RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 TRGV2A0A075B6R0 118 aa8.49□□□□□ -1.05
TPM4-212ENST00000590180 TRGV1A0A0A0MS02 117 aa8.49□□□□□ -1.05
TPM4-212ENST00000590180 TAAR5O14804 337 aa8.49□□□□□ -1.05
TPM4-212ENST00000590180 GNG5P63218 68 aa8.49□□□□□ -1.05
TPM4-212ENST00000590180 RNF212Q495C1 297 aa8.49□□□□□ -1.05
TPM4-212ENST00000590180 MUC21Q5SSG8 566 aa8.49□□□□□ -1.05
TPM4-212ENST00000590180 Q6ZTI0 123 aa8.49□□□□□ -1.05
TPM4-212ENST00000590180 KLF12Q9Y4X4 402 aa8.49□□□□□ -1.05
TPM4-212ENST00000590180 IGLV2-18A0A075B6J9 118 aa8.48□□□□□ -1.05
TPM4-212ENST00000590180 A0A0J9YY99 117 aa8.48□□□□□ -1.05
TPM4-212ENST00000590180 G3V3Q6 166 aa8.48□□□□□ -1.05
TPM4-212ENST00000590180 CXorf1O96002 111 aa8.48□□□□□ -1.05
TPM4-212ENST00000590180 SUMO1P63165 101 aaKnown RBP8.48□□□□□ -1.05
TPM4-212ENST00000590180 AKR1C8PQ5T2L2 129 aa8.48□□□□□ -1.05
TPM4-212ENST00000590180 LINC00612Q8N6U2 182 aa8.48□□□□□ -1.05
TPM4-212ENST00000590180 C11orf72Q8NBR9 251 aa8.48□□□□□ -1.05
TPM4-212ENST00000590180 TMED6Q8WW62 240 aa8.48□□□□□ -1.05
TPM4-212ENST00000590180 ST6GAL2Q96JF0 529 aa8.48□□□□□ -1.05
TPM4-212ENST00000590180 SGK494Q96LW2 274 aa8.48□□□□□ -1.05
TPM4-212ENST00000590180 TMEM167BQ9NRX6 74 aa8.48□□□□□ -1.05
TPM4-212ENST00000590180 LENEPQ9Y5L5 61 aa8.48□□□□□ -1.05
TPM4-212ENST00000590180 TRAV26-1A0A087WT03 109 aa8.47□□□□□ -1.05
TPM4-212ENST00000590180 FAM159AQ6UWV7 190 aa8.47□□□□□ -1.05
TPM4-212ENST00000590180 ARL6IP6Q8N6S5 226 aa8.47□□□□□ -1.05
TPM4-212ENST00000590180 TREM1Q9NP99 234 aa8.47□□□□□ -1.05
TPM4-212ENST00000590180 VPS13DQ5THJ4 4388 aa8.47□□□□□ -1.05
TPM4-212ENST00000590180 TRAV8-1A0A0A6YYK1 113 aa8.46□□□□□ -1.06
TPM4-212ENST00000590180 K7EQM0 130 aa8.46□□□□□ -1.06
TPM4-212ENST00000590180 HOXA5P20719 270 aa8.46□□□□□ -1.06
TPM4-212ENST00000590180 CCL18P55774 89 aa8.46□□□□□ -1.06
TPM4-212ENST00000590180 TCL1AP56279 114 aa8.46□□□□□ -1.06
TPM4-212ENST00000590180 TMEM183BQ1AE95 376 aa8.46□□□□□ -1.06
TPM4-212ENST00000590180 IBA57Q5T440 356 aaKnown RBP8.46□□□□□ -1.06
TPM4-212ENST00000590180 SSX7Q7RTT5 188 aa8.46□□□□□ -1.06
TPM4-212ENST00000590180 TMEM183AQ8IXX5 376 aa8.46□□□□□ -1.06
TPM4-212ENST00000590180 SUN5Q8TC36 379 aa8.46□□□□□ -1.06
TPM4-212ENST00000590180 TMPRSS5Q9H3S3 457 aa8.46□□□□□ -1.06
TPM4-212ENST00000590180 CYTL1Q9NRR1 136 aa8.46□□□□□ -1.06
TPM4-212ENST00000590180 NAGKQ9UJ70 344 aa8.46□□□□□ -1.06
TPM4-212ENST00000590180 CTXND1A0A1B0GTU2 59 aa8.45□□□□□ -1.06
TPM4-212ENST00000590180 SPINK4O60575 86 aa8.45□□□□□ -1.06
TPM4-212ENST00000590180 TCRAP04437 139 aa8.45□□□□□ -1.06
TPM4-212ENST00000590180 FGF8P55075 233 aaPredicted RBP8.45□□□□□ -1.06
TPM4-212ENST00000590180 ZNF415Q09FC8 603 aa8.45□□□□□ -1.06
TPM4-212ENST00000590180 Q6AWC8 147 aa8.45□□□□□ -1.06
TPM4-212ENST00000590180 C5orf17Q8NAS9 161 aa8.45□□□□□ -1.06
TPM4-212ENST00000590180 TVP23CQ96ET8 276 aa8.45□□□□□ -1.06
TPM4-212ENST00000590180 NDFIP1Q9BT67 221 aa8.45□□□□□ -1.06
TPM4-212ENST00000590180 MRPL16Q9NX20 251 aaKnown RBP8.45□□□□□ -1.06
TPM4-212ENST00000590180 MDFICQ9P1T7 246 aa8.45□□□□□ -1.06
TPM4-212ENST00000590180 EPDR1Q9UM22 224 aa8.45□□□□□ -1.06
TPM4-212ENST00000590180 NACAE9PAV3 2078 aa8.45□□□□□ -1.06
TPM4-212ENST00000590180 TRGV11A0A075B6L2 103 aa8.44□□□□□ -1.06
TPM4-212ENST00000590180 TRAV21A0A0B4J279 112 aa8.44□□□□□ -1.06
TPM4-212ENST00000590180 SERTM2A0A1B0GWG4 89 aa8.44□□□□□ -1.06
TPM4-212ENST00000590180 F6UZH7 168 aa8.44□□□□□ -1.06
TPM4-212ENST00000590180 GNRH2O43555 120 aa8.44□□□□□ -1.06
TPM4-212ENST00000590180 IFNA7P01567 189 aa8.44□□□□□ -1.06
TPM4-212ENST00000590180 IGHV3-53P01767 116 aa8.44□□□□□ -1.06
TPM4-212ENST00000590180 UBE2G2P60604 165 aa8.44□□□□□ -1.06
TPM4-212ENST00000590180 ZNF726P1Q15940 193 aa8.44□□□□□ -1.06
TPM4-212ENST00000590180 LGALS9BQ3B8N2 356 aa8.44□□□□□ -1.06
TPM4-212ENST00000590180 KCNRGQ8N5I3 272 aa8.44□□□□□ -1.06
TPM4-212ENST00000590180 PSG8Q9UQ74 426 aa8.44□□□□□ -1.06
TPM4-212ENST00000590180 EPPK1P58107 5090 aaKnown RBP8.43□□□□□ -1.06
TPM4-212ENST00000590180 A0A1W2PRE2 83 aa8.43□□□□□ -1.06
TPM4-212ENST00000590180 FAM3BP58499 235 aaPredicted RBP8.43□□□□□ -1.06
TPM4-212ENST00000590180 PRNTQ86SH4 94 aa8.43□□□□□ -1.06
TPM4-212ENST00000590180 OR11H4Q8NGC9 324 aa8.43□□□□□ -1.06
TPM4-212ENST00000590180 MUC4Q99102 2169 aa8.42□□□□□ -1.06
TPM4-212ENST00000590180 A0A0D9SG52 128 aa8.42□□□□□ -1.06
TPM4-212ENST00000590180 HMSDA8MTL9 139 aa8.42□□□□□ -1.06
TPM4-212ENST00000590180 GGTLC3B5MD39 225 aa8.42□□□□□ -1.06
TPM4-212ENST00000590180 FLI1Q01543 452 aaPredicted RBP8.42□□□□□ -1.06
TPM4-212ENST00000590180 CYB561D1Q8N8Q1 229 aa8.42□□□□□ -1.06
TPM4-212ENST00000590180 STOML3Q8TAV4 291 aa8.42□□□□□ -1.06
TPM4-212ENST00000590180 C18orf15Q96N68 181 aa8.42□□□□□ -1.06
TPM4-212ENST00000590180 C8orf49Q96NF6 230 aa8.42□□□□□ -1.06
TPM4-212ENST00000590180 SPXQ9BT56 116 aa8.42□□□□□ -1.06
TPM4-212ENST00000590180 LINC00588Q9Y4M8 146 aa8.42□□□□□ -1.06
TPM4-212ENST00000590180 TRAV34A0A0B4J273 112 aa8.41□□□□□ -1.06
TPM4-212ENST00000590180 KANTRA0A1W2PQU2 76 aa8.41□□□□□ -1.06
TPM4-212ENST00000590180 MAP1LC3B2A6NCE7 125 aa8.41□□□□□ -1.06
TPM4-212ENST00000590180 PAX4O43316 350 aa8.41□□□□□ -1.06
TPM4-212ENST00000590180 ZNF345Q14585 488 aa8.41□□□□□ -1.06
TPM4-212ENST00000590180 ZFP69Q49AA0 526 aa8.41□□□□□ -1.06
TPM4-212ENST00000590180 LINC00336Q6ZUF6 198 aa8.41□□□□□ -1.06
TPM4-212ENST00000590180 KCNS1Q96KK3 526 aa8.41□□□□□ -1.06
TPM4-212ENST00000590180 LINC00479Q96M42 142 aa8.41□□□□□ -1.06
TPM4-212ENST00000590180 ZNF471Q9BX82 626 aaPredicted RBP8.41□□□□□ -1.06
TPM4-212ENST00000590180 MAP1LC3BQ9GZQ8 125 aa8.41□□□□□ -1.06
TPM4-212ENST00000590180 SDF2L1Q9HCN8 221 aa8.41□□□□□ -1.06
TPM4-212ENST00000590180 TRGV4A0A0C4DH28 118 aa8.4□□□□□ -1.06
TPM4-212ENST00000590180 FBLL1A6NHQ2 334 aaKnown RBP8.4□□□□□ -1.06
TPM4-212ENST00000590180 H3BNG1 76 aa8.4□□□□□ -1.06
TPM4-212ENST00000590180 GCGP01275 180 aa8.4□□□□□ -1.06
TPM4-212ENST00000590180 IGLV2-11P01706 119 aa8.4□□□□□ -1.06
TPM4-212ENST00000590180 PPT1P50897 306 aa8.4□□□□□ -1.06
TPM4-212ENST00000590180 ZNF80P51504 273 aaPredicted RBP8.4□□□□□ -1.06
TPM4-212ENST00000590180 ESRGQ1W209 222 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms