RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 OR11H4Q8NGC9 324 aa7.27□□□□□ -1.25
VPS4B-207ENST00000591519 OR2G3Q8NGZ4 309 aa7.27□□□□□ -1.25
VPS4B-207ENST00000591519 RNASE8Q8TDE3 154 aaKnown RBP7.27□□□□□ -1.25
VPS4B-207ENST00000591519 C16orf74Q96GX8 76 aa7.27□□□□□ -1.25
VPS4B-207ENST00000591519 ATG101Q9BSB4 218 aa7.27□□□□□ -1.25
VPS4B-207ENST00000591519 AAMDCQ9H7C9 122 aa7.27□□□□□ -1.25
VPS4B-207ENST00000591519 DYNC1H1Q14204 4646 aaKnown RBP7.27□□□□□ -1.25
VPS4B-207ENST00000591519 NBDYA0A0U1RRE5 68 aa7.26□□□□□ -1.25
VPS4B-207ENST00000591519 H7BYZ3 331 aa7.26□□□□□ -1.25
VPS4B-207ENST00000591519 CDC34P49427 236 aaPredicted RBP7.26□□□□□ -1.25
VPS4B-207ENST00000591519 CCL18P55774 89 aa7.26□□□□□ -1.25
VPS4B-207ENST00000591519 RANP62826 216 aaKnown RBP7.26□□□□□ -1.25
VPS4B-207ENST00000591519 KIR3DS1Q14943 382 aa7.26□□□□□ -1.25
VPS4B-207ENST00000591519 Q6ZNX1 250 aa7.26□□□□□ -1.25
VPS4B-207ENST00000591519 ZNF575Q86XF7 245 aa7.26□□□□□ -1.25
VPS4B-207ENST00000591519 TMEM263Q8WUH6 116 aaKnown RBP7.26□□□□□ -1.25
VPS4B-207ENST00000591519 HYLS1Q96M11 299 aa7.26□□□□□ -1.25
VPS4B-207ENST00000591519 RPH3ALQ9UNE2 315 aa7.26□□□□□ -1.25
VPS4B-207ENST00000591519 LINC00588Q9Y4M8 146 aa7.26□□□□□ -1.25
VPS4B-207ENST00000591519 IGKV2-40A0A087WW87 121 aaPredicted RBP7.25□□□□□ -1.25
VPS4B-207ENST00000591519 ZNF253O75346 499 aa7.25□□□□□ -1.25
VPS4B-207ENST00000591519 NUDT3O95989 172 aa7.25□□□□□ -1.25
VPS4B-207ENST00000591519 IGKV2D-40P01614 121 aaPredicted RBP7.25□□□□□ -1.25
VPS4B-207ENST00000591519 ARL14EPLP0DKL9 152 aa7.25□□□□□ -1.25
VPS4B-207ENST00000591519 CT45A10P0DMU9 189 aa7.25□□□□□ -1.25
VPS4B-207ENST00000591519 HTN1P15515 57 aa7.25□□□□□ -1.25
VPS4B-207ENST00000591519 PDE6HQ13956 83 aa7.25□□□□□ -1.25
VPS4B-207ENST00000591519 IQCF2Q8IXL9 164 aa7.25□□□□□ -1.25
VPS4B-207ENST00000591519 C6orf223Q8N319 242 aa7.25□□□□□ -1.25
VPS4B-207ENST00000591519 RAB24Q969Q5 203 aa7.25□□□□□ -1.25
VPS4B-207ENST00000591519 PSMG3Q9BT73 122 aaPredicted RBP7.25□□□□□ -1.25
VPS4B-207ENST00000591519 Q9H3A6 140 aa7.25□□□□□ -1.25
VPS4B-207ENST00000591519 NOP10Q9NPE3 64 aaKnown RBP7.25□□□□□ -1.25
VPS4B-207ENST00000591519 CYTL1Q9NRR1 136 aa7.25□□□□□ -1.25
VPS4B-207ENST00000591519 KANTRA0A1W2PQU2 76 aa7.24□□□□□ -1.25
VPS4B-207ENST00000591519 H3BNG1 76 aa7.24□□□□□ -1.25
VPS4B-207ENST00000591519 TAAR5O14804 337 aa7.24□□□□□ -1.25
VPS4B-207ENST00000591519 SSX7Q7RTT5 188 aa7.24□□□□□ -1.25
VPS4B-207ENST00000591519 KCNRGQ8N5I3 272 aa7.24□□□□□ -1.25
VPS4B-207ENST00000591519 GNPNAT1Q96EK6 184 aaPredicted RBP7.24□□□□□ -1.25
VPS4B-207ENST00000591519 ST6GAL2Q96JF0 529 aa7.24□□□□□ -1.25
VPS4B-207ENST00000591519 ARPC5LQ9BPX5 153 aa7.24□□□□□ -1.25
VPS4B-207ENST00000591519 ACTR3CQ9C0K3 210 aaPredicted RBP7.24□□□□□ -1.25
VPS4B-207ENST00000591519 PRELID1Q9Y255 219 aa7.24□□□□□ -1.25
VPS4B-207ENST00000591519 RYR1P21817 5038 aa7.23□□□□□ -1.25
VPS4B-207ENST00000591519 PGPA6NDG6 321 aa7.23□□□□□ -1.25
VPS4B-207ENST00000591519 PFDN1O60925 122 aa7.23□□□□□ -1.25
VPS4B-207ENST00000591519 CDK2AP2O75956 126 aa7.23□□□□□ -1.25
VPS4B-207ENST00000591519 MBP02144 154 aa7.23□□□□□ -1.25
VPS4B-207ENST00000591519 GCHFRP30047 84 aa7.23□□□□□ -1.25
VPS4B-207ENST00000591519 CSN1S1P47710 185 aa7.23□□□□□ -1.25
VPS4B-207ENST00000591519 FGF8P55075 233 aaPredicted RBP7.23□□□□□ -1.25
VPS4B-207ENST00000591519 SERF2P84101 59 aa7.23□□□□□ -1.25
VPS4B-207ENST00000591519 AKR1C8PQ5T2L2 129 aa7.23□□□□□ -1.25
VPS4B-207ENST00000591519 GFI1BQ5VTD9 330 aa7.23□□□□□ -1.25
VPS4B-207ENST00000591519 PQLC2Q6ZP29 291 aa7.23□□□□□ -1.25
VPS4B-207ENST00000591519 CCDC28AQ8IWP9 274 aa7.23□□□□□ -1.25
VPS4B-207ENST00000591519 RXFP4Q8TDU9 374 aa7.23□□□□□ -1.25
VPS4B-207ENST00000591519 MRPL53Q96EL3 112 aaKnown RBP7.23□□□□□ -1.25
VPS4B-207ENST00000591519 ODF3Q96PU9 254 aa7.23□□□□□ -1.25
VPS4B-207ENST00000591519 VGLL1Q99990 258 aa7.23□□□□□ -1.25
VPS4B-207ENST00000591519 ZNF471Q9BX82 626 aaPredicted RBP7.23□□□□□ -1.25
VPS4B-207ENST00000591519 AGPAT4-IT1Q9H0P7 198 aa7.23□□□□□ -1.25
VPS4B-207ENST00000591519 Q9H8V8 135 aa7.23□□□□□ -1.25
VPS4B-207ENST00000591519 TRAV12-3A0A0B4J271 114 aa7.22□□□□□ -1.25
VPS4B-207ENST00000591519 A0A0D9SG52 128 aa7.22□□□□□ -1.25
VPS4B-207ENST00000591519 A0A1B0GVG6 124 aa7.22□□□□□ -1.25
VPS4B-207ENST00000591519 HMSDA8MTL9 139 aa7.22□□□□□ -1.25
VPS4B-207ENST00000591519 BCL2L11O43521 198 aa7.22□□□□□ -1.25
VPS4B-207ENST00000591519 STAG3L2P0CL84 134 aa7.22□□□□□ -1.25
VPS4B-207ENST00000591519 STAG3L3P0CL85 134 aa7.22□□□□□ -1.25
VPS4B-207ENST00000591519 BTF3P20290 206 aaKnown RBP7.22□□□□□ -1.25
VPS4B-207ENST00000591519 LEPP41159 167 aa7.22□□□□□ -1.25
VPS4B-207ENST00000591519 DAZ2Q13117 558 aaKnown RBP7.22□□□□□ -1.25
VPS4B-207ENST00000591519 ZNF726P1Q15940 193 aa7.22□□□□□ -1.25
VPS4B-207ENST00000591519 TMEM78Q5T7P6 136 aa7.22□□□□□ -1.25
VPS4B-207ENST00000591519 TMUB2Q71RG4 321 aa7.22□□□□□ -1.25
VPS4B-207ENST00000591519 Q8TAT8 98 aa7.22□□□□□ -1.25
VPS4B-207ENST00000591519 UPK3BQ9BT76 320 aa7.22□□□□□ -1.25
VPS4B-207ENST00000591519 TRAV26-1A0A087WT03 109 aa7.21□□□□□ -1.26
VPS4B-207ENST00000591519 C16orf90A8MZG2 172 aa7.21□□□□□ -1.26
VPS4B-207ENST00000591519 CXorf1O96002 111 aa7.21□□□□□ -1.26
VPS4B-207ENST00000591519 SLC25A5P05141 298 aaKnown RBP7.21□□□□□ -1.26
VPS4B-207ENST00000591519 RNASE4P34096 147 aaKnown RBP7.21□□□□□ -1.26
VPS4B-207ENST00000591519 GNG5P63218 68 aa7.21□□□□□ -1.26
VPS4B-207ENST00000591519 CD300CQ08708 224 aa7.21□□□□□ -1.26
VPS4B-207ENST00000591519 BTN1A1Q13410 526 aa7.21□□□□□ -1.26
VPS4B-207ENST00000591519 OR5I1Q13606 314 aa7.21□□□□□ -1.26
VPS4B-207ENST00000591519 ZNF345Q14585 488 aa7.21□□□□□ -1.26
VPS4B-207ENST00000591519 AKAP14Q86UN6 197 aa7.21□□□□□ -1.26
VPS4B-207ENST00000591519 CMTM2Q8TAZ6 248 aa7.21□□□□□ -1.26
VPS4B-207ENST00000591519 C18orf15Q96N68 181 aa7.21□□□□□ -1.26
VPS4B-207ENST00000591519 PYGO2Q9BRQ0 406 aa7.21□□□□□ -1.26
VPS4B-207ENST00000591519 TMPRSS5Q9H3S3 457 aa7.21□□□□□ -1.26
VPS4B-207ENST00000591519 OTORQ9NRC9 128 aa7.21□□□□□ -1.26
VPS4B-207ENST00000591519 CTXND1A0A1B0GTU2 59 aa7.2□□□□□ -1.26
VPS4B-207ENST00000591519 A0A1B0GV50 99 aa7.2□□□□□ -1.26
VPS4B-207ENST00000591519 A0A1W2PPQ1 181 aa7.2□□□□□ -1.26
VPS4B-207ENST00000591519 DIRC3C9JPN6 131 aa7.2□□□□□ -1.26
VPS4B-207ENST00000591519 FHITP49789 147 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms