RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 CGB3P0DN86 165 aa9.61□□□□□ -0.87
SMARCA4-217ENST00000591595 CGB7P0DN87 165 aa9.61□□□□□ -0.87
SMARCA4-217ENST00000591595 RNASE2P10153 161 aaKnown RBP9.61□□□□□ -0.87
SMARCA4-217ENST00000591595 C2orf83Q53S99 150 aa9.61□□□□□ -0.87
SMARCA4-217ENST00000591595 C10orf55Q5SWW7 151 aa9.61□□□□□ -0.87
SMARCA4-217ENST00000591595 C10orf113Q5VZT2 155 aa9.61□□□□□ -0.87
SMARCA4-217ENST00000591595 SLC25A2Q9BXI2 301 aa9.61□□□□□ -0.87
SMARCA4-217ENST00000591595 MRPL20Q9BYC9 149 aaKnown RBP9.61□□□□□ -0.87
SMARCA4-217ENST00000591595 ATP5LO75964 103 aa9.6□□□□□ -0.87
SMARCA4-217ENST00000591595 ZNF672Q499Z4 452 aaPredicted RBP9.6□□□□□ -0.87
SMARCA4-217ENST00000591595 NTN5Q8WTR8 489 aaPredicted RBP9.6□□□□□ -0.87
SMARCA4-217ENST00000591595 AAMDCQ9H7C9 122 aa9.6□□□□□ -0.87
SMARCA4-217ENST00000591595 DSCAMO60469 2012 aa9.6□□□□□ -0.87
SMARCA4-217ENST00000591595 A0A1B0GUT8 65 aa9.6□□□□□ -0.87
SMARCA4-217ENST00000591595 PRSS1P07477 247 aa9.6□□□□□ -0.87
SMARCA4-217ENST00000591595 GAGE2AQ6NT46 116 aa9.6□□□□□ -0.87
SMARCA4-217ENST00000591595 ZNF329Q86UD4 541 aa9.6□□□□□ -0.87
SMARCA4-217ENST00000591595 RPUSD1Q9UJJ7 312 aaKnown RBP9.6□□□□□ -0.87
SMARCA4-217ENST00000591595 ZFHX4Q86UP3 3567 aa9.6□□□□□ -0.87
SMARCA4-217ENST00000591595 TINCRA0A1B0GVN0 87 aa9.6□□□□□ -0.87
SMARCA4-217ENST00000591595 DLL1O00548 723 aa9.6□□□□□ -0.87
SMARCA4-217ENST00000591595 ENSAO43768 121 aaKnown RBP9.6□□□□□ -0.87
SMARCA4-217ENST00000591595 DPM2O94777 84 aa9.6□□□□□ -0.87
SMARCA4-217ENST00000591595 CCL3L1P16619 93 aa9.6□□□□□ -0.87
SMARCA4-217ENST00000591595 DKK4Q9UBT3 224 aa9.6□□□□□ -0.87
SMARCA4-217ENST00000591595 NAV3Q8IVL0 2385 aa9.59□□□□□ -0.87
SMARCA4-217ENST00000591595 LHBP01229 141 aa9.59□□□□□ -0.87
SMARCA4-217ENST00000591595 APELAP0DMC3 54 aa9.59□□□□□ -0.87
SMARCA4-217ENST00000591595 ZCCHC24Q8N2G6 241 aaKnown RBP9.59□□□□□ -0.87
SMARCA4-217ENST00000591595 IGFBPL1Q8WX77 278 aa9.59□□□□□ -0.87
SMARCA4-217ENST00000591595 GAFA1Q96PS6 74 aa9.59□□□□□ -0.87
SMARCA4-217ENST00000591595 SSUH2Q9Y2M2 353 aa9.59□□□□□ -0.87
SMARCA4-217ENST00000591595 BDP1A6H8Y1 2624 aa9.59□□□□□ -0.87
SMARCA4-217ENST00000591595 PLXNB1O43157 2135 aa9.59□□□□□ -0.87
SMARCA4-217ENST00000591595 TTC28Q96AY4 2481 aa9.59□□□□□ -0.87
SMARCA4-217ENST00000591595 TRGV11A0A075B6L2 103 aa9.59□□□□□ -0.87
SMARCA4-217ENST00000591595 C19orf71A6NCJ1 209 aa9.59□□□□□ -0.87
SMARCA4-217ENST00000591595 D6R8Y8 96 aa9.59□□□□□ -0.87
SMARCA4-217ENST00000591595 TIMM23O14925 209 aa9.59□□□□□ -0.87
SMARCA4-217ENST00000591595 TWIST1Q15672 202 aa9.59□□□□□ -0.87
SMARCA4-217ENST00000591595 SLC25A48Q6ZT89 311 aaKnown RBP9.59□□□□□ -0.87
SMARCA4-217ENST00000591595 IGHV1-46P01743 117 aa9.58□□□□□ -0.88
SMARCA4-217ENST00000591595 CRYGDP07320 174 aa9.58□□□□□ -0.88
SMARCA4-217ENST00000591595 ARMS2P0C7Q2 107 aa9.58□□□□□ -0.88
SMARCA4-217ENST00000591595 PMVKQ15126 192 aa9.58□□□□□ -0.88
SMARCA4-217ENST00000591595 CFAP47Q6ZTR5 3102 aa9.58□□□□□ -0.88
SMARCA4-217ENST00000591595 RIGQ13278 110 aa9.58□□□□□ -0.88
SMARCA4-217ENST00000591595 ZNF56Q15929 161 aa9.58□□□□□ -0.88
SMARCA4-217ENST00000591595 TEX36Q5VZQ5 186 aa9.58□□□□□ -0.88
SMARCA4-217ENST00000591595 TMEM160Q9NX00 188 aa9.58□□□□□ -0.88
SMARCA4-217ENST00000591595 ZNF492Q9P255 531 aa9.58□□□□□ -0.88
SMARCA4-217ENST00000591595 PRO0628Q9UI54 55 aa9.58□□□□□ -0.88
SMARCA4-217ENST00000591595 TRBV7-7A0A0K0K1E9 115 aa9.58□□□□□ -0.88
SMARCA4-217ENST00000591595 NCBP2LA6PVI3 153 aaKnown RBP9.58□□□□□ -0.88
SMARCA4-217ENST00000591595 LINC01619G3V211 115 aa9.58□□□□□ -0.88
SMARCA4-217ENST00000591595 H3BTX0 84 aa9.58□□□□□ -0.88
SMARCA4-217ENST00000591595 RS1O15537 224 aa9.58□□□□□ -0.88
SMARCA4-217ENST00000591595 SUB1P53999 127 aaKnown RBP eCLIP9.58□□□□□ -0.887e-8■■■□□ 19.1
SMARCA4-217ENST00000591595 DLX6P56179 175 aa9.58□□□□□ -0.88
SMARCA4-217ENST00000591595 PAX8Q06710 450 aa9.58□□□□□ -0.88
SMARCA4-217ENST00000591595 POLEQ07864 2286 aa9.57□□□□□ -0.88
SMARCA4-217ENST00000591595 IGHV3-21A0A0B4J1V1 117 aa9.57□□□□□ -0.88
SMARCA4-217ENST00000591595 WT1P19544 449 aaPredicted RBP9.57□□□□□ -0.88
SMARCA4-217ENST00000591595 MALP21145 153 aa9.57□□□□□ -0.88
SMARCA4-217ENST00000591595 FAM27E3Q08E93 113 aa9.57□□□□□ -0.88
SMARCA4-217ENST00000591595 LINC00305Q7Z4B0 112 aa9.57□□□□□ -0.88
SMARCA4-217ENST00000591595 MLST8Q9BVC4 326 aa9.57□□□□□ -0.88
SMARCA4-217ENST00000591595 SPTBN2O15020 2390 aa9.57□□□□□ -0.88
SMARCA4-217ENST00000591595 E7EUB6 86 aa9.57□□□□□ -0.88
SMARCA4-217ENST00000591595 CD3EP07766 207 aa9.57□□□□□ -0.88
SMARCA4-217ENST00000591595 UBE2D1P51668 147 aa9.57□□□□□ -0.88
SMARCA4-217ENST00000591595 Q5XG85 94 aa9.57□□□□□ -0.88
SMARCA4-217ENST00000591595 HCP5Q6MZN7 132 aa9.57□□□□□ -0.88
SMARCA4-217ENST00000591595 FAM167A-AS1Q96KT0 104 aa9.57□□□□□ -0.88
SMARCA4-217ENST00000591595 FOXC2Q99958 501 aa9.57□□□□□ -0.88
SMARCA4-217ENST00000591595 IGHV3-72A0A0B4J1Y9 119 aa9.56□□□□□ -0.88
SMARCA4-217ENST00000591595 PGPA6NDG6 321 aa9.56□□□□□ -0.88
SMARCA4-217ENST00000591595 EFNA4P52798 201 aa9.56□□□□□ -0.88
SMARCA4-217ENST00000591595 SEM1Q6ZVN7 128 aa9.56□□□□□ -0.88
SMARCA4-217ENST00000591595 COL27A1Q8IZC6 1860 aaPredicted RBP9.56□□□□□ -0.88
SMARCA4-217ENST00000591595 TRAV40A0A0B4J280 105 aa9.56□□□□□ -0.88
SMARCA4-217ENST00000591595 TEX49A0A1B0GTD5 131 aa9.56□□□□□ -0.88
SMARCA4-217ENST00000591595 RPL35AP18077 110 aaKnown RBP9.56□□□□□ -0.88
SMARCA4-217ENST00000591595 PLA2G2CQ5R387 149 aa9.56□□□□□ -0.88
SMARCA4-217ENST00000591595 DEFB124Q8NES8 71 aa9.56□□□□□ -0.88
SMARCA4-217ENST00000591595 CCL17Q92583 94 aa9.56□□□□□ -0.88
SMARCA4-217ENST00000591595 ZNF714Q96N38 554 aa9.56□□□□□ -0.88
SMARCA4-217ENST00000591595 NDUFA4L2Q9NRX3 87 aa9.56□□□□□ -0.88
SMARCA4-217ENST00000591595 K7EM74 188 aa9.55□□□□□ -0.88
SMARCA4-217ENST00000591595 CEMP1Q6PRD7 247 aaPredicted RBP9.55□□□□□ -0.88
SMARCA4-217ENST00000591595 IGLV3-9A0A075B6K5 115 aa9.55□□□□□ -0.88
SMARCA4-217ENST00000591595 WT1-ASQ06250 92 aa9.55□□□□□ -0.88
SMARCA4-217ENST00000591595 POM121L12Q8N7R1 296 aa9.55□□□□□ -0.88
SMARCA4-217ENST00000591595 PKIGQ9Y2B9 76 aa9.55□□□□□ -0.88
SMARCA4-217ENST00000591595 CRIP2P52943 208 aaPredicted RBP9.55□□□□□ -0.88
SMARCA4-217ENST00000591595 AMN1Q8IY45 258 aa9.55□□□□□ -0.88
SMARCA4-217ENST00000591595 ORMDL3Q8N138 153 aa9.55□□□□□ -0.88
SMARCA4-217ENST00000591595 DPH3Q96FX2 82 aa9.55□□□□□ -0.88
SMARCA4-217ENST00000591595 MBD3L2Q8NHZ7 208 aaPredicted RBP9.54□□□□□ -0.88
SMARCA4-217ENST00000591595 JPT2Q9H910 190 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms