RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 IGLV2-18A0A075B6J9 118 aa10.33□□□□□ -0.76
USE1-205ENST00000594724 BORCS7-ASMTA0A0B4J1R7 106 aa10.33□□□□□ -0.76
USE1-205ENST00000594724 SMLR1H3BR10 107 aa10.33□□□□□ -0.76
USE1-205ENST00000594724 HOXA5P20719 270 aa10.33□□□□□ -0.76
USE1-205ENST00000594724 GCHFRP30047 84 aa10.33□□□□□ -0.76
USE1-205ENST00000594724 GNG5P63218 68 aa10.33□□□□□ -0.76
USE1-205ENST00000594724 RNF212Q495C1 297 aa10.33□□□□□ -0.76
USE1-205ENST00000594724 MUC21Q5SSG8 566 aa10.33□□□□□ -0.76
USE1-205ENST00000594724 GOLT1AQ6ZVE7 132 aa10.33□□□□□ -0.76
USE1-205ENST00000594724 SSX7Q7RTT5 188 aa10.33□□□□□ -0.76
USE1-205ENST00000594724 TRAV26-1A0A087WT03 109 aa10.32□□□□□ -0.76
USE1-205ENST00000594724 TRGV1A0A0A0MS02 117 aa10.32□□□□□ -0.76
USE1-205ENST00000594724 TRAV8-1A0A0A6YYK1 113 aa10.32□□□□□ -0.76
USE1-205ENST00000594724 A0A0J9YY99 117 aa10.32□□□□□ -0.76
USE1-205ENST00000594724 ARPC5O15511 151 aa10.32□□□□□ -0.76
USE1-205ENST00000594724 TCL1AP56279 114 aa10.32□□□□□ -0.76
USE1-205ENST00000594724 GNPNAT1Q96EK6 184 aaPredicted RBP10.32□□□□□ -0.76
USE1-205ENST00000594724 ACTR3CQ9C0K3 210 aaPredicted RBP10.32□□□□□ -0.76
USE1-205ENST00000594724 TMPRSS5Q9H3S3 457 aa10.32□□□□□ -0.76
USE1-205ENST00000594724 FRAS1Q86XX4 4008 aa10.32□□□□□ -0.76
USE1-205ENST00000594724 TRGV2A0A075B6R0 118 aa10.31□□□□□ -0.76
USE1-205ENST00000594724 SUN5Q8TC36 379 aa10.31□□□□□ -0.76
USE1-205ENST00000594724 SGK494Q96LW2 274 aa10.31□□□□□ -0.76
USE1-205ENST00000594724 ARPC5LQ9BPX5 153 aa10.31□□□□□ -0.76
USE1-205ENST00000594724 ATG101Q9BSB4 218 aa10.31□□□□□ -0.76
USE1-205ENST00000594724 LENEPQ9Y5L5 61 aa10.31□□□□□ -0.76
USE1-205ENST00000594724 SPINK4O60575 86 aa10.3□□□□□ -0.76
USE1-205ENST00000594724 CXorf1O96002 111 aa10.3□□□□□ -0.76
USE1-205ENST00000594724 ZNF726P1Q15940 193 aa10.3□□□□□ -0.76
USE1-205ENST00000594724 IBA57Q5T440 356 aaKnown RBP10.3□□□□□ -0.76
USE1-205ENST00000594724 Q6AWC8 147 aa10.3□□□□□ -0.76
USE1-205ENST00000594724 IQCF2Q8IXL9 164 aa10.3□□□□□ -0.76
USE1-205ENST00000594724 ARL6IP6Q8N6S5 226 aa10.3□□□□□ -0.76
USE1-205ENST00000594724 TMED6Q8WW62 240 aa10.3□□□□□ -0.76
USE1-205ENST00000594724 TVP23CQ96ET8 276 aa10.3□□□□□ -0.76
USE1-205ENST00000594724 ST6GAL2Q96JF0 529 aa10.3□□□□□ -0.76
USE1-205ENST00000594724 CYTL1Q9NRR1 136 aa10.3□□□□□ -0.76
USE1-205ENST00000594724 F6UZH7 168 aa10.29□□□□□ -0.76
USE1-205ENST00000594724 SUMO1P63165 101 aaKnown RBP10.29□□□□□ -0.76
USE1-205ENST00000594724 LGALS9BQ3B8N2 356 aa10.29□□□□□ -0.76
USE1-205ENST00000594724 TMEM167BQ9NRX6 74 aa10.29□□□□□ -0.76
USE1-205ENST00000594724 MRPL16Q9NX20 251 aaKnown RBP10.29□□□□□ -0.76
USE1-205ENST00000594724 MDFICQ9P1T7 246 aa10.29□□□□□ -0.76
USE1-205ENST00000594724 DNAH2Q9P225 4427 aa10.28□□□□□ -0.76
USE1-205ENST00000594724 TAAR5O14804 337 aa10.28□□□□□ -0.76
USE1-205ENST00000594724 IGHV3-53P01767 116 aa10.28□□□□□ -0.76
USE1-205ENST00000594724 TCRAP04437 139 aa10.28□□□□□ -0.76
USE1-205ENST00000594724 ZNF415Q09FC8 603 aa10.28□□□□□ -0.76
USE1-205ENST00000594724 TMEM183BQ1AE95 376 aa10.28□□□□□ -0.76
USE1-205ENST00000594724 FAM159AQ6UWV7 190 aa10.28□□□□□ -0.76
USE1-205ENST00000594724 TMEM183AQ8IXX5 376 aa10.28□□□□□ -0.76
USE1-205ENST00000594724 C5orf17Q8NAS9 161 aa10.28□□□□□ -0.76
USE1-205ENST00000594724 TREM1Q9NP99 234 aa10.28□□□□□ -0.76
USE1-205ENST00000594724 NAGKQ9UJ70 344 aa10.28□□□□□ -0.76
USE1-205ENST00000594724 CTXND1A0A1B0GTU2 59 aa10.27□□□□□ -0.77
USE1-205ENST00000594724 GGTLC3B5MD39 225 aa10.27□□□□□ -0.77
USE1-205ENST00000594724 CCL18P55774 89 aa10.27□□□□□ -0.77
USE1-205ENST00000594724 AKR1C8PQ5T2L2 129 aa10.27□□□□□ -0.77
USE1-205ENST00000594724 Q6ZR54 194 aa10.27□□□□□ -0.77
USE1-205ENST00000594724 OR11H4Q8NGC9 324 aa10.27□□□□□ -0.77
USE1-205ENST00000594724 C18orf15Q96N68 181 aa10.27□□□□□ -0.77
USE1-205ENST00000594724 EPDR1Q9UM22 224 aa10.27□□□□□ -0.77
USE1-205ENST00000594724 LINC00588Q9Y4M8 146 aa10.27□□□□□ -0.77
USE1-205ENST00000594724 NACAE9PAV3 2078 aa10.26□□□□□ -0.77
USE1-205ENST00000594724 RTL8CO15255 209 aa10.26□□□□□ -0.77
USE1-205ENST00000594724 GNRH2O43555 120 aa10.26□□□□□ -0.77
USE1-205ENST00000594724 FGF8P55075 233 aaPredicted RBP10.26□□□□□ -0.77
USE1-205ENST00000594724 FAM3BP58499 235 aaPredicted RBP10.26□□□□□ -0.77
USE1-205ENST00000594724 ZNRF2Q8NHG8 242 aa10.26□□□□□ -0.77
USE1-205ENST00000594724 VSIG2Q96IQ7 327 aa10.26□□□□□ -0.77
USE1-205ENST00000594724 C8orf49Q96NF6 230 aa10.26□□□□□ -0.77
USE1-205ENST00000594724 PSG8Q9UQ74 426 aa10.26□□□□□ -0.77
USE1-205ENST00000594724 TRAV21A0A0B4J279 112 aa10.25□□□□□ -0.77
USE1-205ENST00000594724 SERTM2A0A1B0GWG4 89 aa10.25□□□□□ -0.77
USE1-205ENST00000594724 UBE2G2P60604 165 aa10.25□□□□□ -0.77
USE1-205ENST00000594724 KCNRGQ8N5I3 272 aa10.25□□□□□ -0.77
USE1-205ENST00000594724 TRGV11A0A075B6L2 103 aa10.24□□□□□ -0.77
USE1-205ENST00000594724 A0A1W2PRE2 83 aa10.24□□□□□ -0.77
USE1-205ENST00000594724 H3BNG1 76 aa10.24□□□□□ -0.77
USE1-205ENST00000594724 K7EQM0 130 aa10.24□□□□□ -0.77
USE1-205ENST00000594724 IGLV2-11P01706 119 aa10.24□□□□□ -0.77
USE1-205ENST00000594724 ZNF80P51504 273 aaPredicted RBP10.24□□□□□ -0.77
USE1-205ENST00000594724 FLI1Q01543 452 aaPredicted RBP10.24□□□□□ -0.77
USE1-205ENST00000594724 ESRGQ1W209 222 aa10.24□□□□□ -0.77
USE1-205ENST00000594724 TDRG1Q3Y452 100 aa10.24□□□□□ -0.77
USE1-205ENST00000594724 LINC00336Q6ZUF6 198 aa10.24□□□□□ -0.77
USE1-205ENST00000594724 PRNTQ86SH4 94 aa10.24□□□□□ -0.77
USE1-205ENST00000594724 LINC00479Q96M42 142 aa10.24□□□□□ -0.77
USE1-205ENST00000594724 SPXQ9BT56 116 aa10.24□□□□□ -0.77
USE1-205ENST00000594724 NDFIP1Q9BT67 221 aa10.24□□□□□ -0.77
USE1-205ENST00000594724 TRAV34A0A0B4J273 112 aa10.23□□□□□ -0.77
USE1-205ENST00000594724 CYB561D1Q8N8Q1 229 aa10.23□□□□□ -0.77
USE1-205ENST00000594724 A0A096LPF7 62 aa10.22□□□□□ -0.77
USE1-205ENST00000594724 IGHV3-16A0A0C4DH30 117 aa10.22□□□□□ -0.77
USE1-205ENST00000594724 MAP1LC3B2A6NCE7 125 aa10.22□□□□□ -0.77
USE1-205ENST00000594724 PRSS29PA6NIE9 313 aa10.22□□□□□ -0.77
USE1-205ENST00000594724 HMSDA8MTL9 139 aa10.22□□□□□ -0.77
USE1-205ENST00000594724 PAX4O43316 350 aa10.22□□□□□ -0.77
USE1-205ENST00000594724 GCGP01275 180 aa10.22□□□□□ -0.77
USE1-205ENST00000594724 IFNA7P01567 189 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms