RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 MRPL35Q9NZE8 188 aaKnown RBP10.17□□□□□ -0.78
VRK3-209ENST00000594948 CEP250Q9BV73 2442 aa10.17□□□□□ -0.78
VRK3-209ENST00000594948 APC2O95996 2303 aa10.17□□□□□ -0.78
VRK3-209ENST00000594948 TRBV7-1A0A0A6YYK4 115 aa10.17□□□□□ -0.78
VRK3-209ENST00000594948 TRGV3P03979 118 aa10.17□□□□□ -0.78
VRK3-209ENST00000594948 CLEC3BP05452 202 aa10.17□□□□□ -0.78
VRK3-209ENST00000594948 SLC25A16P16260 332 aa10.17□□□□□ -0.78
VRK3-209ENST00000594948 PPIFP30405 207 aaKnown RBP10.17□□□□□ -0.78
VRK3-209ENST00000594948 RNF182Q8N6D2 247 aa10.17□□□□□ -0.78
VRK3-209ENST00000594948 METTL26Q96S19 204 aa10.17□□□□□ -0.78
VRK3-209ENST00000594948 LY6HO94772 140 aa10.16□□□□□ -0.78
VRK3-209ENST00000594948 TM4SF20Q53R12 229 aa10.16□□□□□ -0.78
VRK3-209ENST00000594948 TMEM160Q9NX00 188 aa10.16□□□□□ -0.78
VRK3-209ENST00000594948 EP300Q09472 2414 aaPredicted RBP10.15□□□□□ -0.78
VRK3-209ENST00000594948 TRAV40A0A0B4J280 105 aa10.15□□□□□ -0.78
VRK3-209ENST00000594948 K7ENP7 123 aa10.15□□□□□ -0.78
VRK3-209ENST00000594948 GRNP28799 593 aaKnown RBP10.15□□□□□ -0.78
VRK3-209ENST00000594948 RIPPLY3P57055 190 aa10.15□□□□□ -0.78
VRK3-209ENST00000594948 C8orf86Q6ZUL3 223 aa10.15□□□□□ -0.78
VRK3-209ENST00000594948 CCDC140Q96MF4 163 aa10.15□□□□□ -0.78
VRK3-209ENST00000594948 IGLL5B9A064 214 aa10.14□□□□□ -0.79
VRK3-209ENST00000594948 TMEM238C9JI98 176 aa10.14□□□□□ -0.79
VRK3-209ENST00000594948 F8VRH5 84 aa10.14□□□□□ -0.79
VRK3-209ENST00000594948 F8W1H4 67 aa10.14□□□□□ -0.79
VRK3-209ENST00000594948 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.14□□□□□ -0.79
VRK3-209ENST00000594948 H7C1H1 209 aa10.14□□□□□ -0.79
VRK3-209ENST00000594948 ATP6V0E1O15342 81 aa10.14□□□□□ -0.79
VRK3-209ENST00000594948 ZNF207O43670 478 aaKnown RBP10.14□□□□□ -0.79
VRK3-209ENST00000594948 UBE2E1P51965 193 aa10.14□□□□□ -0.79
VRK3-209ENST00000594948 ORMDL2Q53FV1 153 aa10.14□□□□□ -0.79
VRK3-209ENST00000594948 SMIM2Q9BVW6 85 aa10.14□□□□□ -0.79
VRK3-209ENST00000594948 TTTY13Q9BZ97 58 aa10.14□□□□□ -0.79
VRK3-209ENST00000594948 NHP2Q9NX24 153 aaKnown RBP10.14□□□□□ -0.79
VRK3-209ENST00000594948 IGHV3OR16-8A0A075B7F1 116 aa10.14□□□□□ -0.79
VRK3-209ENST00000594948 CENPVL3A0A0U1RRI6 287 aa10.14□□□□□ -0.79
VRK3-209ENST00000594948 ECSCRQ19T08 205 aa10.14□□□□□ -0.79
VRK3-209ENST00000594948 SPANXN1Q5VSR9 72 aa10.14□□□□□ -0.79
VRK3-209ENST00000594948 FOXI2Q6ZQN5 318 aa10.14□□□□□ -0.79
VRK3-209ENST00000594948 C9orf139Q6ZV77 190 aa10.14□□□□□ -0.79
VRK3-209ENST00000594948 C20orf78Q9BR46 151 aa10.14□□□□□ -0.79
VRK3-209ENST00000594948 IGHV3-35A0A0C4DH35 117 aa10.13□□□□□ -0.79
VRK3-209ENST00000594948 A0A1B0GWB2 263 aa10.13□□□□□ -0.79
VRK3-209ENST00000594948 MED14OSP0DP75 135 aa10.13□□□□□ -0.79
VRK3-209ENST00000594948 SCGB1A1P11684 91 aa10.13□□□□□ -0.79
VRK3-209ENST00000594948 TCF15Q12870 199 aa10.13□□□□□ -0.79
VRK3-209ENST00000594948 CLEC19AQ6UXS0 136 aa10.13□□□□□ -0.79
VRK3-209ENST00000594948 MAPKAPK5-AS1Q8N8E1 139 aa10.13□□□□□ -0.79
VRK3-209ENST00000594948 AJUBAQ96IF1 538 aa10.13□□□□□ -0.79
VRK3-209ENST00000594948 UFC1Q9Y3C8 167 aa10.13□□□□□ -0.79
VRK3-209ENST00000594948 TRBV7-3A0A075B6L6 115 aa10.12□□□□□ -0.79
VRK3-209ENST00000594948 K7ERJ3 54 aa10.12□□□□□ -0.79
VRK3-209ENST00000594948 M0R381 172 aa10.12□□□□□ -0.79
VRK3-209ENST00000594948 ZFP36P26651 326 aaKnown RBP10.12□□□□□ -0.79
VRK3-209ENST00000594948 C12orf74Q32Q52 190 aa10.12□□□□□ -0.79
VRK3-209ENST00000594948 LINC00477Q96M19 166 aa10.12□□□□□ -0.79
VRK3-209ENST00000594948 ITLN2Q8WWU7 325 aaPredicted RBP10.12□□□□□ -0.79
VRK3-209ENST00000594948 TOMM6Q96B49 74 aa10.12□□□□□ -0.79
VRK3-209ENST00000594948 ZNF479Q96JC4 524 aa10.12□□□□□ -0.79
VRK3-209ENST00000594948 ACACAQ13085 2346 aa10.11□□□□□ -0.79
VRK3-209ENST00000594948 ZZEF1O43149 2961 aa10.11□□□□□ -0.79
VRK3-209ENST00000594948 TEX48A0A1B0GUV7 120 aa10.11□□□□□ -0.79
VRK3-209ENST00000594948 J3QR89 54 aa10.11□□□□□ -0.79
VRK3-209ENST00000594948 CCL21O00585 134 aa10.11□□□□□ -0.79
VRK3-209ENST00000594948 GLMPQ8WWB7 406 aa10.11□□□□□ -0.79
VRK3-209ENST00000594948 FAM223BA6NKX1 122 aa10.1□□□□□ -0.79
VRK3-209ENST00000594948 OVOL1O14753 267 aa10.1□□□□□ -0.79
VRK3-209ENST00000594948 CRIP2P52943 208 aaPredicted RBP10.1□□□□□ -0.79
VRK3-209ENST00000594948 FAM223AQ8IWN6 122 aa10.1□□□□□ -0.79
VRK3-209ENST00000594948 NEXN-AS1Q8NBZ9 246 aa10.1□□□□□ -0.79
VRK3-209ENST00000594948 DPH3P1Q9H4G8 78 aa10.1□□□□□ -0.79
VRK3-209ENST00000594948 CHTOPQ9Y3Y2 248 aaKnown RBP10.1□□□□□ -0.79
VRK3-209ENST00000594948 ANKRD11Q6UB99 2663 aaPredicted RBP10.1□□□□□ -0.79
VRK3-209ENST00000594948 TRAV26-2A0A0B4J265 109 aa10.1□□□□□ -0.79
VRK3-209ENST00000594948 TRAV21A0A0B4J279 112 aa10.1□□□□□ -0.79
VRK3-209ENST00000594948 IGHV3-66A0A0C4DH42 116 aa10.1□□□□□ -0.79
VRK3-209ENST00000594948 MYMXA0A1B0GTQ4 84 aa10.1□□□□□ -0.79
VRK3-209ENST00000594948 OR11H12B2RN74 326 aa10.1□□□□□ -0.79
VRK3-209ENST00000594948 H3BVH4 76 aa10.1□□□□□ -0.79
VRK3-209ENST00000594948 PPP1R17O96001 155 aa10.1□□□□□ -0.79
VRK3-209ENST00000594948 EFNA4P52798 201 aa10.1□□□□□ -0.79
VRK3-209ENST00000594948 SUMO2P61956 95 aaKnown RBP10.1□□□□□ -0.79
VRK3-209ENST00000594948 RPL24P83731 157 aaKnown RBP10.1□□□□□ -0.79
VRK3-209ENST00000594948 ATP5G2Q06055 141 aa10.1□□□□□ -0.79
VRK3-209ENST00000594948 RRN3P1Q2M238 152 aa10.1□□□□□ -0.79
VRK3-209ENST00000594948 OR11H1Q8NG94 326 aa10.1□□□□□ -0.79
VRK3-209ENST00000594948 OR11H2Q8NH07 326 aa10.1□□□□□ -0.79
VRK3-209ENST00000594948 C16orf92Q96LL3 132 aa10.1□□□□□ -0.79
VRK3-209ENST00000594948 HIST1H4GQ99525 98 aa10.1□□□□□ -0.79
VRK3-209ENST00000594948 TRBV7-9A0A0J9YWB2 115 aa10.09□□□□□ -0.79
VRK3-209ENST00000594948 LINC01549A6NIU2 74 aa10.09□□□□□ -0.79
VRK3-209ENST00000594948 NBL1P41271 181 aa10.09□□□□□ -0.79
VRK3-209ENST00000594948 ADORA2A-AS1P86434 159 aa10.09□□□□□ -0.79
VRK3-209ENST00000594948 SCGB3A1Q96QR1 104 aa10.09□□□□□ -0.79
VRK3-209ENST00000594948 SPANXB1Q9NS25 103 aaPredicted RBP10.09□□□□□ -0.79
VRK3-209ENST00000594948 AGRNO00468 2067 aa10.08□□□□□ -0.8
VRK3-209ENST00000594948 G3V318 75 aa10.08□□□□□ -0.8
VRK3-209ENST00000594948 C19orf54Q5BKX5 351 aa10.08□□□□□ -0.8
VRK3-209ENST00000594948 C5orf56Q8N8D9 126 aa10.08□□□□□ -0.8
VRK3-209ENST00000594948 SELENOKQ9Y6D0 94 aa10.08□□□□□ -0.8
VRK3-209ENST00000594948 PIEZO2Q9H5I5 2752 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms