RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 C9orf62Q8N4C0 152 aa9.68□□□□□ -0.86
APOC1-208ENST00000592535 GNPNAT1Q96EK6 184 aaPredicted RBP9.68□□□□□ -0.86
APOC1-208ENST00000592535 KLF12Q9Y4X4 402 aa9.68□□□□□ -0.86
APOC1-208ENST00000592535 DNAH2Q9P225 4427 aa9.67□□□□□ -0.86
APOC1-208ENST00000592535 IGHV1OR15-1A0A075B7D0 117 aa9.67□□□□□ -0.86
APOC1-208ENST00000592535 TRBV7-9A0A0J9YWB2 115 aa9.67□□□□□ -0.86
APOC1-208ENST00000592535 HMGB3O15347 200 aaKnown RBP9.67□□□□□ -0.86
APOC1-208ENST00000592535 NKX2-5P52952 324 aaPredicted RBP9.67□□□□□ -0.86
APOC1-208ENST00000592535 CCL18P55774 89 aa9.67□□□□□ -0.86
APOC1-208ENST00000592535 TCL1AP56279 114 aa9.67□□□□□ -0.86
APOC1-208ENST00000592535 PQLC2Q6ZP29 291 aa9.67□□□□□ -0.86
APOC1-208ENST00000592535 KCNRGQ8N5I3 272 aa9.67□□□□□ -0.86
APOC1-208ENST00000592535 HSD17B11Q8NBQ5 300 aa9.67□□□□□ -0.86
APOC1-208ENST00000592535 OR10G4Q8NGN3 311 aa9.67□□□□□ -0.86
APOC1-208ENST00000592535 OR10G9Q8NGN4 311 aa9.67□□□□□ -0.86
APOC1-208ENST00000592535 OR10G7Q8NGN6 311 aa9.67□□□□□ -0.86
APOC1-208ENST00000592535 ZNRF2Q8NHG8 242 aa9.67□□□□□ -0.86
APOC1-208ENST00000592535 RXFP4Q8TDU9 374 aa9.67□□□□□ -0.86
APOC1-208ENST00000592535 OTORQ9NRC9 128 aa9.67□□□□□ -0.86
APOC1-208ENST00000592535 RPH3ALQ9UNE2 315 aa9.67□□□□□ -0.86
APOC1-208ENST00000592535 LINC00588Q9Y4M8 146 aa9.67□□□□□ -0.86
APOC1-208ENST00000592535 DNAH17Q9UFH2 4485 aa9.66□□□□□ -0.86
APOC1-208ENST00000592535 MUC4Q99102 2169 aa9.66□□□□□ -0.86
APOC1-208ENST00000592535 FAT2Q9NYQ8 4349 aa9.66□□□□□ -0.86
APOC1-208ENST00000592535 TRGV2A0A075B6R0 118 aa9.66□□□□□ -0.86
APOC1-208ENST00000592535 TRGV1A0A0A0MS02 117 aa9.66□□□□□ -0.86
APOC1-208ENST00000592535 A0A0D9SG52 128 aa9.66□□□□□ -0.86
APOC1-208ENST00000592535 PGPA6NDG6 321 aa9.66□□□□□ -0.86
APOC1-208ENST00000592535 ARPC5O15511 151 aa9.66□□□□□ -0.86
APOC1-208ENST00000592535 SPINK4O60575 86 aa9.66□□□□□ -0.86
APOC1-208ENST00000592535 ZNF266Q14584 549 aa9.66□□□□□ -0.86
APOC1-208ENST00000592535 ZNF345Q14585 488 aa9.66□□□□□ -0.86
APOC1-208ENST00000592535 IBA57Q5T440 356 aaKnown RBP9.66□□□□□ -0.86
APOC1-208ENST00000592535 ATP6V0CP27449 155 aa9.65□□□□□ -0.86
APOC1-208ENST00000592535 CDC34P49427 236 aaPredicted RBP9.65□□□□□ -0.86
APOC1-208ENST00000592535 MUC21Q5SSG8 566 aa9.65□□□□□ -0.86
APOC1-208ENST00000592535 TMUB2Q71RG4 321 aa9.65□□□□□ -0.86
APOC1-208ENST00000592535 INO80EQ8NBZ0 244 aaPredicted RBP9.65□□□□□ -0.86
APOC1-208ENST00000592535 OR2G3Q8NGZ4 309 aa9.65□□□□□ -0.86
APOC1-208ENST00000592535 CMTM2Q8TAZ6 248 aa9.65□□□□□ -0.86
APOC1-208ENST00000592535 C18orf15Q96N68 181 aa9.65□□□□□ -0.86
APOC1-208ENST00000592535 ARPC5LQ9BPX5 153 aa9.65□□□□□ -0.86
APOC1-208ENST00000592535 MRPL16Q9NX20 251 aaKnown RBP9.65□□□□□ -0.86
APOC1-208ENST00000592535 HECTD4Q9Y4D8 3996 aa9.65□□□□□ -0.87
APOC1-208ENST00000592535 ARL14EPLP0DKL9 152 aa9.64□□□□□ -0.87
APOC1-208ENST00000592535 FAM74A1Q5RGS3 127 aa9.64□□□□□ -0.87
APOC1-208ENST00000592535 C1orf134Q5TEV5 83 aa9.64□□□□□ -0.87
APOC1-208ENST00000592535 SSX7Q7RTT5 188 aa9.64□□□□□ -0.87
APOC1-208ENST00000592535 PSMG3Q9BT73 122 aaPredicted RBP9.64□□□□□ -0.87
APOC1-208ENST00000592535 CYTL1Q9NRR1 136 aa9.64□□□□□ -0.87
APOC1-208ENST00000592535 LENEPQ9Y5L5 61 aa9.64□□□□□ -0.87
APOC1-208ENST00000592535 NBDYA0A0U1RRE5 68 aa9.63□□□□□ -0.87
APOC1-208ENST00000592535 H3BNG1 76 aa9.63□□□□□ -0.87
APOC1-208ENST00000592535 GNG5P63218 68 aa9.63□□□□□ -0.87
APOC1-208ENST00000592535 ZNF415Q09FC8 603 aa9.63□□□□□ -0.87
APOC1-208ENST00000592535 SOHLH1Q5JUK2 328 aa9.63□□□□□ -0.87
APOC1-208ENST00000592535 Q6AWC8 147 aa9.63□□□□□ -0.87
APOC1-208ENST00000592535 GOLT1AQ6ZVE7 132 aa9.63□□□□□ -0.87
APOC1-208ENST00000592535 TMED6Q8WW62 240 aa9.63□□□□□ -0.87
APOC1-208ENST00000592535 VSIG2Q96IQ7 327 aa9.63□□□□□ -0.87
APOC1-208ENST00000592535 SH3BGRL3Q9H299 93 aa9.63□□□□□ -0.87
APOC1-208ENST00000592535 BOLA1Q9Y3E2 137 aa9.63□□□□□ -0.87
APOC1-208ENST00000592535 TRAV8-1A0A0A6YYK1 113 aa9.62□□□□□ -0.87
APOC1-208ENST00000592535 IGHV3-53P01767 116 aa9.62□□□□□ -0.87
APOC1-208ENST00000592535 STAG3L2P0CL84 134 aa9.62□□□□□ -0.87
APOC1-208ENST00000592535 STAG3L3P0CL85 134 aa9.62□□□□□ -0.87
APOC1-208ENST00000592535 ESRGQ1W209 222 aa9.62□□□□□ -0.87
APOC1-208ENST00000592535 RAB24Q969Q5 203 aa9.62□□□□□ -0.87
APOC1-208ENST00000592535 MDFICQ9P1T7 246 aa9.62□□□□□ -0.87
APOC1-208ENST00000592535 A0A096LPF7 62 aa9.61□□□□□ -0.87
APOC1-208ENST00000592535 TAAR5O14804 337 aa9.61□□□□□ -0.87
APOC1-208ENST00000592535 GCHFRP30047 84 aa9.61□□□□□ -0.87
APOC1-208ENST00000592535 SERF2P84101 59 aa9.61□□□□□ -0.87
APOC1-208ENST00000592535 TMEM183BQ1AE95 376 aa9.61□□□□□ -0.87
APOC1-208ENST00000592535 RPL7L1Q6DKI1 246 aaKnown RBP9.61□□□□□ -0.87
APOC1-208ENST00000592535 TMEM183AQ8IXX5 376 aa9.61□□□□□ -0.87
APOC1-208ENST00000592535 ARL6IP6Q8N6S5 226 aa9.61□□□□□ -0.87
APOC1-208ENST00000592535 TVP23CQ96ET8 276 aa9.61□□□□□ -0.87
APOC1-208ENST00000592535 NAGKQ9UJ70 344 aa9.61□□□□□ -0.87
APOC1-208ENST00000592535 F6UZH7 168 aa9.6□□□□□ -0.87
APOC1-208ENST00000592535 MBP02144 154 aa9.6□□□□□ -0.87
APOC1-208ENST00000592535 FAM159AQ6UWV7 190 aa9.6□□□□□ -0.87
APOC1-208ENST00000592535 SUN5Q8TC36 379 aa9.6□□□□□ -0.87
APOC1-208ENST00000592535 SGK494Q96LW2 274 aa9.6□□□□□ -0.87
APOC1-208ENST00000592535 Q9H8V8 135 aa9.6□□□□□ -0.87
APOC1-208ENST00000592535 TRGV11A0A075B6L2 103 aa9.59□□□□□ -0.87
APOC1-208ENST00000592535 BCL2L11O43521 198 aa9.59□□□□□ -0.87
APOC1-208ENST00000592535 C6orf223Q8N319 242 aa9.59□□□□□ -0.87
APOC1-208ENST00000592535 C5orf17Q8NAS9 161 aa9.59□□□□□ -0.87
APOC1-208ENST00000592535 UPK3BQ9BT76 320 aa9.59□□□□□ -0.87
APOC1-208ENST00000592535 ACTR3CQ9C0K3 210 aaPredicted RBP9.59□□□□□ -0.87
APOC1-208ENST00000592535 TREM1Q9NP99 234 aa9.59□□□□□ -0.87
APOC1-208ENST00000592535 MRPS16Q9Y3D3 137 aaKnown RBP9.59□□□□□ -0.87
APOC1-208ENST00000592535 BORCS7-ASMTA0A0B4J1R7 106 aa9.58□□□□□ -0.88
APOC1-208ENST00000592535 PAX4O43316 350 aa9.58□□□□□ -0.88
APOC1-208ENST00000592535 CXorf1O96002 111 aa9.58□□□□□ -0.88
APOC1-208ENST00000592535 TCRAP04437 139 aa9.58□□□□□ -0.88
APOC1-208ENST00000592535 FHL2Q14192 279 aa9.58□□□□□ -0.88
APOC1-208ENST00000592535 TDRG1Q3Y452 100 aa9.58□□□□□ -0.88
APOC1-208ENST00000592535 SPXQ9BT56 116 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms