RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 CSTL1Q9H114 145 aa7.95□□□□□ -1.14
USE1-204ENST00000594399 TRBV20OR9-2A0A075B6H5 130 aa7.94□□□□□ -1.14
USE1-204ENST00000594399 TRAV12-2A0A075B6T6 113 aa7.94□□□□□ -1.14
USE1-204ENST00000594399 J3KRW8 73 aa7.94□□□□□ -1.14
USE1-204ENST00000594399 GPX1P07203 203 aa7.94□□□□□ -1.14
USE1-204ENST00000594399 SMUG1Q53HV7 270 aa7.94□□□□□ -1.14
USE1-204ENST00000594399 GFI1BQ5VTD9 330 aa7.94□□□□□ -1.14
USE1-204ENST00000594399 TMEM183AQ8IXX5 376 aa7.94□□□□□ -1.14
USE1-204ENST00000594399 C8orf49Q96NF6 230 aa7.94□□□□□ -1.14
USE1-204ENST00000594399 AGRNO00468 2067 aa7.94□□□□□ -1.14
USE1-204ENST00000594399 C7orf71A4D174 169 aa7.93□□□□□ -1.14
USE1-204ENST00000594399 UBE2CO00762 179 aa7.93□□□□□ -1.14
USE1-204ENST00000594399 CRXO43186 299 aaPredicted RBP7.93□□□□□ -1.14
USE1-204ENST00000594399 GCGP01275 180 aa7.93□□□□□ -1.14
USE1-204ENST00000594399 GIG44P09565 113 aaPredicted RBP7.93□□□□□ -1.14
USE1-204ENST00000594399 RNASE4P34096 147 aaKnown RBP7.93□□□□□ -1.14
USE1-204ENST00000594399 BTN1A1Q13410 526 aa7.93□□□□□ -1.14
USE1-204ENST00000594399 KIR3DS1Q14943 382 aa7.93□□□□□ -1.14
USE1-204ENST00000594399 DEFB121Q5J5C9 76 aa7.93□□□□□ -1.14
USE1-204ENST00000594399 PRR9Q5T870 116 aa7.93□□□□□ -1.14
USE1-204ENST00000594399 COX8CQ7Z4L0 72 aa7.93□□□□□ -1.14
USE1-204ENST00000594399 ZC2HC1AQ96GY0 325 aa7.93□□□□□ -1.14
USE1-204ENST00000594399 XCL2Q9UBD3 114 aa7.93□□□□□ -1.14
USE1-204ENST00000594399 TMEM218A2RU14 115 aa7.92□□□□□ -1.14
USE1-204ENST00000594399 PGPEP1LA6NFU8 196 aa7.92□□□□□ -1.14
USE1-204ENST00000594399 MGST1P10620 155 aaKnown RBP7.92□□□□□ -1.14
USE1-204ENST00000594399 Q6AWC8 147 aa7.92□□□□□ -1.14
USE1-204ENST00000594399 C20orf144Q9BQM9 153 aa7.92□□□□□ -1.14
USE1-204ENST00000594399 NIPSNAP3BQ9BS92 247 aa7.92□□□□□ -1.14
USE1-204ENST00000594399 MLST8Q9BVC4 326 aa7.92□□□□□ -1.14
USE1-204ENST00000594399 NAT8Q9UHE5 227 aa7.92□□□□□ -1.14
USE1-204ENST00000594399 GOLT1BQ9Y3E0 138 aa7.92□□□□□ -1.14
USE1-204ENST00000594399 LY96Q9Y6Y9 160 aa7.92□□□□□ -1.14
USE1-204ENST00000594399 TRAV12-3A0A0B4J271 114 aa7.91□□□□□ -1.14
USE1-204ENST00000594399 TRAV21A0A0B4J279 112 aa7.91□□□□□ -1.14
USE1-204ENST00000594399 IGLV2-8P01709 118 aa7.91□□□□□ -1.14
USE1-204ENST00000594399 PFN1P07737 140 aaKnown RBP7.91□□□□□ -1.14
USE1-204ENST00000594399 ZNF80P51504 273 aaPredicted RBP7.91□□□□□ -1.14
USE1-204ENST00000594399 TMEM241Q24JQ0 296 aa7.91□□□□□ -1.14
USE1-204ENST00000594399 PRR27Q6MZM9 219 aa7.91□□□□□ -1.14
USE1-204ENST00000594399 SLC7A5P1Q8MH63 180 aa7.91□□□□□ -1.14
USE1-204ENST00000594399 BIN3Q9NQY0 253 aa7.91□□□□□ -1.14
USE1-204ENST00000594399 F8W036 122 aa7.9□□□□□ -1.14
USE1-204ENST00000594399 K7EN84 100 aa7.9□□□□□ -1.14
USE1-204ENST00000594399 RBMY1A1P0DJD3 496 aaKnown RBP7.9□□□□□ -1.14
USE1-204ENST00000594399 RBMY1CP0DJD4 496 aa7.9□□□□□ -1.14
USE1-204ENST00000594399 ADCYAP1P18509 176 aa7.9□□□□□ -1.14
USE1-204ENST00000594399 RBMY1FQ15415 496 aaKnown RBP7.9□□□□□ -1.14
USE1-204ENST00000594399 DEFB135Q30KP9 77 aa7.9□□□□□ -1.14
USE1-204ENST00000594399 FAM162BQ5T6X4 162 aa7.9□□□□□ -1.14
USE1-204ENST00000594399 Q6ZWC4 215 aa7.9□□□□□ -1.14
USE1-204ENST00000594399 LINC01551Q86U37 167 aa7.9□□□□□ -1.14
USE1-204ENST00000594399 TMEM256Q8N2U0 113 aa7.9□□□□□ -1.14
USE1-204ENST00000594399 CSNK1G2-AS1Q8NCQ2 148 aa7.9□□□□□ -1.14
USE1-204ENST00000594399 OCC1Q8TAD7 63 aa7.9□□□□□ -1.14
USE1-204ENST00000594399 TMEM208Q9BTX3 173 aa7.9□□□□□ -1.14
USE1-204ENST00000594399 SEC11CQ9BY50 192 aa7.9□□□□□ -1.14
USE1-204ENST00000594399 FABP5P3A8MUU1 101 aa7.89□□□□□ -1.15
USE1-204ENST00000594399 SH2D1AO60880 128 aa7.89□□□□□ -1.15
USE1-204ENST00000594399 ZNF324O75467 553 aaPredicted RBP7.89□□□□□ -1.15
USE1-204ENST00000594399 RPL23P62829 140 aaKnown RBP7.89□□□□□ -1.15
USE1-204ENST00000594399 ADIRFQ15847 76 aa7.89□□□□□ -1.15
USE1-204ENST00000594399 ZNF705AQ6ZN79 300 aaPredicted RBP7.89□□□□□ -1.15
USE1-204ENST00000594399 C1orf158Q8N1D5 194 aa7.89□□□□□ -1.15
USE1-204ENST00000594399 RCHY1Q96PM5 261 aa7.89□□□□□ -1.15
USE1-204ENST00000594399 NAGKQ9UJ70 344 aa7.89□□□□□ -1.15
USE1-204ENST00000594399 IGHV3OR16-12A0A075B7B8 117 aa7.88□□□□□ -1.15
USE1-204ENST00000594399 H7BYZ3 331 aa7.88□□□□□ -1.15
USE1-204ENST00000594399 CRIP1P50238 77 aa7.88□□□□□ -1.15
USE1-204ENST00000594399 PNRC1Q12796 327 aaPredicted RBP7.88□□□□□ -1.15
USE1-204ENST00000594399 OR5I1Q13606 314 aa7.88□□□□□ -1.15
USE1-204ENST00000594399 Q6ZQT7 251 aa7.88□□□□□ -1.15
USE1-204ENST00000594399 SBSPONQ8IVN8 264 aa7.88□□□□□ -1.15
USE1-204ENST00000594399 RNF183Q96D59 192 aa7.88□□□□□ -1.15
USE1-204ENST00000594399 DAZAP1Q96EP5 407 aaKnown RBP7.88□□□□□ -1.15
USE1-204ENST00000594399 LINC01587Q99440 93 aa7.88□□□□□ -1.15
USE1-204ENST00000594399 PYGO2Q9BRQ0 406 aa7.88□□□□□ -1.15
USE1-204ENST00000594399 SDF2L1Q9HCN8 221 aa7.88□□□□□ -1.15
USE1-204ENST00000594399 TP53TG1Q9Y2A0 90 aa7.88□□□□□ -1.15
USE1-204ENST00000594399 IGHV1OR15-1A0A075B7D0 117 aa7.87□□□□□ -1.15
USE1-204ENST00000594399 C19orf71A6NCJ1 209 aa7.87□□□□□ -1.15
USE1-204ENST00000594399 KRBOX1C9JBD0 128 aa7.87□□□□□ -1.15
USE1-204ENST00000594399 SPRY2O43597 315 aa7.87□□□□□ -1.15
USE1-204ENST00000594399 P01737 135 aa7.87□□□□□ -1.15
USE1-204ENST00000594399 MUC21Q5SSG8 566 aa7.87□□□□□ -1.15
USE1-204ENST00000594399 IBA57Q5T440 356 aaKnown RBP7.87□□□□□ -1.15
USE1-204ENST00000594399 FAM159AQ6UWV7 190 aa7.87□□□□□ -1.15
USE1-204ENST00000594399 ISOC2Q96AB3 205 aa7.87□□□□□ -1.15
USE1-204ENST00000594399 B9D2Q9BPU9 175 aa7.87□□□□□ -1.15
USE1-204ENST00000594399 SPATA25Q9BR10 227 aa7.87□□□□□ -1.15
USE1-204ENST00000594399 LINC00467Q9BRT7 94 aa7.87□□□□□ -1.15
USE1-204ENST00000594399 CARHSP1Q9Y2V2 147 aaKnown RBP7.87□□□□□ -1.15
USE1-204ENST00000594399 CBY3A6NI87 242 aa7.86□□□□□ -1.15
USE1-204ENST00000594399 M0R036 132 aa7.86□□□□□ -1.15
USE1-204ENST00000594399 ERVFC1-1P60608 527 aa7.86□□□□□ -1.15
USE1-204ENST00000594399 ANXA2RQ3ZCQ2 193 aa7.86□□□□□ -1.15
USE1-204ENST00000594399 LINC01559Q495D7 138 aa7.86□□□□□ -1.15
USE1-204ENST00000594399 C10orf91Q5T1B1 145 aa7.86□□□□□ -1.15
USE1-204ENST00000594399 FAM231DQ6ZW35 169 aa7.86□□□□□ -1.15
USE1-204ENST00000594399 KCNS1Q96KK3 526 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms