RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 AKR1C3P42330 323 aa13.69□□□□□ -0.22
CLPTM1-209ENST00000588855 MEF2BQ02080 365 aaPredicted RBP13.69□□□□□ -0.22
CLPTM1-209ENST00000588855 Q6ZQT7 251 aa13.69□□□□□ -0.22
CLPTM1-209ENST00000588855 LINC01587Q99440 93 aa13.69□□□□□ -0.22
CLPTM1-209ENST00000588855 NIPSNAP3BQ9BS92 247 aa13.69□□□□□ -0.22
CLPTM1-209ENST00000588855 NDFIP1Q9BT67 221 aa13.69□□□□□ -0.22
CLPTM1-209ENST00000588855 FBLL1A6NHQ2 334 aaKnown RBP13.69□□□□□ -0.22
CLPTM1-209ENST00000588855 C2CD4CQ8TF44 421 aa13.69□□□□□ -0.22
CLPTM1-209ENST00000588855 C8orf49Q96NF6 230 aa13.69□□□□□ -0.22
CLPTM1-209ENST00000588855 TXNDC17Q9BRA2 123 aa13.69□□□□□ -0.22
CLPTM1-209ENST00000588855 VAX2Q9UIW0 290 aa13.69□□□□□ -0.22
CLPTM1-209ENST00000588855 SMIM9A6NGZ8 99 aa13.68□□□□□ -0.22
CLPTM1-209ENST00000588855 ZNF705GA8MUZ8 300 aaPredicted RBP13.68□□□□□ -0.22
CLPTM1-209ENST00000588855 H7BYZ3 331 aa13.68□□□□□ -0.22
CLPTM1-209ENST00000588855 ZNF324O75467 553 aaPredicted RBP13.68□□□□□ -0.22
CLPTM1-209ENST00000588855 UBE2G1P62253 170 aa13.68□□□□□ -0.22
CLPTM1-209ENST00000588855 FMC1Q96HJ9 113 aa13.68□□□□□ -0.22
CLPTM1-209ENST00000588855 C11orf68Q9H3H3 251 aaKnown RBP13.68□□□□□ -0.22
CLPTM1-209ENST00000588855 KLF12Q9Y4X4 402 aa13.68□□□□□ -0.22
CLPTM1-209ENST00000588855 RRN3P1Q2M238 152 aa13.67□□□□□ -0.22
CLPTM1-209ENST00000588855 C11orf52Q96A22 123 aa13.67□□□□□ -0.22
CLPTM1-209ENST00000588855 HTN1P15515 57 aa13.66□□□□□ -0.22
CLPTM1-209ENST00000588855 TAGLN2P37802 199 aaKnown RBP13.66□□□□□ -0.22
CLPTM1-209ENST00000588855 TMEM183BQ1AE95 376 aa13.66□□□□□ -0.22
CLPTM1-209ENST00000588855 Q6AWC8 147 aa13.66□□□□□ -0.22
CLPTM1-209ENST00000588855 TRBV6-1A0A0K0K1D8 114 aa13.65□□□□□ -0.22
CLPTM1-209ENST00000588855 RBFOX3A6NFN3 312 aa13.65□□□□□ -0.22
CLPTM1-209ENST00000588855 AZU1P20160 251 aa13.65□□□□□ -0.22
CLPTM1-209ENST00000588855 TAS2R60P59551 318 aa13.65□□□□□ -0.22
CLPTM1-209ENST00000588855 IFITM2Q01629 132 aa13.65□□□□□ -0.22
CLPTM1-209ENST00000588855 TOR2AQ5JU69 321 aa13.65□□□□□ -0.22
CLPTM1-209ENST00000588855 SAPCD1Q5SSQ6 148 aa13.65□□□□□ -0.22
CLPTM1-209ENST00000588855 DERL1Q9BUN8 251 aa13.65□□□□□ -0.22
CLPTM1-209ENST00000588855 PDE6DO43924 150 aa13.64□□□□□ -0.23
CLPTM1-209ENST00000588855 ZNF80P51504 273 aaPredicted RBP13.64□□□□□ -0.23
CLPTM1-209ENST00000588855 ZNF506Q5JVG8 444 aa13.64□□□□□ -0.23
CLPTM1-209ENST00000588855 PYGO2Q9BRQ0 406 aa13.64□□□□□ -0.23
CLPTM1-209ENST00000588855 GCGP01275 180 aa13.64□□□□□ -0.23
CLPTM1-209ENST00000588855 LTAP01374 205 aa13.64□□□□□ -0.23
CLPTM1-209ENST00000588855 SMUG1Q53HV7 270 aa13.64□□□□□ -0.23
CLPTM1-209ENST00000588855 FAM210AQ96ND0 272 aa13.64□□□□□ -0.23
CLPTM1-209ENST00000588855 S100A9P06702 114 aaKnown RBP13.63□□□□□ -0.23
CLPTM1-209ENST00000588855 RPL35P42766 123 aaKnown RBP13.63□□□□□ -0.23
CLPTM1-209ENST00000588855 EMP1P54849 157 aa13.63□□□□□ -0.23
CLPTM1-209ENST00000588855 WWC2-AS2Q96NR7 200 aa13.63□□□□□ -0.23
CLPTM1-209ENST00000588855 ZFP30Q9Y2G7 519 aa13.63□□□□□ -0.23
CLPTM1-209ENST00000588855 TRAV21A0A0B4J279 112 aa13.62□□□□□ -0.23
CLPTM1-209ENST00000588855 RGS13O14921 159 aa13.62□□□□□ -0.23
CLPTM1-209ENST00000588855 MUC21Q5SSG8 566 aa13.62□□□□□ -0.23
CLPTM1-209ENST00000588855 ZNF767PQ75MW2 155 aa13.62□□□□□ -0.23
CLPTM1-209ENST00000588855 EIF5A2Q9GZV4 153 aaKnown RBP13.62□□□□□ -0.23
CLPTM1-209ENST00000588855 MED9Q9NWA0 146 aa13.62□□□□□ -0.23
CLPTM1-209ENST00000588855 IGHV1OR15-1A0A075B7D0 117 aa13.61□□□□□ -0.23
CLPTM1-209ENST00000588855 NHLRC2Q8NBF2 726 aa13.61□□□□□ -0.23
CLPTM1-209ENST00000588855 RNASE8Q8TDE3 154 aaKnown RBP13.61□□□□□ -0.23
CLPTM1-209ENST00000588855 ZC2HC1AQ96GY0 325 aa13.61□□□□□ -0.23
CLPTM1-209ENST00000588855 LINC00467Q9BRT7 94 aa13.61□□□□□ -0.23
CLPTM1-209ENST00000588855 CELA1Q9UNI1 258 aa13.61□□□□□ -0.23
CLPTM1-209ENST00000588855 PLAC8L1A1L4L8 177 aa13.6□□□□□ -0.23
CLPTM1-209ENST00000588855 TMEM189A5PLL7 270 aa13.6□□□□□ -0.23
CLPTM1-209ENST00000588855 EIF4E3Q8N5X7 224 aaKnown RBP13.6□□□□□ -0.23
CLPTM1-209ENST00000588855 TMEM263Q8WUH6 116 aaKnown RBP13.6□□□□□ -0.23
CLPTM1-209ENST00000588855 C16orf74Q96GX8 76 aa13.6□□□□□ -0.23
CLPTM1-209ENST00000588855 NAGKQ9UJ70 344 aa13.6□□□□□ -0.23
CLPTM1-209ENST00000588855 TP53TG3Q9ULZ0 132 aa13.6□□□□□ -0.23
CLPTM1-209ENST00000588855 CSMD3Q7Z407 3707 aa13.6□□□□□ -0.23
CLPTM1-209ENST00000588855 CBY3A6NI87 242 aa13.59□□□□□ -0.23
CLPTM1-209ENST00000588855 PFN1P07737 140 aaKnown RBP13.59□□□□□ -0.23
CLPTM1-209ENST00000588855 COX8CQ7Z4L0 72 aa13.59□□□□□ -0.23
CLPTM1-209ENST00000588855 BAGE2Q86Y30 109 aa13.59□□□□□ -0.23
CLPTM1-209ENST00000588855 TMEM183AQ8IXX5 376 aa13.59□□□□□ -0.23
CLPTM1-209ENST00000588855 IL17DQ8TAD2 202 aa13.59□□□□□ -0.23
CLPTM1-209ENST00000588855 STARD9Q9P2P6 4700 aa13.59□□□□□ -0.23
CLPTM1-209ENST00000588855 RAB19A4D1S5 217 aa13.59□□□□□ -0.23
CLPTM1-209ENST00000588855 RAB14P61106 215 aa13.59□□□□□ -0.23
CLPTM1-209ENST00000588855 CENPWQ5EE01 88 aa13.59□□□□□ -0.23
CLPTM1-209ENST00000588855 ZNF493Q6ZR52 646 aa13.59□□□□□ -0.23
CLPTM1-209ENST00000588855 C11orf21Q9P2W6 132 aa13.59□□□□□ -0.23
CLPTM1-209ENST00000588855 TMEM250H0YL14 139 aa13.58□□□□□ -0.24
CLPTM1-209ENST00000588855 CRIP1P50238 77 aa13.58□□□□□ -0.24
CLPTM1-209ENST00000588855 ANXA2RQ3ZCQ2 193 aa13.58□□□□□ -0.24
CLPTM1-209ENST00000588855 FAM222AQ5U5X8 452 aa13.58□□□□□ -0.24
CLPTM1-209ENST00000588855 FAM159AQ6UWV7 190 aa13.58□□□□□ -0.24
CLPTM1-209ENST00000588855 MLST8Q9BVC4 326 aa13.58□□□□□ -0.24
CLPTM1-209ENST00000588855 TRBV20OR9-2A0A075B6H5 130 aa13.57□□□□□ -0.24
CLPTM1-209ENST00000588855 C11orf45Q8TAV5 145 aa13.57□□□□□ -0.24
CLPTM1-209ENST00000588855 DKK2Q9UBU2 259 aa13.57□□□□□ -0.24
CLPTM1-209ENST00000588855 NANOS2P60321 138 aaKnown RBP13.56□□□□□ -0.24
CLPTM1-209ENST00000588855 TDRG1Q3Y452 100 aa13.56□□□□□ -0.24
CLPTM1-209ENST00000588855 CLLU1Q5K131 121 aa13.56□□□□□ -0.24
CLPTM1-209ENST00000588855 C11orf72Q8NBR9 251 aa13.56□□□□□ -0.24
CLPTM1-209ENST00000588855 PARLQ9H300 379 aa13.56□□□□□ -0.24
CLPTM1-209ENST00000588855 DYNC2H1Q8NCM8 4307 aaKnown RBP13.55□□□□□ -0.24
CLPTM1-209ENST00000588855 CXorf65A6NEN9 183 aa13.55□□□□□ -0.24
CLPTM1-209ENST00000588855 PGPEP1LA6NFU8 196 aa13.55□□□□□ -0.24
CLPTM1-209ENST00000588855 FABP5P3A8MUU1 101 aa13.55□□□□□ -0.24
CLPTM1-209ENST00000588855 SH2D1AO60880 128 aa13.55□□□□□ -0.24
CLPTM1-209ENST00000588855 IGLV2-8P01709 118 aa13.55□□□□□ -0.24
CLPTM1-209ENST00000588855 SRP19P09132 144 aaKnown RBP13.55□□□□□ -0.24
CLPTM1-209ENST00000588855 GNG4P50150 75 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms