RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 GAGE12IP0CL82 117 aa11.08□□□□□ -0.64
ZNF550-207ENST00000595560 GCHFRP30047 84 aa11.08□□□□□ -0.64
ZNF550-207ENST00000595560 Q6ZQT7 251 aa11.08□□□□□ -0.64
ZNF550-207ENST00000595560 GOLT1AQ6ZVE7 132 aa11.08□□□□□ -0.64
ZNF550-207ENST00000595560 UBE2DNLQ8IWF7 75 aa11.08□□□□□ -0.64
ZNF550-207ENST00000595560 ST6GAL2Q96JF0 529 aa11.08□□□□□ -0.64
ZNF550-207ENST00000595560 ACTR3CQ9C0K3 210 aaPredicted RBP11.08□□□□□ -0.64
ZNF550-207ENST00000595560 RPH3ALQ9UNE2 315 aa11.08□□□□□ -0.64
ZNF550-207ENST00000595560 BIRC6Q9NR09 4857 aa11.07□□□□□ -0.64
ZNF550-207ENST00000595560 CXorf1O96002 111 aa11.07□□□□□ -0.64
ZNF550-207ENST00000595560 TCL1AP56279 114 aa11.07□□□□□ -0.64
ZNF550-207ENST00000595560 Q6AWC8 147 aa11.07□□□□□ -0.64
ZNF550-207ENST00000595560 Q6ZTI0 123 aa11.07□□□□□ -0.64
ZNF550-207ENST00000595560 C18orf15Q96N68 181 aa11.07□□□□□ -0.64
ZNF550-207ENST00000595560 SERTM2A0A1B0GWG4 89 aa11.06□□□□□ -0.64
ZNF550-207ENST00000595560 SSX7Q7RTT5 188 aa11.06□□□□□ -0.64
ZNF550-207ENST00000595560 C5orf17Q8NAS9 161 aa11.06□□□□□ -0.64
ZNF550-207ENST00000595560 TMEM167BQ9NRX6 74 aa11.06□□□□□ -0.64
ZNF550-207ENST00000595560 TP53TG3Q9ULZ0 132 aa11.06□□□□□ -0.64
ZNF550-207ENST00000595560 SPINK4O60575 86 aa11.05□□□□□ -0.64
ZNF550-207ENST00000595560 FAM3BP58499 235 aaPredicted RBP11.05□□□□□ -0.64
ZNF550-207ENST00000595560 GNG5P63218 68 aa11.05□□□□□ -0.64
ZNF550-207ENST00000595560 MUC4Q99102 2169 aa11.05□□□□□ -0.64
ZNF550-207ENST00000595560 ARPC5LQ9BPX5 153 aa11.05□□□□□ -0.64
ZNF550-207ENST00000595560 TMPRSS5Q9H3S3 457 aa11.05□□□□□ -0.64
ZNF550-207ENST00000595560 KLF12Q9Y4X4 402 aa11.05□□□□□ -0.64
ZNF550-207ENST00000595560 TRGV2A0A075B6R0 118 aa11.04□□□□□ -0.64
ZNF550-207ENST00000595560 TRGV1A0A0A0MS02 117 aa11.04□□□□□ -0.64
ZNF550-207ENST00000595560 TRAV8-1A0A0A6YYK1 113 aa11.04□□□□□ -0.64
ZNF550-207ENST00000595560 CTXND1A0A1B0GTU2 59 aa11.04□□□□□ -0.64
ZNF550-207ENST00000595560 GGTLC3B5MD39 225 aa11.04□□□□□ -0.64
ZNF550-207ENST00000595560 SMLR1H3BR10 107 aa11.04□□□□□ -0.64
ZNF550-207ENST00000595560 NUDT3O95989 172 aa11.04□□□□□ -0.64
ZNF550-207ENST00000595560 TCRAP04437 139 aa11.04□□□□□ -0.64
ZNF550-207ENST00000595560 HOXA5P20719 270 aa11.04□□□□□ -0.64
ZNF550-207ENST00000595560 ZNF415Q09FC8 603 aa11.04□□□□□ -0.64
ZNF550-207ENST00000595560 OR5I1Q13606 314 aa11.04□□□□□ -0.64
ZNF550-207ENST00000595560 ZNF345Q14585 488 aa11.04□□□□□ -0.64
ZNF550-207ENST00000595560 ZNF726P1Q15940 193 aa11.04□□□□□ -0.64
ZNF550-207ENST00000595560 CYTL1Q9NRR1 136 aa11.04□□□□□ -0.64
ZNF550-207ENST00000595560 TRAV26-1A0A087WT03 109 aa11.03□□□□□ -0.64
ZNF550-207ENST00000595560 LGALS9BQ3B8N2 356 aa11.03□□□□□ -0.64
ZNF550-207ENST00000595560 MUC21Q5SSG8 566 aa11.03□□□□□ -0.64
ZNF550-207ENST00000595560 AKR1C8PQ5T2L2 129 aa11.03□□□□□ -0.64
ZNF550-207ENST00000595560 TVP23CQ96ET8 276 aa11.03□□□□□ -0.64
ZNF550-207ENST00000595560 ATG101Q9BSB4 218 aa11.03□□□□□ -0.64
ZNF550-207ENST00000595560 TREM1Q9NP99 234 aa11.03□□□□□ -0.64
ZNF550-207ENST00000595560 DNAH10Q8IVF4 4471 aa11.02□□□□□ -0.64
ZNF550-207ENST00000595560 A0A1W2PRE2 83 aa11.02□□□□□ -0.65
ZNF550-207ENST00000595560 HMSDA8MTL9 139 aa11.02□□□□□ -0.65
ZNF550-207ENST00000595560 H3BNG1 76 aa11.02□□□□□ -0.65
ZNF550-207ENST00000595560 K7EQM0 130 aa11.02□□□□□ -0.65
ZNF550-207ENST00000595560 SUMO1P63165 101 aaKnown RBP11.02□□□□□ -0.65
ZNF550-207ENST00000595560 TDRG1Q3Y452 100 aa11.02□□□□□ -0.65
ZNF550-207ENST00000595560 FAM159AQ6UWV7 190 aa11.02□□□□□ -0.65
ZNF550-207ENST00000595560 KCNRGQ8N5I3 272 aa11.02□□□□□ -0.65
ZNF550-207ENST00000595560 TRGV11A0A075B6L2 103 aa11.01□□□□□ -0.65
ZNF550-207ENST00000595560 F6UZH7 168 aa11.01□□□□□ -0.65
ZNF550-207ENST00000595560 Q6ZR54 194 aa11.01□□□□□ -0.65
ZNF550-207ENST00000595560 IQCF2Q8IXL9 164 aa11.01□□□□□ -0.65
ZNF550-207ENST00000595560 NDFIP1Q9BT67 221 aa11.01□□□□□ -0.65
ZNF550-207ENST00000595560 MRPL16Q9NX20 251 aaKnown RBP11.01□□□□□ -0.65
ZNF550-207ENST00000595560 EPDR1Q9UM22 224 aa11.01□□□□□ -0.65
ZNF550-207ENST00000595560 TRAV21A0A0B4J279 112 aa11□□□□□ -0.65
ZNF550-207ENST00000595560 IGLV2-11P01706 119 aa11□□□□□ -0.65
ZNF550-207ENST00000595560 CCL18P55774 89 aa11□□□□□ -0.65
ZNF550-207ENST00000595560 TMEM183BQ1AE95 376 aa11□□□□□ -0.65
ZNF550-207ENST00000595560 TMEM183AQ8IXX5 376 aa11□□□□□ -0.65
ZNF550-207ENST00000595560 CYB561D1Q8N8Q1 229 aa11□□□□□ -0.65
ZNF550-207ENST00000595560 TMEM75Q8N9X5 138 aa11□□□□□ -0.65
ZNF550-207ENST00000595560 OR11H4Q8NGC9 324 aa11□□□□□ -0.65
ZNF550-207ENST00000595560 MDFICQ9P1T7 246 aa11□□□□□ -0.65
ZNF550-207ENST00000595560 IGLV2-18A0A075B6J9 118 aa10.99□□□□□ -0.65
ZNF550-207ENST00000595560 A0A0J9YY99 117 aa10.99□□□□□ -0.65
ZNF550-207ENST00000595560 FBLL1A6NHQ2 334 aaKnown RBP10.99□□□□□ -0.65
ZNF550-207ENST00000595560 M0R2N4 97 aa10.99□□□□□ -0.65
ZNF550-207ENST00000595560 LINC00336Q6ZUF6 198 aa10.99□□□□□ -0.65
ZNF550-207ENST00000595560 SGK494Q96LW2 274 aa10.99□□□□□ -0.65
ZNF550-207ENST00000595560 SPXQ9BT56 116 aa10.99□□□□□ -0.65
ZNF550-207ENST00000595560 NAGKQ9UJ70 344 aa10.99□□□□□ -0.65
ZNF550-207ENST00000595560 A0A0D9SG52 128 aa10.98□□□□□ -0.65
ZNF550-207ENST00000595560 MAP1LC3B2A6NCE7 125 aa10.98□□□□□ -0.65
ZNF550-207ENST00000595560 FGF8P55075 233 aaPredicted RBP10.98□□□□□ -0.65
ZNF550-207ENST00000595560 FLI1Q01543 452 aaPredicted RBP10.98□□□□□ -0.65
ZNF550-207ENST00000595560 ZNRF2Q8NHG8 242 aa10.98□□□□□ -0.65
ZNF550-207ENST00000595560 NKX6-2Q9C056 277 aaPredicted RBP10.98□□□□□ -0.65
ZNF550-207ENST00000595560 MAP1LC3BQ9GZQ8 125 aa10.98□□□□□ -0.65
ZNF550-207ENST00000595560 PSG8Q9UQ74 426 aa10.98□□□□□ -0.65
ZNF550-207ENST00000595560 LINC00588Q9Y4M8 146 aa10.98□□□□□ -0.65
ZNF550-207ENST00000595560 HECTD4Q9Y4D8 3996 aa10.98□□□□□ -0.65
ZNF550-207ENST00000595560 FAM74A7A6NL05 159 aa10.97□□□□□ -0.65
ZNF550-207ENST00000595560 SEC11BP0C7V7 166 aa10.97□□□□□ -0.65
ZNF550-207ENST00000595560 RASL10AQ92737 203 aa10.97□□□□□ -0.65
ZNF550-207ENST00000595560 VSIG2Q96IQ7 327 aa10.97□□□□□ -0.65
ZNF550-207ENST00000595560 KCNS1Q96KK3 526 aa10.97□□□□□ -0.65
ZNF550-207ENST00000595560 C8orf49Q96NF6 230 aa10.97□□□□□ -0.65
ZNF550-207ENST00000595560 SDF2L1Q9HCN8 221 aa10.97□□□□□ -0.65
ZNF550-207ENST00000595560 IGHV3-16A0A0C4DH30 117 aa10.96□□□□□ -0.65
ZNF550-207ENST00000595560 KANTRA0A1W2PQU2 76 aa10.96□□□□□ -0.65
ZNF550-207ENST00000595560 BCL2L11O43521 198 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms