RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 OR5C1Q8NGR4 320 aa12.43□□□□□ -0.42
H3F3B-209ENST00000589949 LINC00467Q9BRT7 94 aa12.43□□□□□ -0.42
H3F3B-209ENST00000589949 TP53TG3Q9ULZ0 132 aa12.43□□□□□ -0.42
H3F3B-209ENST00000589949 A0A096LPF7 62 aa12.42□□□□□ -0.42
H3F3B-209ENST00000589949 H3BNG1 76 aa12.42□□□□□ -0.42
H3F3B-209ENST00000589949 MPDU1O75352 247 aa12.42□□□□□ -0.42
H3F3B-209ENST00000589949 CRISP2P16562 243 aa12.42□□□□□ -0.42
H3F3B-209ENST00000589949 FAM122CQ6P4D5 195 aa12.42□□□□□ -0.42
H3F3B-209ENST00000589949 SLC51BQ86UW2 128 aa12.42□□□□□ -0.42
H3F3B-209ENST00000589949 LINC00477Q96M19 166 aa12.42□□□□□ -0.42
H3F3B-209ENST00000589949 UPK3BQ9BT76 320 aa12.42□□□□□ -0.42
H3F3B-209ENST00000589949 Q9H3A6 140 aa12.42□□□□□ -0.42
H3F3B-209ENST00000589949 PRELID1Q9Y255 219 aa12.42□□□□□ -0.42
H3F3B-209ENST00000589949 IFITM2Q01629 132 aa12.41□□□□□ -0.42
H3F3B-209ENST00000589949 ANXA2RQ3ZCQ2 193 aa12.41□□□□□ -0.42
H3F3B-209ENST00000589949 FXYD5Q96DB9 178 aa12.41□□□□□ -0.42
H3F3B-209ENST00000589949 C18orf15Q96N68 181 aa12.41□□□□□ -0.42
H3F3B-209ENST00000589949 CYTL1Q9NRR1 136 aa12.41□□□□□ -0.42
H3F3B-209ENST00000589949 MRPS16Q9Y3D3 137 aaKnown RBP12.41□□□□□ -0.42
H3F3B-209ENST00000589949 TRGV1A0A0A0MS02 117 aa12.4□□□□□ -0.42
H3F3B-209ENST00000589949 OR10J4P0C629 311 aa12.4□□□□□ -0.42
H3F3B-209ENST00000589949 NBEAP1P0C6P0 100 aa12.4□□□□□ -0.42
H3F3B-209ENST00000589949 EIF4E3Q8N5X7 224 aaKnown RBP12.4□□□□□ -0.42
H3F3B-209ENST00000589949 PHYHIPLQ96FC7 376 aa12.4□□□□□ -0.42
H3F3B-209ENST00000589949 ZNF471Q9BX82 626 aaPredicted RBP12.4□□□□□ -0.42
H3F3B-209ENST00000589949 FUT9Q9Y231 359 aa12.4□□□□□ -0.42
H3F3B-209ENST00000589949 TRGV2A0A075B6R0 118 aa12.39□□□□□ -0.43
H3F3B-209ENST00000589949 SPINK4O60575 86 aa12.39□□□□□ -0.43
H3F3B-209ENST00000589949 GPX1P07203 203 aa12.39□□□□□ -0.43
H3F3B-209ENST00000589949 TCL1AP56279 114 aa12.39□□□□□ -0.43
H3F3B-209ENST00000589949 EIF5AP63241 154 aaKnown RBP12.39□□□□□ -0.43
H3F3B-209ENST00000589949 ZNF680Q8NEM1 530 aa12.39□□□□□ -0.43
H3F3B-209ENST00000589949 Q8TAT8 98 aa12.39□□□□□ -0.43
H3F3B-209ENST00000589949 SMIM3Q9BZL3 60 aa12.39□□□□□ -0.43
H3F3B-209ENST00000589949 WDR61Q9GZS3 305 aaKnown RBP12.39□□□□□ -0.43
H3F3B-209ENST00000589949 OR51M1Q9H341 326 aa12.39□□□□□ -0.43
H3F3B-209ENST00000589949 ZNF492Q9P255 531 aa12.39□□□□□ -0.43
H3F3B-209ENST00000589949 KRTAP10-2P60368 255 aa12.38□□□□□ -0.43
H3F3B-209ENST00000589949 TEX261Q6UWH6 196 aa12.38□□□□□ -0.43
H3F3B-209ENST00000589949 STOML3Q8TAV4 291 aa12.38□□□□□ -0.43
H3F3B-209ENST00000589949 AAMDCQ9H7C9 122 aa12.38□□□□□ -0.43
H3F3B-209ENST00000589949 WFDC1Q9HC57 220 aa12.38□□□□□ -0.43
H3F3B-209ENST00000589949 BORCS7-ASMTA0A0B4J1R7 106 aa12.37□□□□□ -0.43
H3F3B-209ENST00000589949 CDK2AP2O75956 126 aa12.37□□□□□ -0.43
H3F3B-209ENST00000589949 NMBP08949 121 aa12.37□□□□□ -0.43
H3F3B-209ENST00000589949 ZNF266Q14584 549 aa12.37□□□□□ -0.43
H3F3B-209ENST00000589949 RPL7L1Q6DKI1 246 aaKnown RBP12.37□□□□□ -0.43
H3F3B-209ENST00000589949 SPATA12Q7Z6I5 190 aa12.37□□□□□ -0.43
H3F3B-209ENST00000589949 PAXXQ9BUH6 204 aa12.37□□□□□ -0.43
H3F3B-209ENST00000589949 MRPL16Q9NX20 251 aaKnown RBP12.37□□□□□ -0.43
H3F3B-209ENST00000589949 RGS13O14921 159 aa12.36□□□□□ -0.43
H3F3B-209ENST00000589949 EIF3GO75821 320 aaKnown RBP eCLIP12.36□□□□□ -0.435e-18■■□□□ 12.1
H3F3B-209ENST00000589949 IGHV3-53P01767 116 aa12.36□□□□□ -0.43
H3F3B-209ENST00000589949 TPT1P13693 172 aaKnown RBP12.36□□□□□ -0.43
H3F3B-209ENST00000589949 TTC32Q5I0X7 151 aa12.36□□□□□ -0.43
H3F3B-209ENST00000589949 TMEM78Q5T7P6 136 aa12.36□□□□□ -0.43
H3F3B-209ENST00000589949 ATP5SQ99766 215 aa12.36□□□□□ -0.43
H3F3B-209ENST00000589949 APOBP04114 4563 aaKnown RBP12.35□□□□□ -0.43
H3F3B-209ENST00000589949 IGHV1OR15-1A0A075B7D0 117 aa12.35□□□□□ -0.43
H3F3B-209ENST00000589949 IFNA7P01567 189 aa12.35□□□□□ -0.43
H3F3B-209ENST00000589949 ZNF138P52744 262 aa12.35□□□□□ -0.43
H3F3B-209ENST00000589949 IBA57Q5T440 356 aaKnown RBP12.35□□□□□ -0.43
H3F3B-209ENST00000589949 MRPL32Q9BYC8 188 aaKnown RBP12.35□□□□□ -0.43
H3F3B-209ENST00000589949 A0A1W2PPQ1 181 aa12.34□□□□□ -0.43
H3F3B-209ENST00000589949 RANP62826 216 aaKnown RBP12.34□□□□□ -0.43
H3F3B-209ENST00000589949 Q6ZRN7 208 aaPredicted RBP12.34□□□□□ -0.43
H3F3B-209ENST00000589949 IFNA5P01569 189 aa12.33□□□□□ -0.44
H3F3B-209ENST00000589949 LINC00315P59091 139 aa12.33□□□□□ -0.44
H3F3B-209ENST00000589949 FHL2Q14192 279 aa12.33□□□□□ -0.44
H3F3B-209ENST00000589949 MUC21Q5SSG8 566 aa12.33□□□□□ -0.44
H3F3B-209ENST00000589949 MDFICQ9P1T7 246 aa12.33□□□□□ -0.44
H3F3B-209ENST00000589949 PAX4O43316 350 aa12.32□□□□□ -0.44
H3F3B-209ENST00000589949 OR7C2O60412 319 aa12.32□□□□□ -0.44
H3F3B-209ENST00000589949 EIF5AL1Q6IS14 154 aaKnown RBP12.32□□□□□ -0.44
H3F3B-209ENST00000589949 MAPKAPK5-AS1Q8N8E1 139 aa12.32□□□□□ -0.44
H3F3B-209ENST00000589949 SCGB1C1Q8TD33 95 aa12.32□□□□□ -0.44
H3F3B-209ENST00000589949 C8orf49Q96NF6 230 aa12.32□□□□□ -0.44
H3F3B-209ENST00000589949 TNFRSF18Q9Y5U5 241 aa12.32□□□□□ -0.44
H3F3B-209ENST00000589949 DNAH5Q8TE73 4624 aa12.31□□□□□ -0.44
H3F3B-209ENST00000589949 BTF3P20290 206 aaKnown RBP12.31□□□□□ -0.44
H3F3B-209ENST00000589949 CRYBA4P53673 196 aa12.31□□□□□ -0.44
H3F3B-209ENST00000589949 FFAR4Q5NUL3 377 aa12.31□□□□□ -0.44
H3F3B-209ENST00000589949 TRBV7-9A0A0J9YWB2 115 aa12.3□□□□□ -0.44
H3F3B-209ENST00000589949 NXPH4O95158 308 aa12.3□□□□□ -0.44
H3F3B-209ENST00000589949 SEC11BP0C7V7 166 aa12.3□□□□□ -0.44
H3F3B-209ENST00000589949 FUSP35637 526 aaKnown RBP eCLIP12.3□□□□□ -0.441e-7■■■■□ 26
H3F3B-209ENST00000589949 UBE2L3P68036 154 aaKnown RBP12.3□□□□□ -0.44
H3F3B-209ENST00000589949 ALKAL2Q6UX46 152 aa12.3□□□□□ -0.44
H3F3B-209ENST00000589949 KCNIP2Q9NS61 270 aa12.3□□□□□ -0.44
H3F3B-209ENST00000589949 PRO0255Q9UI72 69 aa12.3□□□□□ -0.44
H3F3B-209ENST00000589949 HHLA3Q9XRX5 114 aa12.3□□□□□ -0.44
H3F3B-209ENST00000589949 ICOSQ9Y6W8 199 aa12.3□□□□□ -0.44
H3F3B-209ENST00000589949 RBAKDNA6NC62 111 aa12.29□□□□□ -0.44
H3F3B-209ENST00000589949 DIRC3C9JPN6 131 aa12.29□□□□□ -0.44
H3F3B-209ENST00000589949 C17orf112F2Z3M2 114 aa12.29□□□□□ -0.44
H3F3B-209ENST00000589949 SIVA1O15304 175 aa12.29□□□□□ -0.44
H3F3B-209ENST00000589949 SFTA3P0C7M3 94 aa12.29□□□□□ -0.44
H3F3B-209ENST00000589949 ATP6V0CP27449 155 aa12.29□□□□□ -0.44
H3F3B-209ENST00000589949 LYPD5Q6UWN5 251 aa12.29□□□□□ -0.44
H3F3B-209ENST00000589949 LYPD1Q8N2G4 141 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms