RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 FHITP49789 147 aa8.48□□□□□ -1.05
LIG3-213ENST00000590630 FGF8P55075 233 aaPredicted RBP8.48□□□□□ -1.05
LIG3-213ENST00000590630 SUMO1P63165 101 aaKnown RBP8.48□□□□□ -1.05
LIG3-213ENST00000590630 GNG5P63218 68 aa8.48□□□□□ -1.05
LIG3-213ENST00000590630 PRR9Q5T870 116 aa8.48□□□□□ -1.05
LIG3-213ENST00000590630 EIF5AL1Q6IS14 154 aaKnown RBP8.48□□□□□ -1.05
LIG3-213ENST00000590630 LINC00467Q9BRT7 94 aa8.48□□□□□ -1.05
LIG3-213ENST00000590630 DAD1P61803 113 aa8.47□□□□□ -1.05
LIG3-213ENST00000590630 ZNF680Q8NEM1 530 aa8.47□□□□□ -1.05
LIG3-213ENST00000590630 FAM213BQ8TBF2 198 aa8.47□□□□□ -1.05
LIG3-213ENST00000590630 ATG101Q9BSB4 218 aa8.47□□□□□ -1.05
LIG3-213ENST00000590630 TMPRSS5Q9H3S3 457 aa8.47□□□□□ -1.05
LIG3-213ENST00000590630 EPDR1Q9UM22 224 aa8.47□□□□□ -1.05
LIG3-213ENST00000590630 RYR3Q15413 4870 aa8.47□□□□□ -1.05
LIG3-213ENST00000590630 SACSQ9NZJ4 4579 aa8.46□□□□□ -1.05
LIG3-213ENST00000590630 TRAV8-1A0A0A6YYK1 113 aa8.46□□□□□ -1.06
LIG3-213ENST00000590630 FBLL1A6NHQ2 334 aaKnown RBP8.46□□□□□ -1.06
LIG3-213ENST00000590630 FAM74A7A6NL05 159 aa8.46□□□□□ -1.06
LIG3-213ENST00000590630 IGLL5B9A064 214 aa8.46□□□□□ -1.06
LIG3-213ENST00000590630 UBE2G2P60604 165 aa8.46□□□□□ -1.06
LIG3-213ENST00000590630 ANXA2RQ3ZCQ2 193 aa8.46□□□□□ -1.06
LIG3-213ENST00000590630 Q6AWC8 147 aa8.46□□□□□ -1.06
LIG3-213ENST00000590630 EIF4E3Q8N5X7 224 aaKnown RBP8.46□□□□□ -1.06
LIG3-213ENST00000590630 CYB561D1Q8N8Q1 229 aa8.46□□□□□ -1.06
LIG3-213ENST00000590630 SFT2D1Q8WV19 159 aa8.46□□□□□ -1.06
LIG3-213ENST00000590630 MBD3L1Q8WWY6 194 aa8.46□□□□□ -1.06
LIG3-213ENST00000590630 NDFIP1Q9BT67 221 aa8.46□□□□□ -1.06
LIG3-213ENST00000590630 PLA2G2EQ9NZK7 142 aa8.46□□□□□ -1.06
LIG3-213ENST00000590630 ARL2-SNX15V9GYD0 113 aa8.46□□□□□ -1.06
LIG3-213ENST00000590630 CBY3A6NI87 242 aa8.45□□□□□ -1.06
LIG3-213ENST00000590630 SNURFLB1AK76 121 aa8.45□□□□□ -1.06
LIG3-213ENST00000590630 IFNA7P01567 189 aa8.45□□□□□ -1.06
LIG3-213ENST00000590630 DEFB130BP0DP73 79 aa8.45□□□□□ -1.06
LIG3-213ENST00000590630 DEFB130AP0DP74 79 aa8.45□□□□□ -1.06
LIG3-213ENST00000590630 RAB5CP51148 216 aa8.45□□□□□ -1.06
LIG3-213ENST00000590630 DAZ2Q13117 558 aaKnown RBP8.45□□□□□ -1.06
LIG3-213ENST00000590630 ZFP69Q49AA0 526 aa8.45□□□□□ -1.06
LIG3-213ENST00000590630 SLC51BQ86UW2 128 aa8.45□□□□□ -1.06
LIG3-213ENST00000590630 TMEM75Q8N9X5 138 aa8.45□□□□□ -1.06
LIG3-213ENST00000590630 LINC00476Q8WZB0 136 aa8.45□□□□□ -1.06
LIG3-213ENST00000590630 FAM210BQ96KR6 192 aa8.45□□□□□ -1.06
LIG3-213ENST00000590630 TCEAL7Q9BRU2 100 aa8.45□□□□□ -1.06
LIG3-213ENST00000590630 TREM1Q9NP99 234 aa8.45□□□□□ -1.06
LIG3-213ENST00000590630 NOP10Q9NPE3 64 aaKnown RBP8.45□□□□□ -1.06
LIG3-213ENST00000590630 ALMS1Q8TCU4 4167 aa8.44□□□□□ -1.06
LIG3-213ENST00000590630 IGHV4-4A0A075B6R2 117 aa8.44□□□□□ -1.06
LIG3-213ENST00000590630 IGHV1OR15-1A0A075B7D0 117 aa8.44□□□□□ -1.06
LIG3-213ENST00000590630 IGLV2-11P01706 119 aa8.44□□□□□ -1.06
LIG3-213ENST00000590630 H2AFB1P0C5Y9 115 aa8.44□□□□□ -1.06
LIG3-213ENST00000590630 IBA57Q5T440 356 aaKnown RBP8.44□□□□□ -1.06
LIG3-213ENST00000590630 C9orf62Q8N4C0 152 aa8.44□□□□□ -1.06
LIG3-213ENST00000590630 C11orf72Q8NBR9 251 aa8.44□□□□□ -1.06
LIG3-213ENST00000590630 HIST1H2BAQ96A08 127 aa8.44□□□□□ -1.06
LIG3-213ENST00000590630 TVP23CQ96ET8 276 aa8.44□□□□□ -1.06
LIG3-213ENST00000590630 RYR2Q92736 4967 aa8.43□□□□□ -1.06
LIG3-213ENST00000590630 DNAH1Q9P2D7 4330 aa8.43□□□□□ -1.06
LIG3-213ENST00000590630 PEX7O00628 323 aa8.43□□□□□ -1.06
LIG3-213ENST00000590630 HTN3P15516 51 aa8.43□□□□□ -1.06
LIG3-213ENST00000590630 PPT1P50897 306 aa8.43□□□□□ -1.06
LIG3-213ENST00000590630 FLI1Q01543 452 aaPredicted RBP8.43□□□□□ -1.06
LIG3-213ENST00000590630 Q6ZQT7 251 aa8.43□□□□□ -1.06
LIG3-213ENST00000590630 LINC00612Q8N6U2 182 aa8.43□□□□□ -1.06
LIG3-213ENST00000590630 SGK494Q96LW2 274 aa8.43□□□□□ -1.06
LIG3-213ENST00000590630 NDUFAF3Q9BU61 184 aa8.43□□□□□ -1.06
LIG3-213ENST00000590630 GSN-AS1Q9NRJ2 163 aa8.43□□□□□ -1.06
LIG3-213ENST00000590630 APLNQ9ULZ1 77 aa8.43□□□□□ -1.06
LIG3-213ENST00000590630 PSG8Q9UQ74 426 aa8.43□□□□□ -1.06
LIG3-213ENST00000590630 TRAV21A0A0B4J279 112 aa8.42□□□□□ -1.06
LIG3-213ENST00000590630 F6UZH7 168 aa8.42□□□□□ -1.06
LIG3-213ENST00000590630 LY6G6CO95867 125 aa8.42□□□□□ -1.06
LIG3-213ENST00000590630 ATP5G1P05496 136 aa8.42□□□□□ -1.06
LIG3-213ENST00000590630 ATP5G3P48201 142 aa8.42□□□□□ -1.06
LIG3-213ENST00000590630 TCL1AP56279 114 aa8.42□□□□□ -1.06
LIG3-213ENST00000590630 TDRG1Q3Y452 100 aa8.42□□□□□ -1.06
LIG3-213ENST00000590630 SAPCD1Q5SSQ6 148 aa8.42□□□□□ -1.06
LIG3-213ENST00000590630 CST9LP1Q5W188 147 aa8.42□□□□□ -1.06
LIG3-213ENST00000590630 LGALS9CQ6DKI2 356 aa8.42□□□□□ -1.06
LIG3-213ENST00000590630 FAM159AQ6UWV7 190 aa8.42□□□□□ -1.06
LIG3-213ENST00000590630 PRNTQ86SH4 94 aa8.42□□□□□ -1.06
LIG3-213ENST00000590630 MUC4Q99102 2169 aa8.41□□□□□ -1.06
LIG3-213ENST00000590630 TRAV1-1A0A0B4J248 108 aa8.41□□□□□ -1.06
LIG3-213ENST00000590630 A0A1B0GV50 99 aa8.41□□□□□ -1.06
LIG3-213ENST00000590630 TEX46H3BTG2 121 aa8.41□□□□□ -1.06
LIG3-213ENST00000590630 PAGE4O60829 102 aa8.41□□□□□ -1.06
LIG3-213ENST00000590630 SULT1A2P50226 295 aa8.41□□□□□ -1.06
LIG3-213ENST00000590630 ZNF415Q09FC8 603 aa8.41□□□□□ -1.06
LIG3-213ENST00000590630 SMUG1Q53HV7 270 aa8.41□□□□□ -1.06
LIG3-213ENST00000590630 MUC21Q5SSG8 566 aa8.41□□□□□ -1.06
LIG3-213ENST00000590630 LINC00479Q96M42 142 aa8.41□□□□□ -1.06
LIG3-213ENST00000590630 TP53TG3Q9ULZ0 132 aa8.41□□□□□ -1.06
LIG3-213ENST00000590630 HYDINQ4G0P3 5121 aa8.41□□□□□ -1.06
LIG3-213ENST00000590630 TRGV11A0A075B6L2 103 aa8.4□□□□□ -1.06
LIG3-213ENST00000590630 TRAV34A0A0B4J273 112 aa8.4□□□□□ -1.06
LIG3-213ENST00000590630 GAGE12BA1L429 117 aa8.4□□□□□ -1.06
LIG3-213ENST00000590630 GAGE7O76087 117 aa8.4□□□□□ -1.06
LIG3-213ENST00000590630 PFN1P07737 140 aaKnown RBP8.4□□□□□ -1.06
LIG3-213ENST00000590630 GAGE12FP0CL80 117 aa8.4□□□□□ -1.06
LIG3-213ENST00000590630 GAGE12GP0CL81 117 aa8.4□□□□□ -1.06
LIG3-213ENST00000590630 GAGE12IP0CL82 117 aa8.4□□□□□ -1.06
LIG3-213ENST00000590630 LGALS9BQ3B8N2 356 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms