RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 SMIM12Q96EX1 92 aa12.16□□□□□ -0.46
GCDH-213ENST00000590627 TRBV20OR9-2A0A075B6H5 130 aa12.15□□□□□ -0.46
GCDH-213ENST00000590627 ZNF727A8MUV8 499 aa12.15□□□□□ -0.46
GCDH-213ENST00000590627 CEBPGP53567 150 aa12.15□□□□□ -0.46
GCDH-213ENST00000590627 CENPWQ5EE01 88 aa12.15□□□□□ -0.46
GCDH-213ENST00000590627 BAGE2Q86Y30 109 aa12.15□□□□□ -0.46
GCDH-213ENST00000590627 TMEM183AQ8IXX5 376 aa12.15□□□□□ -0.46
GCDH-213ENST00000590627 SLC7A5P1Q8MH63 180 aa12.15□□□□□ -0.46
GCDH-213ENST00000590627 SMIM7Q9BQ49 75 aa12.15□□□□□ -0.46
GCDH-213ENST00000590627 NDFIP1Q9BT67 221 aa12.15□□□□□ -0.46
GCDH-213ENST00000590627 MLST8Q9BVC4 326 aa12.15□□□□□ -0.46
GCDH-213ENST00000590627 AGRNO00468 2067 aa12.15□□□□□ -0.46
GCDH-213ENST00000590627 IGKV3-20P01619 116 aa12.14□□□□□ -0.47
GCDH-213ENST00000590627 TSPOP30536 169 aa12.14□□□□□ -0.47
GCDH-213ENST00000590627 LEPP41159 167 aa12.14□□□□□ -0.47
GCDH-213ENST00000590627 GNG4P50150 75 aa12.14□□□□□ -0.47
GCDH-213ENST00000590627 ZNF674Q2M3X9 581 aa12.14□□□□□ -0.47
GCDH-213ENST00000590627 ZFAND6Q6FIF0 208 aa12.14□□□□□ -0.47
GCDH-213ENST00000590627 MORN3Q6PF18 240 aaPredicted RBP12.14□□□□□ -0.47
GCDH-213ENST00000590627 ZFAND2AQ8N6M9 145 aa12.14□□□□□ -0.47
GCDH-213ENST00000590627 SPATA25Q9BR10 227 aa12.14□□□□□ -0.47
GCDH-213ENST00000590627 TUBA4BQ9H853 241 aa12.14□□□□□ -0.47
GCDH-213ENST00000590627 LY96Q9Y6Y9 160 aa12.14□□□□□ -0.47
GCDH-213ENST00000590627 BIRC6Q9NR09 4857 aa12.13□□□□□ -0.47
GCDH-213ENST00000590627 KLLNB2CW77 178 aa12.13□□□□□ -0.47
GCDH-213ENST00000590627 IGLV2-8P01709 118 aa12.13□□□□□ -0.47
GCDH-213ENST00000590627 AMBPP02760 352 aa12.13□□□□□ -0.47
GCDH-213ENST00000590627 NUTF2P61970 127 aaKnown RBP12.13□□□□□ -0.47
GCDH-213ENST00000590627 LINC00322Q6ZN03 302 aaPredicted RBP12.13□□□□□ -0.47
GCDH-213ENST00000590627 LOC102724200A0A096LPH7 203 aaPredicted RBP12.12□□□□□ -0.47
GCDH-213ENST00000590627 KIR2DL5BA0A0G2JN68 375 aa12.12□□□□□ -0.47
GCDH-213ENST00000590627 KIR2DL5BA0A0G2JPC4 375 aa12.12□□□□□ -0.47
GCDH-213ENST00000590627 CDKN1BP46527 198 aa12.12□□□□□ -0.47
GCDH-213ENST00000590627 KIR2DL5AQ8N109 375 aa12.12□□□□□ -0.47
GCDH-213ENST00000590627 KIR2DL5BQ8NHK3 375 aa12.12□□□□□ -0.47
GCDH-213ENST00000590627 GIG44P09565 113 aaPredicted RBP12.11□□□□□ -0.47
GCDH-213ENST00000590627 RPL35AP18077 110 aaKnown RBP12.11□□□□□ -0.47
GCDH-213ENST00000590627 SPINK13Q1W4C9 94 aa12.11□□□□□ -0.47
GCDH-213ENST00000590627 TMEM241Q24JQ0 296 aa12.11□□□□□ -0.47
GCDH-213ENST00000590627 SMUG1Q53HV7 270 aa12.11□□□□□ -0.47
GCDH-213ENST00000590627 C10orf91Q5T1B1 145 aa12.11□□□□□ -0.47
GCDH-213ENST00000590627 C8orf49Q96NF6 230 aa12.11□□□□□ -0.47
GCDH-213ENST00000590627 SEC11CQ9BY50 192 aa12.11□□□□□ -0.47
GCDH-213ENST00000590627 CSTL1Q9H114 145 aa12.11□□□□□ -0.47
GCDH-213ENST00000590627 NAT8Q9UHE5 227 aa12.11□□□□□ -0.47
GCDH-213ENST00000590627 M0R2Z0 102 aa12.1□□□□□ -0.47
GCDH-213ENST00000590627 CRXO43186 299 aaPredicted RBP12.1□□□□□ -0.47
GCDH-213ENST00000590627 GPX1P07203 203 aa12.1□□□□□ -0.47
GCDH-213ENST00000590627 ADCYAP1P18509 176 aa12.1□□□□□ -0.47
GCDH-213ENST00000590627 OCC1Q8TAD7 63 aa12.1□□□□□ -0.47
GCDH-213ENST00000590627 PGPEP1LA6NFU8 196 aa12.09□□□□□ -0.47
GCDH-213ENST00000590627 F8W036 122 aa12.09□□□□□ -0.47
GCDH-213ENST00000590627 APOC4P55056 127 aa12.09□□□□□ -0.47
GCDH-213ENST00000590627 PRR9Q5T870 116 aa12.09□□□□□ -0.47
GCDH-213ENST00000590627 Q6AWC8 147 aa12.09□□□□□ -0.47
GCDH-213ENST00000590627 LINC01551Q86U37 167 aa12.09□□□□□ -0.47
GCDH-213ENST00000590627 ZC2HC1AQ96GY0 325 aa12.09□□□□□ -0.47
GCDH-213ENST00000590627 NIPSNAP3BQ9BS92 247 aa12.09□□□□□ -0.47
GCDH-213ENST00000590627 C1QTNF4Q9BXJ3 329 aa12.09□□□□□ -0.47
GCDH-213ENST00000590627 SDF2L1Q9HCN8 221 aa12.09□□□□□ -0.47
GCDH-213ENST00000590627 BIN3Q9NQY0 253 aa12.09□□□□□ -0.47
GCDH-213ENST00000590627 HYDINQ4G0P3 5121 aa12.08□□□□□ -0.48
GCDH-213ENST00000590627 C7orf71A4D174 169 aa12.08□□□□□ -0.48
GCDH-213ENST00000590627 KRBOX1C9JBD0 128 aa12.08□□□□□ -0.48
GCDH-213ENST00000590627 GCGP01275 180 aa12.08□□□□□ -0.48
GCDH-213ENST00000590627 FXYD7P58549 80 aa12.08□□□□□ -0.48
GCDH-213ENST00000590627 KIR3DS1Q14943 382 aa12.08□□□□□ -0.48
GCDH-213ENST00000590627 GFI1BQ5VTD9 330 aa12.08□□□□□ -0.48
GCDH-213ENST00000590627 NHLRC2Q8NBF2 726 aa12.08□□□□□ -0.48
GCDH-213ENST00000590627 C20orf144Q9BQM9 153 aa12.08□□□□□ -0.48
GCDH-213ENST00000590627 CARHSP1Q9Y2V2 147 aaKnown RBP12.08□□□□□ -0.48
GCDH-213ENST00000590627 TRAV12-2A0A075B6T6 113 aa12.07□□□□□ -0.48
GCDH-213ENST00000590627 K7EN84 100 aa12.07□□□□□ -0.48
GCDH-213ENST00000590627 UBE2CO00762 179 aa12.07□□□□□ -0.48
GCDH-213ENST00000590627 ZNF324O75467 553 aaPredicted RBP12.07□□□□□ -0.48
GCDH-213ENST00000590627 PFN1P07737 140 aaKnown RBP12.07□□□□□ -0.48
GCDH-213ENST00000590627 RNASE4P34096 147 aaKnown RBP12.07□□□□□ -0.48
GCDH-213ENST00000590627 CRIP1P50238 77 aa12.07□□□□□ -0.48
GCDH-213ENST00000590627 ZNF80P51504 273 aaPredicted RBP12.07□□□□□ -0.48
GCDH-213ENST00000590627 RPL23P62829 140 aaKnown RBP12.07□□□□□ -0.48
GCDH-213ENST00000590627 FAM162BQ5T6X4 162 aa12.07□□□□□ -0.48
GCDH-213ENST00000590627 CSNK1G2-AS1Q8NCQ2 148 aa12.07□□□□□ -0.48
GCDH-213ENST00000590627 XCL2Q9UBD3 114 aa12.07□□□□□ -0.48
GCDH-213ENST00000590627 CA1P00915 261 aaPredicted RBP12.06□□□□□ -0.48
GCDH-213ENST00000590627 INSP01308 110 aa12.06□□□□□ -0.48
GCDH-213ENST00000590627 MGST1P10620 155 aaKnown RBP12.06□□□□□ -0.48
GCDH-213ENST00000590627 PNRC1Q12796 327 aaPredicted RBP12.06□□□□□ -0.48
GCDH-213ENST00000590627 BTN1A1Q13410 526 aa12.06□□□□□ -0.48
GCDH-213ENST00000590627 TRAV21A0A0B4J279 112 aa12.05□□□□□ -0.48
GCDH-213ENST00000590627 FABP5P3A8MUU1 101 aa12.05□□□□□ -0.48
GCDH-213ENST00000590627 J3KRW8 73 aa12.05□□□□□ -0.48
GCDH-213ENST00000590627 IL17DQ8TAD2 202 aa12.05□□□□□ -0.48
GCDH-213ENST00000590627 PLECQ15149 4684 aaKnown RBP12.04□□□□□ -0.48
GCDH-213ENST00000590627 TRAV12-3A0A0B4J271 114 aa12.04□□□□□ -0.48
GCDH-213ENST00000590627 C19orf71A6NCJ1 209 aa12.04□□□□□ -0.48
GCDH-213ENST00000590627 SH2D1AO60880 128 aa12.04□□□□□ -0.48
GCDH-213ENST00000590627 OR5I1Q13606 314 aa12.04□□□□□ -0.48
GCDH-213ENST00000590627 TMEM256Q8N2U0 113 aa12.04□□□□□ -0.48
GCDH-213ENST00000590627 ISOC2Q96AB3 205 aa12.04□□□□□ -0.48
GCDH-213ENST00000590627 RBMY1A1P0DJD3 496 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms