RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 GNG4P50150 75 aa11.07□□□□□ -0.64
ATG4D-211ENST00000589753 BTN1A1Q13410 526 aa11.07□□□□□ -0.64
ATG4D-211ENST00000589753 DEFB135Q30KP9 77 aa11.07□□□□□ -0.64
ATG4D-211ENST00000589753 CENPWQ5EE01 88 aa11.07□□□□□ -0.64
ATG4D-211ENST00000589753 PRR9Q5T870 116 aa11.07□□□□□ -0.64
ATG4D-211ENST00000589753 BAGE2Q86Y30 109 aa11.07□□□□□ -0.64
ATG4D-211ENST00000589753 TMEM183AQ8IXX5 376 aa11.07□□□□□ -0.64
ATG4D-211ENST00000589753 CSNK1G2-AS1Q8NCQ2 148 aa11.07□□□□□ -0.64
ATG4D-211ENST00000589753 B9D2Q9BPU9 175 aa11.07□□□□□ -0.64
ATG4D-211ENST00000589753 TRAV12-3A0A0B4J271 114 aa11.06□□□□□ -0.64
ATG4D-211ENST00000589753 SMUG1Q53HV7 270 aa11.06□□□□□ -0.64
ATG4D-211ENST00000589753 RCHY1Q96PM5 261 aa11.06□□□□□ -0.64
ATG4D-211ENST00000589753 C20orf144Q9BQM9 153 aa11.06□□□□□ -0.64
ATG4D-211ENST00000589753 C9JCJ5 164 aa11.05□□□□□ -0.64
ATG4D-211ENST00000589753 GCGP01275 180 aa11.05□□□□□ -0.64
ATG4D-211ENST00000589753 UQCC3Q6UW78 93 aa11.05□□□□□ -0.64
ATG4D-211ENST00000589753 COX8CQ7Z4L0 72 aa11.05□□□□□ -0.64
ATG4D-211ENST00000589753 C1orf158Q8N1D5 194 aa11.05□□□□□ -0.64
ATG4D-211ENST00000589753 NHLRC2Q8NBF2 726 aa11.05□□□□□ -0.64
ATG4D-211ENST00000589753 RNF183Q96D59 192 aa11.05□□□□□ -0.64
ATG4D-211ENST00000589753 SMIM7Q9BQ49 75 aa11.05□□□□□ -0.64
ATG4D-211ENST00000589753 NIPSNAP3BQ9BS92 247 aa11.05□□□□□ -0.64
ATG4D-211ENST00000589753 GOLT1BQ9Y3E0 138 aa11.05□□□□□ -0.64
ATG4D-211ENST00000589753 TRBV20OR9-2A0A075B6H5 130 aa11.04□□□□□ -0.64
ATG4D-211ENST00000589753 ZNF727A8MUV8 499 aa11.04□□□□□ -0.64
ATG4D-211ENST00000589753 SPRY2O43597 315 aa11.04□□□□□ -0.64
ATG4D-211ENST00000589753 RBMY1A1P0DJD3 496 aaKnown RBP11.04□□□□□ -0.64
ATG4D-211ENST00000589753 RBMY1CP0DJD4 496 aa11.04□□□□□ -0.64
ATG4D-211ENST00000589753 RBMY1FQ15415 496 aaKnown RBP11.04□□□□□ -0.64
ATG4D-211ENST00000589753 Q6AWC8 147 aa11.04□□□□□ -0.64
ATG4D-211ENST00000589753 TMEM256Q8N2U0 113 aa11.04□□□□□ -0.64
ATG4D-211ENST00000589753 EIF4E3Q8N5X7 224 aaKnown RBP11.04□□□□□ -0.64
ATG4D-211ENST00000589753 SMIM12Q96EX1 92 aa11.04□□□□□ -0.64
ATG4D-211ENST00000589753 ZC2HC1AQ96GY0 325 aa11.04□□□□□ -0.64
ATG4D-211ENST00000589753 SPATA25Q9BR10 227 aa11.04□□□□□ -0.64
ATG4D-211ENST00000589753 TM2D3Q9BRN9 247 aa11.04□□□□□ -0.64
ATG4D-211ENST00000589753 TMEM208Q9BTX3 173 aa11.04□□□□□ -0.64
ATG4D-211ENST00000589753 MLST8Q9BVC4 326 aa11.04□□□□□ -0.64
ATG4D-211ENST00000589753 TP53TG1Q9Y2A0 90 aa11.04□□□□□ -0.64
ATG4D-211ENST00000589753 IGHV3OR16-12A0A075B7B8 117 aa11.03□□□□□ -0.64
ATG4D-211ENST00000589753 TRAV21A0A0B4J279 112 aa11.03□□□□□ -0.64
ATG4D-211ENST00000589753 ZNF324O75467 553 aaPredicted RBP11.03□□□□□ -0.64
ATG4D-211ENST00000589753 IGLV2-8P01709 118 aa11.03□□□□□ -0.64
ATG4D-211ENST00000589753 SFTA3P0C7M3 94 aa11.03□□□□□ -0.64
ATG4D-211ENST00000589753 ZNF80P51504 273 aaPredicted RBP11.03□□□□□ -0.64
ATG4D-211ENST00000589753 FAM74A3Q4VXF1 159 aa11.03□□□□□ -0.64
ATG4D-211ENST00000589753 SOHLH1Q5JUK2 328 aa11.03□□□□□ -0.64
ATG4D-211ENST00000589753 ZNF705AQ6ZN79 300 aaPredicted RBP11.03□□□□□ -0.64
ATG4D-211ENST00000589753 LINC01587Q99440 93 aa11.03□□□□□ -0.64
ATG4D-211ENST00000589753 RETNQ9HD89 108 aa11.03□□□□□ -0.64
ATG4D-211ENST00000589753 PGPEP1LA6NFU8 196 aa11.02□□□□□ -0.65
ATG4D-211ENST00000589753 H7BYZ3 331 aa11.02□□□□□ -0.65
ATG4D-211ENST00000589753 PFN1P07737 140 aaKnown RBP11.02□□□□□ -0.65
ATG4D-211ENST00000589753 MGST1P10620 155 aaKnown RBP11.02□□□□□ -0.65
ATG4D-211ENST00000589753 Q6ZQT7 251 aa11.02□□□□□ -0.65
ATG4D-211ENST00000589753 OVOL2Q9BRP0 275 aa11.02□□□□□ -0.65
ATG4D-211ENST00000589753 ZMAT4Q9H898 229 aa11.02□□□□□ -0.65
ATG4D-211ENST00000589753 MEGF8Q7Z7M0 2845 aa11.01□□□□□ -0.65
ATG4D-211ENST00000589753 FABP5P3A8MUU1 101 aa11.01□□□□□ -0.65
ATG4D-211ENST00000589753 FAM162BQ5T6X4 162 aa11.01□□□□□ -0.65
ATG4D-211ENST00000589753 OR11H2Q8NH07 326 aa11.01□□□□□ -0.65
ATG4D-211ENST00000589753 OCC1Q8TAD7 63 aa11.01□□□□□ -0.65
ATG4D-211ENST00000589753 LY96Q9Y6Y9 160 aa11.01□□□□□ -0.65
ATG4D-211ENST00000589753 SH2D1AO60880 128 aa11□□□□□ -0.65
ATG4D-211ENST00000589753 CRIP1P50238 77 aa11□□□□□ -0.65
ATG4D-211ENST00000589753 PRR27Q6MZM9 219 aa11□□□□□ -0.65
ATG4D-211ENST00000589753 PYGO2Q9BRQ0 406 aa11□□□□□ -0.65
ATG4D-211ENST00000589753 BIN3Q9NQY0 253 aa11□□□□□ -0.65
ATG4D-211ENST00000589753 X6R8D5 127 aa11□□□□□ -0.65
ATG4D-211ENST00000589753 IGHV1OR15-1A0A075B7D0 117 aa10.99□□□□□ -0.65
ATG4D-211ENST00000589753 NHLRC4P0CG21 123 aaPredicted RBP10.99□□□□□ -0.65
ATG4D-211ENST00000589753 HTN1P15515 57 aa10.99□□□□□ -0.65
ATG4D-211ENST00000589753 TMEM241Q24JQ0 296 aa10.99□□□□□ -0.65
ATG4D-211ENST00000589753 MUC21Q5SSG8 566 aa10.99□□□□□ -0.65
ATG4D-211ENST00000589753 FAM159AQ6UWV7 190 aa10.99□□□□□ -0.65
ATG4D-211ENST00000589753 NEU1Q99519 415 aa10.99□□□□□ -0.65
ATG4D-211ENST00000589753 LINC00467Q9BRT7 94 aa10.99□□□□□ -0.65
ATG4D-211ENST00000589753 NAT8Q9UHE5 227 aa10.99□□□□□ -0.65
ATG4D-211ENST00000589753 NAGKQ9UJ70 344 aa10.99□□□□□ -0.65
ATG4D-211ENST00000589753 TMEM218A2RU14 115 aa10.98□□□□□ -0.65
ATG4D-211ENST00000589753 SMIM9A6NGZ8 99 aa10.98□□□□□ -0.65
ATG4D-211ENST00000589753 ZNF705GA8MUZ8 300 aaPredicted RBP10.98□□□□□ -0.65
ATG4D-211ENST00000589753 K7EN84 100 aa10.98□□□□□ -0.65
ATG4D-211ENST00000589753 OR5I1Q13606 314 aa10.98□□□□□ -0.65
ATG4D-211ENST00000589753 RRN3P1Q2M238 152 aa10.98□□□□□ -0.65
ATG4D-211ENST00000589753 LINC01551Q86U37 167 aa10.98□□□□□ -0.65
ATG4D-211ENST00000589753 ORM1P02763 201 aa10.97□□□□□ -0.65
ATG4D-211ENST00000589753 PRM2P04554 102 aa10.97□□□□□ -0.65
ATG4D-211ENST00000589753 MIFP14174 115 aa10.97□□□□□ -0.65
ATG4D-211ENST00000589753 ANXA2RQ3ZCQ2 193 aa10.97□□□□□ -0.65
ATG4D-211ENST00000589753 DAZAP1Q96EP5 407 aaKnown RBP10.97□□□□□ -0.65
ATG4D-211ENST00000589753 KCNS1Q96KK3 526 aa10.97□□□□□ -0.65
ATG4D-211ENST00000589753 C11orf21Q9P2W6 132 aa10.97□□□□□ -0.65
ATG4D-211ENST00000589753 CBY3A6NI87 242 aa10.96□□□□□ -0.65
ATG4D-211ENST00000589753 F8W036 122 aa10.96□□□□□ -0.65
ATG4D-211ENST00000589753 RPL23P62829 140 aaKnown RBP10.96□□□□□ -0.65
ATG4D-211ENST00000589753 NDUFA5Q16718 116 aa10.96□□□□□ -0.65
ATG4D-211ENST00000589753 TDRG1Q3Y452 100 aa10.96□□□□□ -0.65
ATG4D-211ENST00000589753 SDF2L1Q9HCN8 221 aa10.96□□□□□ -0.65
ATG4D-211ENST00000589753 IGKV3D-20A0A0C4DH25 116 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms