.03
PNKP-209ENST00000596726 TMEM88Q6PEY1 159 aa14.85□□□□□ -0.03
PNKP-209ENST00000596726 C5orf17Q8NAS9 161 aa14.85□□□□□ -0.03
PNKP-209ENST00000596726 GSN-AS1Q9NRJ2 163 aa14.85□□□□□ -0.03
PNKP-209ENST00000596726 IBA57Q5T440 356 aaKnown RBP14.84□□□□□ -0.03
PNKP-209ENST00000596726 TVP23CQ96ET8 276 aa14.84□□□□□ -0.03
PNKP-209ENST00000596726 TRAV8-1A0A0A6YYK1 113 aa14.83□□□□□ -0.04
PNKP-209ENST00000596726 SERTM2A0A1B0GWG4 89 aa14.83□□□□□ -0.04
PNKP-209ENST00000596726 A0A1W2PRE2 83 aa14.83□□□□□ -0.04
PNKP-209ENST00000596726 GGTLC3B5MD39 225 aa14.83□□□□□ -0.04
PNKP-209ENST00000596726 RGS13O14921 159 aa14.83□□□□□ -0.04
PNKP-209ENST00000596726 TCRAP04437 139 aa14.83□□□□□ -0.04
PNKP-209ENST00000596726 P0DMU3 169 aa14.83□□□□□ -0.04
PNKP-209ENST00000596726 FAM231AP0DMU4 169 aa14.83□□□□□ -0.04
PNKP-209ENST00000596726 FAM231CP0DMU5 169 aa14.83□□□□□ -0.04
PNKP-209ENST00000596726 SUMO1P63165 101 aaKnown RBP14.83□□□□□ -0.04
PNKP-209ENST00000596726 Q6ZNX1 250 aa14.83□□□□□ -0.04
PNKP-209ENST00000596726 TP53TG3Q9ULZ0 132 aa14.83□□□□□ -0.04
PNKP-209ENST00000596726 GAGE12BA1L429 117 aa14.82□□□□□ -0.04
PNKP-209ENST00000596726 F5H768 121 aa14.82□□□□□ -0.04
PNKP-209ENST00000596726 GAGE7O76087 117 aa14.82□□□□□ -0.04
PNKP-209ENST00000596726 GAGE12FP0CL80 117 aa14.82□□□□□ -0.04
PNKP-209ENST00000596726 GAGE12GP0CL81 117 aa14.82□□□□□ -0.04
PNKP-209ENST00000596726 GAGE12IP0CL82 117 aa14.82□□□□□ -0.04
PNKP-209ENST00000596726 TCL1AP56279 114 aa14.82□□□□□ -0.04
PNKP-209ENST00000596726 TMPRSS5Q9H3S3 457 aa14.82□□□□□ -0.04
PNKP-209ENST00000596726 EPDR1Q9UM22 224 aa14.82□□□□□ -0.04
PNKP-209ENST00000596726 BCL2L11O43521 198 aa14.81□□□□□ -0.04
PNKP-209ENST00000596726 SEC11BP0C7V7 166 aa14.81□□□□□ -0.04
PNKP-209ENST00000596726 Q6ZTI0 123 aa14.81□□□□□ -0.04
PNKP-209ENST00000596726 IQCF2Q8IXL9 164 aa14.81□□□□□ -0.04
PNKP-209ENST00000596726 KLF12Q9Y4X4 402 aa14.81□□□□□ -0.04
PNKP-209ENST00000596726 KANTRA0A1W2PQU2 76 aa14.8□□□□□ -0.04
PNKP-209ENST00000596726 FGF8P55075 233 aaPredicted RBP14.8□□□□□ -0.04
PNKP-209ENST00000596726 POM121L12Q8N7R1 296 aa14.8□□□□□ -0.04
PNKP-209ENST00000596726 C15orf53Q8NAA6 179 aa14.8□□□□□ -0.04
PNKP-209ENST00000596726 C18orf15Q96N68 181 aa14.8□□□□□ -0.04
PNKP-209ENST00000596726 MAP1LC3B2A6NCE7 125 aa14.79□□□□□ -0.04
PNKP-209ENST00000596726 SPINK4O60575 86 aa14.79□□□□□ -0.04
PNKP-209ENST00000596726 IGLV2-11P01706 119 aa14.79□□□□□ -0.04
PNKP-209ENST00000596726 MUC21Q5SSG8 566 aa14.79□□□□□ -0.04
PNKP-209ENST00000596726 TMUB2Q71RG4 321 aa14.79□□□□□ -0.04
PNKP-209ENST00000596726 SGK494Q96LW2 274 aa14.79□□□□□ -0.04
PNKP-209ENST00000596726 ZNF471Q9BX82 626 aaPredicted RBP14.79□□□□□ -0.04
PNKP-209ENST00000596726 MAP1LC3BQ9GZQ8 125 aa14.79□□□□□ -0.04
PNKP-209ENST00000596726 TREM1Q9NP99 234 aa14.79□□□□□ -0.04
PNKP-209ENST00000596726 DNAH10Q8IVF4 4471 aa14.78□□□□□ -0.04
PNKP-209ENST00000596726 K7EQM0 130 aa14.78□□□□□ -0.04
PNKP-209ENST00000596726 TDRG1Q3Y452 100 aa14.78□□□□□ -0.04
PNKP-209ENST00000596726 TCTE3Q8IZS6 198 aa14.78□□□□□ -0.04
PNKP-209ENST00000596726 CYB561D1Q8N8Q1 229 aa14.78□□□□□ -0.04
PNKP-209ENST00000596726 PSG8Q9UQ74 426 aa14.78□□□□□ -0.04
PNKP-209ENST00000596726 MUC4Q99102 2169 aa14.77□□□□□ -0.04
PNKP-209ENST00000596726 FAM74A7A6NL05 159 aa14.77□□□□□ -0.05
PNKP-209ENST00000596726 FHITP49789 147 aa14.77□□□□□ -0.05
PNKP-209ENST00000596726 ATG101Q9BSB4 218 aa14.77□□□□□ -0.05
PNKP-209ENST00000596726 NACAE9PAV3 2078 aa14.77□□□□□ -0.05
PNKP-209ENST00000596726 EPPK1P58107 5090 aaKnown RBP14.76□□□□□ -0.05
PNKP-209ENST00000596726 TRGV1A0A0A0MS02 117 aa14.76□□□□□ -0.05
PNKP-209ENST00000596726 TRAV21A0A0B4J279 112 aa14.76□□□□□ -0.05
PNKP-209ENST00000596726 UMAD1C9J7I0 102 aa14.76□□□□□ -0.05
PNKP-209ENST00000596726 F6UZH7 168 aa14.76□□□□□ -0.05
PNKP-209ENST00000596726 HOXA5P20719 270 aa14.76□□□□□ -0.05
PNKP-209ENST00000596726 UBE2G2P60604 165 aa14.76□□□□□ -0.05
PNKP-209ENST00000596726 FLI1Q01543 452 aaPredicted RBP14.76□□□□□ -0.05
PNKP-209ENST00000596726 ZNF415Q09FC8 603 aa14.76□□□□□ -0.05
PNKP-209ENST00000596726 LGALS9BQ3B8N2 356 aa14.76□□□□□ -0.05
PNKP-209ENST00000596726 RNF212Q495C1 297 aa14.76□□□□□ -0.05
PNKP-209ENST00000596726 FAM159AQ6UWV7 190 aa14.76□□□□□ -0.05
PNKP-209ENST00000596726 TMEM75Q8N9X5 138 aa14.76□□□□□ -0.05
PNKP-209ENST00000596726 NKX6-2Q9C056 277 aaPredicted RBP14.76□□□□□ -0.05
PNKP-209ENST00000596726 FBLL1A6NHQ2 334 aaKnown RBP14.75□□□□□ -0.05
PNKP-209ENST00000596726 EIF5AP63241 154 aaKnown RBP14.75□□□□□ -0.05
PNKP-209ENST00000596726 MBD3L1Q8WWY6 194 aa14.75□□□□□ -0.05
PNKP-209ENST00000596726 NDFIP1Q9BT67 221 aa14.75□□□□□ -0.05
PNKP-209ENST00000596726 MDFICQ9P1T7 246 aa14.75□□□□□ -0.05
PNKP-209ENST00000596726 TRGV11A0A075B6L2 103 aa14.74□□□□□ -0.05
PNKP-209ENST00000596726 PFDN1O60925 122 aa14.74□□□□□ -0.05
PNKP-209ENST00000596726 LGALSLQ3ZCW2 172 aaPredicted RBP14.74□□□□□ -0.05
PNKP-209ENST00000596726 STOML3Q8TAV4 291 aa14.74□□□□□ -0.05
PNKP-209ENST00000596726 C8orf49Q96NF6 230 aa14.74□□□□□ -0.05
PNKP-209ENST00000596726 TRGV2A0A075B6R0 118 aa14.73□□□□□ -0.05
PNKP-209ENST00000596726 IFNA7P01567 189 aa14.73□□□□□ -0.05
PNKP-209ENST00000596726 ZNF80P51504 273 aaPredicted RBP14.73□□□□□ -0.05
PNKP-209ENST00000596726 OR5I1Q13606 314 aa14.73□□□□□ -0.05
PNKP-209ENST00000596726 TMEM183BQ1AE95 376 aa14.73□□□□□ -0.05
PNKP-209ENST00000596726 PRNTQ86SH4 94 aa14.73□□□□□ -0.05
PNKP-209ENST00000596726 TMEM183AQ8IXX5 376 aa14.73□□□□□ -0.05
PNKP-209ENST00000596726 LINC00479Q96M42 142 aa14.73□□□□□ -0.05
PNKP-209ENST00000596726 TRAV26-1A0A087WT03 109 aa14.72□□□□□ -0.05
PNKP-209ENST00000596726 PEX7O00628 323 aa14.72□□□□□ -0.05
PNKP-209ENST00000596726 NUDT3O95989 172 aa14.72□□□□□ -0.05
PNKP-209ENST00000596726 C1QBP02746 253 aa14.72□□□□□ -0.05
PNKP-209ENST00000596726 TPT1P13693 172 aaKnown RBP14.72□□□□□ -0.05
PNKP-209ENST00000596726 DPPA3Q6W0C5 159 aa14.72□□□□□ -0.05
PNKP-209ENST00000596726 UBE2DNLQ8IWF7 75 aa14.72□□□□□ -0.05
PNKP-209ENST00000596726 FAM213BQ8TBF2 198 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms