RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 DEFB130AP0DP74 79 aa12.4□□□□□ -0.42
H3F3B-207ENST00000589417 IBA57Q5T440 356 aaKnown RBP12.4□□□□□ -0.42
H3F3B-207ENST00000589417 GOLT1AQ6ZVE7 132 aa12.4□□□□□ -0.42
H3F3B-207ENST00000589417 C18orf15Q96N68 181 aa12.4□□□□□ -0.42
H3F3B-207ENST00000589417 IGHV1OR15-1A0A075B7D0 117 aa12.39□□□□□ -0.43
H3F3B-207ENST00000589417 SNURFLB1AK76 121 aa12.39□□□□□ -0.43
H3F3B-207ENST00000589417 GGTLC3B5MD39 225 aa12.39□□□□□ -0.43
H3F3B-207ENST00000589417 UMAD1C9J7I0 102 aa12.39□□□□□ -0.43
H3F3B-207ENST00000589417 TCRAP04437 139 aa12.39□□□□□ -0.43
H3F3B-207ENST00000589417 ATP5G1P05496 136 aa12.39□□□□□ -0.43
H3F3B-207ENST00000589417 ATP5G3P48201 142 aa12.39□□□□□ -0.43
H3F3B-207ENST00000589417 SUMO1P63165 101 aaKnown RBP12.39□□□□□ -0.43
H3F3B-207ENST00000589417 EIF5AP63241 154 aaKnown RBP12.39□□□□□ -0.43
H3F3B-207ENST00000589417 NKX6-2Q9C056 277 aaPredicted RBP12.39□□□□□ -0.43
H3F3B-207ENST00000589417 EPDR1Q9UM22 224 aa12.39□□□□□ -0.43
H3F3B-207ENST00000589417 KANTRA0A1W2PQU2 76 aa12.38□□□□□ -0.43
H3F3B-207ENST00000589417 FBLL1A6NHQ2 334 aaKnown RBP12.38□□□□□ -0.43
H3F3B-207ENST00000589417 Q6ZQT7 251 aa12.38□□□□□ -0.43
H3F3B-207ENST00000589417 TVP23CQ96ET8 276 aa12.38□□□□□ -0.43
H3F3B-207ENST00000589417 TP53TG3Q9ULZ0 132 aa12.38□□□□□ -0.43
H3F3B-207ENST00000589417 RGS13O14921 159 aa12.37□□□□□ -0.43
H3F3B-207ENST00000589417 TCL1AP56279 114 aa12.37□□□□□ -0.43
H3F3B-207ENST00000589417 GNG5P63218 68 aa12.37□□□□□ -0.43
H3F3B-207ENST00000589417 TDRG1Q3Y452 100 aa12.37□□□□□ -0.43
H3F3B-207ENST00000589417 TMUB2Q71RG4 321 aa12.37□□□□□ -0.43
H3F3B-207ENST00000589417 TRAV8-1A0A0A6YYK1 113 aa12.36□□□□□ -0.43
H3F3B-207ENST00000589417 K7EQM0 130 aa12.36□□□□□ -0.43
H3F3B-207ENST00000589417 IGLV2-11P01706 119 aa12.36□□□□□ -0.43
H3F3B-207ENST00000589417 P0DMU3 169 aa12.36□□□□□ -0.43
H3F3B-207ENST00000589417 FAM231AP0DMU4 169 aa12.36□□□□□ -0.43
H3F3B-207ENST00000589417 FAM231CP0DMU5 169 aa12.36□□□□□ -0.43
H3F3B-207ENST00000589417 DPPA3Q6W0C5 159 aa12.36□□□□□ -0.43
H3F3B-207ENST00000589417 C15orf53Q8NAA6 179 aa12.36□□□□□ -0.43
H3F3B-207ENST00000589417 STOML3Q8TAV4 291 aa12.36□□□□□ -0.43
H3F3B-207ENST00000589417 MBD3L1Q8WWY6 194 aa12.36□□□□□ -0.43
H3F3B-207ENST00000589417 ATG101Q9BSB4 218 aa12.36□□□□□ -0.43
H3F3B-207ENST00000589417 ZNF471Q9BX82 626 aaPredicted RBP12.36□□□□□ -0.43
H3F3B-207ENST00000589417 TMPRSS5Q9H3S3 457 aa12.36□□□□□ -0.43
H3F3B-207ENST00000589417 GSN-AS1Q9NRJ2 163 aa12.36□□□□□ -0.43
H3F3B-207ENST00000589417 RPH3ALQ9UNE2 315 aa12.36□□□□□ -0.43
H3F3B-207ENST00000589417 MAP1LC3B2A6NCE7 125 aa12.35□□□□□ -0.43
H3F3B-207ENST00000589417 SPINK4O60575 86 aa12.35□□□□□ -0.43
H3F3B-207ENST00000589417 HTN3P15516 51 aa12.35□□□□□ -0.43
H3F3B-207ENST00000589417 FHITP49789 147 aa12.35□□□□□ -0.43
H3F3B-207ENST00000589417 LGALS9BQ3B8N2 356 aa12.35□□□□□ -0.43
H3F3B-207ENST00000589417 TMEM88Q6PEY1 159 aa12.35□□□□□ -0.43
H3F3B-207ENST00000589417 CYB561D1Q8N8Q1 229 aa12.35□□□□□ -0.43
H3F3B-207ENST00000589417 TMEM75Q8N9X5 138 aa12.35□□□□□ -0.43
H3F3B-207ENST00000589417 MAP1LC3BQ9GZQ8 125 aa12.35□□□□□ -0.43
H3F3B-207ENST00000589417 TREM1Q9NP99 234 aa12.35□□□□□ -0.43
H3F3B-207ENST00000589417 KLF12Q9Y4X4 402 aa12.35□□□□□ -0.43
H3F3B-207ENST00000589417 ARL2-SNX15V9GYD0 113 aa12.35□□□□□ -0.43
H3F3B-207ENST00000589417 DNAH6Q9C0G6 4158 aa12.34□□□□□ -0.43
H3F3B-207ENST00000589417 TRAV21A0A0B4J279 112 aa12.34□□□□□ -0.43
H3F3B-207ENST00000589417 FAM74A7A6NL05 159 aa12.34□□□□□ -0.43
H3F3B-207ENST00000589417 C1QBP02746 253 aa12.34□□□□□ -0.43
H3F3B-207ENST00000589417 FGF8P55075 233 aaPredicted RBP12.34□□□□□ -0.43
H3F3B-207ENST00000589417 LGALSLQ3ZCW2 172 aaPredicted RBP12.34□□□□□ -0.43
H3F3B-207ENST00000589417 PSG8Q9UQ74 426 aa12.34□□□□□ -0.43
H3F3B-207ENST00000589417 F5H768 121 aa12.33□□□□□ -0.44
H3F3B-207ENST00000589417 TPT1P13693 172 aaKnown RBP12.33□□□□□ -0.44
H3F3B-207ENST00000589417 FLI1Q01543 452 aaPredicted RBP12.33□□□□□ -0.44
H3F3B-207ENST00000589417 Q6ZTI0 123 aa12.33□□□□□ -0.44
H3F3B-207ENST00000589417 IQCF2Q8IXL9 164 aa12.33□□□□□ -0.44
H3F3B-207ENST00000589417 POM121L12Q8N7R1 296 aa12.33□□□□□ -0.44
H3F3B-207ENST00000589417 HIST1H2BAQ96A08 127 aa12.33□□□□□ -0.44
H3F3B-207ENST00000589417 TCEAL7Q9BRU2 100 aa12.33□□□□□ -0.44
H3F3B-207ENST00000589417 NDFIP1Q9BT67 221 aa12.33□□□□□ -0.44
H3F3B-207ENST00000589417 GAGE12BA1L429 117 aa12.32□□□□□ -0.44
H3F3B-207ENST00000589417 PFDN1O60925 122 aa12.32□□□□□ -0.44
H3F3B-207ENST00000589417 GAGE7O76087 117 aa12.32□□□□□ -0.44
H3F3B-207ENST00000589417 GAGE12FP0CL80 117 aa12.32□□□□□ -0.44
H3F3B-207ENST00000589417 GAGE12GP0CL81 117 aa12.32□□□□□ -0.44
H3F3B-207ENST00000589417 GAGE12IP0CL82 117 aa12.32□□□□□ -0.44
H3F3B-207ENST00000589417 RNF212Q495C1 297 aa12.32□□□□□ -0.44
H3F3B-207ENST00000589417 SAPCD1Q5SSQ6 148 aa12.32□□□□□ -0.44
H3F3B-207ENST00000589417 FAM159AQ6UWV7 190 aa12.32□□□□□ -0.44
H3F3B-207ENST00000589417 H3BNG1 76 aa12.31□□□□□ -0.44
H3F3B-207ENST00000589417 ZNF415Q09FC8 603 aa12.31□□□□□ -0.44
H3F3B-207ENST00000589417 SGK494Q96LW2 274 aa12.31□□□□□ -0.44
H3F3B-207ENST00000589417 SPXQ9BT56 116 aa12.31□□□□□ -0.44
H3F3B-207ENST00000589417 TRGV11A0A075B6L2 103 aa12.3□□□□□ -0.44
H3F3B-207ENST00000589417 RAB5CP51148 216 aa12.3□□□□□ -0.44
H3F3B-207ENST00000589417 UBE2G2P60604 165 aa12.3□□□□□ -0.44
H3F3B-207ENST00000589417 MUC21Q5SSG8 566 aa12.3□□□□□ -0.44
H3F3B-207ENST00000589417 COX8CQ7Z4L0 72 aa12.3□□□□□ -0.44
H3F3B-207ENST00000589417 SFT2D1Q8WV19 159 aa12.3□□□□□ -0.44
H3F3B-207ENST00000589417 KCNS1Q96KK3 526 aa12.3□□□□□ -0.44
H3F3B-207ENST00000589417 MDFICQ9P1T7 246 aa12.3□□□□□ -0.44
H3F3B-207ENST00000589417 TRGV1A0A0A0MS02 117 aa12.29□□□□□ -0.44
H3F3B-207ENST00000589417 F6UZH7 168 aa12.29□□□□□ -0.44
H3F3B-207ENST00000589417 PEX7O00628 323 aa12.29□□□□□ -0.44
H3F3B-207ENST00000589417 IFNA7P01567 189 aa12.29□□□□□ -0.44
H3F3B-207ENST00000589417 HOXA5P20719 270 aa12.29□□□□□ -0.44
H3F3B-207ENST00000589417 PPT1P50897 306 aa12.29□□□□□ -0.44
H3F3B-207ENST00000589417 SMUG1Q53HV7 270 aa12.29□□□□□ -0.44
H3F3B-207ENST00000589417 EIF5AL1Q6IS14 154 aaKnown RBP12.29□□□□□ -0.44
H3F3B-207ENST00000589417 FAM213BQ8TBF2 198 aa12.29□□□□□ -0.44
H3F3B-207ENST00000589417 RASL10AQ92737 203 aa12.29□□□□□ -0.44
H3F3B-207ENST00000589417 TRAV1-1A0A0B4J248 108 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms