RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 STAG3L2P0CL84 134 aa12.63□□□□□ -0.39
CIRBP-227ENST00000590188 STAG3L3P0CL85 134 aa12.63□□□□□ -0.39
CIRBP-227ENST00000590188 HOXA5P20719 270 aa12.63□□□□□ -0.39
CIRBP-227ENST00000590188 FAM74A1Q5RGS3 127 aa12.63□□□□□ -0.39
CIRBP-227ENST00000590188 ARPC5LQ9BPX5 153 aa12.63□□□□□ -0.39
CIRBP-227ENST00000590188 ATG101Q9BSB4 218 aa12.63□□□□□ -0.39
CIRBP-227ENST00000590188 TMPRSS5Q9H3S3 457 aa12.63□□□□□ -0.39
CIRBP-227ENST00000590188 TRAV26-1A0A087WT03 109 aa12.62□□□□□ -0.39
CIRBP-227ENST00000590188 BORCS7-ASMTA0A0B4J1R7 106 aa12.62□□□□□ -0.39
CIRBP-227ENST00000590188 DAZ2Q13117 558 aaKnown RBP12.62□□□□□ -0.39
CIRBP-227ENST00000590188 ANXA2RQ3ZCQ2 193 aa12.62□□□□□ -0.39
CIRBP-227ENST00000590188 SSX7Q7RTT5 188 aa12.62□□□□□ -0.39
CIRBP-227ENST00000590188 IQCF2Q8IXL9 164 aa12.62□□□□□ -0.39
CIRBP-227ENST00000590188 SGK494Q96LW2 274 aa12.62□□□□□ -0.39
CIRBP-227ENST00000590188 LINC00467Q9BRT7 94 aa12.62□□□□□ -0.39
CIRBP-227ENST00000590188 TRGV2A0A075B6R0 118 aa12.61□□□□□ -0.39
CIRBP-227ENST00000590188 TRAV8-1A0A0A6YYK1 113 aa12.61□□□□□ -0.39
CIRBP-227ENST00000590188 ARPC5O15511 151 aa12.61□□□□□ -0.39
CIRBP-227ENST00000590188 MBP02144 154 aa12.61□□□□□ -0.39
CIRBP-227ENST00000590188 GCHFRP30047 84 aa12.61□□□□□ -0.39
CIRBP-227ENST00000590188 MRPL16Q9NX20 251 aaKnown RBP12.61□□□□□ -0.39
CIRBP-227ENST00000590188 F6UZH7 168 aa12.6□□□□□ -0.39
CIRBP-227ENST00000590188 TCL1AP56279 114 aa12.6□□□□□ -0.39
CIRBP-227ENST00000590188 SERF2P84101 59 aa12.6□□□□□ -0.39
CIRBP-227ENST00000590188 RNF212Q495C1 297 aa12.6□□□□□ -0.39
CIRBP-227ENST00000590188 GNPNAT1Q96EK6 184 aaPredicted RBP12.6□□□□□ -0.39
CIRBP-227ENST00000590188 ACTR3CQ9C0K3 210 aaPredicted RBP12.6□□□□□ -0.39
CIRBP-227ENST00000590188 NAGKQ9UJ70 344 aa12.6□□□□□ -0.39
CIRBP-227ENST00000590188 DNAH17Q9UFH2 4485 aa12.59□□□□□ -0.39
CIRBP-227ENST00000590188 TRBV7-9A0A0J9YWB2 115 aa12.59□□□□□ -0.39
CIRBP-227ENST00000590188 IGHV3-53P01767 116 aa12.59□□□□□ -0.39
CIRBP-227ENST00000590188 SPINK4O60575 86 aa12.58□□□□□ -0.4
CIRBP-227ENST00000590188 IBA57Q5T440 356 aaKnown RBP12.58□□□□□ -0.4
CIRBP-227ENST00000590188 FAT2Q9NYQ8 4349 aa12.58□□□□□ -0.4
CIRBP-227ENST00000590188 NACAE9PAV3 2078 aa12.57□□□□□ -0.4
CIRBP-227ENST00000590188 CXorf1O96002 111 aa12.57□□□□□ -0.4
CIRBP-227ENST00000590188 ZNF415Q09FC8 603 aa12.57□□□□□ -0.4
CIRBP-227ENST00000590188 ZNF726P1Q15940 193 aa12.57□□□□□ -0.4
CIRBP-227ENST00000590188 TMEM183BQ1AE95 376 aa12.57□□□□□ -0.4
CIRBP-227ENST00000590188 Q6AWC8 147 aa12.57□□□□□ -0.4
CIRBP-227ENST00000590188 TMEM183AQ8IXX5 376 aa12.57□□□□□ -0.4
CIRBP-227ENST00000590188 TVP23CQ96ET8 276 aa12.57□□□□□ -0.4
CIRBP-227ENST00000590188 ST6GAL2Q96JF0 529 aa12.57□□□□□ -0.4
CIRBP-227ENST00000590188 TREM1Q9NP99 234 aa12.57□□□□□ -0.4
CIRBP-227ENST00000590188 MDFICQ9P1T7 246 aa12.57□□□□□ -0.4
CIRBP-227ENST00000590188 LENEPQ9Y5L5 61 aa12.57□□□□□ -0.4
CIRBP-227ENST00000590188 SUMO1P63165 101 aaKnown RBP12.56□□□□□ -0.4
CIRBP-227ENST00000590188 LGALS9BQ3B8N2 356 aa12.56□□□□□ -0.4
CIRBP-227ENST00000590188 FAM159AQ6UWV7 190 aa12.56□□□□□ -0.4
CIRBP-227ENST00000590188 TMED6Q8WW62 240 aa12.56□□□□□ -0.4
CIRBP-227ENST00000590188 CYTL1Q9NRR1 136 aa12.56□□□□□ -0.4
CIRBP-227ENST00000590188 TMEM167BQ9NRX6 74 aa12.56□□□□□ -0.4
CIRBP-227ENST00000590188 LINC00588Q9Y4M8 146 aa12.56□□□□□ -0.4
CIRBP-227ENST00000590188 GGTLC3B5MD39 225 aa12.55□□□□□ -0.4
CIRBP-227ENST00000590188 TCRAP04437 139 aa12.55□□□□□ -0.4
CIRBP-227ENST00000590188 FGF8P55075 233 aaPredicted RBP12.55□□□□□ -0.4
CIRBP-227ENST00000590188 CCL18P55774 89 aa12.55□□□□□ -0.4
CIRBP-227ENST00000590188 AKR1C8PQ5T2L2 129 aa12.55□□□□□ -0.4
CIRBP-227ENST00000590188 C5orf17Q8NAS9 161 aa12.55□□□□□ -0.4
CIRBP-227ENST00000590188 SUN5Q8TC36 379 aa12.55□□□□□ -0.4
CIRBP-227ENST00000590188 CTXND1A0A1B0GTU2 59 aa12.54□□□□□ -0.4
CIRBP-227ENST00000590188 RTL8CO15255 209 aa12.54□□□□□ -0.4
CIRBP-227ENST00000590188 UBE2G2P60604 165 aa12.54□□□□□ -0.4
CIRBP-227ENST00000590188 Q6ZR54 194 aa12.54□□□□□ -0.4
CIRBP-227ENST00000590188 C8orf49Q96NF6 230 aa12.54□□□□□ -0.4
CIRBP-227ENST00000590188 HECTD4Q9Y4D8 3996 aa12.54□□□□□ -0.4
CIRBP-227ENST00000590188 TRGV11A0A075B6L2 103 aa12.53□□□□□ -0.4
CIRBP-227ENST00000590188 TRAV21A0A0B4J279 112 aa12.53□□□□□ -0.4
CIRBP-227ENST00000590188 TAAR5O14804 337 aa12.53□□□□□ -0.4
CIRBP-227ENST00000590188 GNRH2O43555 120 aa12.53□□□□□ -0.4
CIRBP-227ENST00000590188 ARL6IP6Q8N6S5 226 aa12.53□□□□□ -0.4
CIRBP-227ENST00000590188 ZNRF2Q8NHG8 242 aa12.53□□□□□ -0.4
CIRBP-227ENST00000590188 VSIG2Q96IQ7 327 aa12.53□□□□□ -0.4
CIRBP-227ENST00000590188 NDFIP1Q9BT67 221 aa12.53□□□□□ -0.4
CIRBP-227ENST00000590188 EPDR1Q9UM22 224 aa12.53□□□□□ -0.4
CIRBP-227ENST00000590188 PRNTQ86SH4 94 aa12.52□□□□□ -0.41
CIRBP-227ENST00000590188 OR11H4Q8NGC9 324 aa12.52□□□□□ -0.41
CIRBP-227ENST00000590188 C18orf15Q96N68 181 aa12.52□□□□□ -0.41
CIRBP-227ENST00000590188 PSG8Q9UQ74 426 aa12.52□□□□□ -0.41
CIRBP-227ENST00000590188 SERTM2A0A1B0GWG4 89 aa12.51□□□□□ -0.41
CIRBP-227ENST00000590188 PRSS29PA6NIE9 313 aa12.51□□□□□ -0.41
CIRBP-227ENST00000590188 K7EQM0 130 aa12.51□□□□□ -0.41
CIRBP-227ENST00000590188 TYMSP04818 313 aa12.51□□□□□ -0.41
CIRBP-227ENST00000590188 SFTA3P0C7M3 94 aa12.51□□□□□ -0.41
CIRBP-227ENST00000590188 ZNF80P51504 273 aaPredicted RBP12.51□□□□□ -0.41
CIRBP-227ENST00000590188 FAM3BP58499 235 aaPredicted RBP12.51□□□□□ -0.41
CIRBP-227ENST00000590188 LINC00336Q6ZUF6 198 aa12.51□□□□□ -0.41
CIRBP-227ENST00000590188 TRAV34A0A0B4J273 112 aa12.5□□□□□ -0.41
CIRBP-227ENST00000590188 IFNA7P01567 189 aa12.5□□□□□ -0.41
CIRBP-227ENST00000590188 FLI1Q01543 452 aaPredicted RBP12.5□□□□□ -0.41
CIRBP-227ENST00000590188 ESRGQ1W209 222 aa12.5□□□□□ -0.41
CIRBP-227ENST00000590188 KCNRGQ8N5I3 272 aa12.5□□□□□ -0.41
CIRBP-227ENST00000590188 CYB561D1Q8N8Q1 229 aa12.5□□□□□ -0.41
CIRBP-227ENST00000590188 LINC00479Q96M42 142 aa12.5□□□□□ -0.41
CIRBP-227ENST00000590188 A0A096LPF7 62 aa12.49□□□□□ -0.41
CIRBP-227ENST00000590188 IGHV3-16A0A0C4DH30 117 aa12.49□□□□□ -0.41
CIRBP-227ENST00000590188 A0A1W2PRE2 83 aa12.49□□□□□ -0.41
CIRBP-227ENST00000590188 MAP1LC3B2A6NCE7 125 aa12.49□□□□□ -0.41
CIRBP-227ENST00000590188 PAX4O43316 350 aa12.49□□□□□ -0.41
CIRBP-227ENST00000590188 GCGP01275 180 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms