RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	GPR183	P32249	361 aa		10.88	□□□□□ -0.67
NEDD4L-223	ENST00000588516	MRPL51	Q4U2R6	128 aa	Known RBP	10.88	□□□□□ -0.67
NEDD4L-223	ENST00000588516	TMEM78	Q5T7P6	136 aa		10.88	□□□□□ -0.67
NEDD4L-223	ENST00000588516	ZFAND3	Q9H8U3	227 aa		10.88	□□□□□ -0.67
NEDD4L-223	ENST00000588516	UBTD1	Q9HAC8	227 aa		10.88	□□□□□ -0.67
NEDD4L-223	ENST00000588516	SIGLEC8	Q9NYZ4	499 aa		10.88	□□□□□ -0.67
NEDD4L-223	ENST00000588516	SMAD5-AS1	Q9Y6J3	95 aa		10.88	□□□□□ -0.67
NEDD4L-223	ENST00000588516		S4R3C0	116 aa		10.88	□□□□□ -0.67
NEDD4L-223	ENST00000588516	FBN1	P35555	2871 aa	Known RBP	10.88	□□□□□ -0.67
NEDD4L-223	ENST00000588516	CENPVL3	A0A0U1RRI6	287 aa		10.87	□□□□□ -0.67
NEDD4L-223	ENST00000588516	TCF21	O43680	179 aa		10.87	□□□□□ -0.67
NEDD4L-223	ENST00000588516	BRI3	O95415	125 aa		10.87	□□□□□ -0.67
NEDD4L-223	ENST00000588516	COX8A	P10176	69 aa		10.87	□□□□□ -0.67
NEDD4L-223	ENST00000588516	CRIP2	P52943	208 aa	Predicted RBP	10.87	□□□□□ -0.67
NEDD4L-223	ENST00000588516	CACNG7	P62955	275 aa		10.87	□□□□□ -0.67
NEDD4L-223	ENST00000588516	ECSCR	Q19T08	205 aa		10.87	□□□□□ -0.67
NEDD4L-223	ENST00000588516	MAJIN	Q3KP22	176 aa		10.87	□□□□□ -0.67
NEDD4L-223	ENST00000588516	MOB4	Q9Y3A3	225 aa		10.87	□□□□□ -0.67
NEDD4L-223	ENST00000588516	TMSB15B	A0A087X1C1	80 aa		10.86	□□□□□ -0.67
NEDD4L-223	ENST00000588516	LINC01546	A6NGU7	62 aa		10.86	□□□□□ -0.67
NEDD4L-223	ENST00000588516		H3BUA1	57 aa		10.86	□□□□□ -0.67
NEDD4L-223	ENST00000588516	SMAD7	O15105	426 aa	Known RBP	10.86	□□□□□ -0.67
NEDD4L-223	ENST00000588516	SIVA1	O15304	175 aa		10.86	□□□□□ -0.67
NEDD4L-223	ENST00000588516	SAA4	P35542	130 aa		10.86	□□□□□ -0.67
NEDD4L-223	ENST00000588516	IFI27	P40305	119 aa	Predicted RBP	10.86	□□□□□ -0.67
NEDD4L-223	ENST00000588516	ZNF138	P52744	262 aa		10.86	□□□□□ -0.67
NEDD4L-223	ENST00000588516	PTTG1IP	P53801	180 aa		10.86	□□□□□ -0.67
NEDD4L-223	ENST00000588516	LMO4	P61968	165 aa		10.86	□□□□□ -0.67
NEDD4L-223	ENST00000588516	hDV102S1	A0JD36	115 aa		10.85	□□□□□ -0.67
NEDD4L-223	ENST00000588516	ATP6V0E1	O15342	81 aa		10.85	□□□□□ -0.67
NEDD4L-223	ENST00000588516	IGHV3-23	P01764	117 aa		10.85	□□□□□ -0.67
NEDD4L-223	ENST00000588516	TFPI2	P48307	235 aa		10.85	□□□□□ -0.67
NEDD4L-223	ENST00000588516	SEC11A	P67812	179 aa		10.85	□□□□□ -0.67
NEDD4L-223	ENST00000588516	UBE2V1	Q13404	147 aa		10.85	□□□□□ -0.67
NEDD4L-223	ENST00000588516	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		10.85	□□□□□ -0.67
NEDD4L-223	ENST00000588516	AMN1	Q8IY45	258 aa		10.85	□□□□□ -0.67
NEDD4L-223	ENST00000588516	OR9G4	Q8NGQ1	327 aa		10.85	□□□□□ -0.67
NEDD4L-223	ENST00000588516	VGLL1	Q99990	258 aa		10.85	□□□□□ -0.67
NEDD4L-223	ENST00000588516	SMPX	Q9UHP9	88 aa		10.85	□□□□□ -0.67
NEDD4L-223	ENST00000588516	CBY1	Q9Y3M2	126 aa		10.85	□□□□□ -0.67
NEDD4L-223	ENST00000588516	VPS13C	Q709C8	3753 aa		10.85	□□□□□ -0.67
NEDD4L-223	ENST00000588516	TLN2	Q9Y4G6	2542 aa		10.85	□□□□□ -0.67
NEDD4L-223	ENST00000588516	TMEM213	A2RRL7	107 aa		10.84	□□□□□ -0.67
NEDD4L-223	ENST00000588516	CD5L	O43866	347 aa		10.84	□□□□□ -0.67
NEDD4L-223	ENST00000588516	C9orf47	Q6ZRZ4	202 aa		10.84	□□□□□ -0.67
NEDD4L-223	ENST00000588516	LINC00173	Q6ZV60	143 aa		10.84	□□□□□ -0.67
NEDD4L-223	ENST00000588516	C9orf139	Q6ZV77	190 aa		10.84	□□□□□ -0.67
NEDD4L-223	ENST00000588516	C5orf56	Q8N8D9	126 aa		10.84	□□□□□ -0.67
NEDD4L-223	ENST00000588516	IFI27L1	Q96BM0	104 aa		10.84	□□□□□ -0.67
NEDD4L-223	ENST00000588516	USMG5	Q96IX5	58 aa		10.84	□□□□□ -0.67
NEDD4L-223	ENST00000588516		U3KQE9	123 aa		10.84	□□□□□ -0.67
NEDD4L-223	ENST00000588516	TRAV41	A0A0B4J266	112 aa		10.84	□□□□□ -0.67
NEDD4L-223	ENST00000588516	NDUFS8	O00217	210 aa		10.84	□□□□□ -0.67
NEDD4L-223	ENST00000588516	NUDT3	O95989	172 aa		10.84	□□□□□ -0.67
NEDD4L-223	ENST00000588516	NPS	P0C0P6	89 aa		10.84	□□□□□ -0.67
NEDD4L-223	ENST00000588516	SAMD13	Q5VXD3	122 aa		10.84	□□□□□ -0.67
NEDD4L-223	ENST00000588516	CLEC19A	Q6UXS0	136 aa		10.84	□□□□□ -0.67
NEDD4L-223	ENST00000588516	KRTAP1-3	Q8IUG1	177 aa		10.84	□□□□□ -0.67
NEDD4L-223	ENST00000588516	PIFO	Q8TCI5	191 aa		10.84	□□□□□ -0.67
NEDD4L-223	ENST00000588516	LOC389332	A0A1B0GUA5	103 aa		10.83	□□□□□ -0.68
NEDD4L-223	ENST00000588516	OVOL1	O14753	267 aa		10.83	□□□□□ -0.68
NEDD4L-223	ENST00000588516	IGHG4	P01861	327 aa		10.83	□□□□□ -0.68
NEDD4L-223	ENST00000588516	FCER1G	P30273	86 aa		10.83	□□□□□ -0.68
NEDD4L-223	ENST00000588516	PAX8	Q06710	450 aa		10.83	□□□□□ -0.68
NEDD4L-223	ENST00000588516	BVES-AS1	Q5T3Y7	98 aa		10.83	□□□□□ -0.68
NEDD4L-223	ENST00000588516	BCL6B	Q8N143	479 aa	Predicted RBP	10.83	□□□□□ -0.68
NEDD4L-223	ENST00000588516	DEFB125	Q8N687	156 aa		10.83	□□□□□ -0.68
NEDD4L-223	ENST00000588516	OR4X2	Q8NGF9	303 aa		10.83	□□□□□ -0.68
NEDD4L-223	ENST00000588516	OR8A1	Q8NGG7	326 aa		10.83	□□□□□ -0.68
NEDD4L-223	ENST00000588516	AJUBA	Q96IF1	538 aa		10.83	□□□□□ -0.68
NEDD4L-223	ENST00000588516	LINC00477	Q96M19	166 aa		10.83	□□□□□ -0.68
NEDD4L-223	ENST00000588516	PIMREG	Q9BSJ6	248 aa		10.83	□□□□□ -0.68
NEDD4L-223	ENST00000588516	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.83	□□□□□ -0.68
NEDD4L-223	ENST00000588516	IGHV4-4	A0A075B6R2	117 aa		10.82	□□□□□ -0.68
NEDD4L-223	ENST00000588516		A6NDN8	102 aa		10.82	□□□□□ -0.68
NEDD4L-223	ENST00000588516	PRSS47	A8MTI9	375 aa		10.82	□□□□□ -0.68
NEDD4L-223	ENST00000588516		H0Y8G0	127 aa		10.82	□□□□□ -0.68
NEDD4L-223	ENST00000588516	ATP5L	O75964	103 aa		10.82	□□□□□ -0.68
NEDD4L-223	ENST00000588516	MEGF9	Q9H1U4	602 aa		10.82	□□□□□ -0.68
NEDD4L-223	ENST00000588516	BEX4	Q9NWD9	120 aa	Predicted RBP	10.82	□□□□□ -0.68
NEDD4L-223	ENST00000588516	IGHV1-69D	A0A0B4J2H0	117 aa		10.81	□□□□□ -0.68
NEDD4L-223	ENST00000588516	TRBV7-9	A0A0J9YWB2	115 aa		10.81	□□□□□ -0.68
NEDD4L-223	ENST00000588516	NDUFA4	O00483	81 aa		10.81	□□□□□ -0.68
NEDD4L-223	ENST00000588516	IGHV1-69	P01742	117 aa		10.81	□□□□□ -0.68
NEDD4L-223	ENST00000588516	ZNF80	P51504	273 aa	Predicted RBP	10.81	□□□□□ -0.68
NEDD4L-223	ENST00000588516	MPV17L2	Q567V2	206 aa		10.81	□□□□□ -0.68
NEDD4L-223	ENST00000588516		Q5PR19	223 aa		10.81	□□□□□ -0.68
NEDD4L-223	ENST00000588516		Q8N8P6	123 aa		10.81	□□□□□ -0.68
NEDD4L-223	ENST00000588516		Q8TAT8	98 aa		10.81	□□□□□ -0.68
NEDD4L-223	ENST00000588516	CCDC140	Q96MF4	163 aa		10.81	□□□□□ -0.68
NEDD4L-223	ENST00000588516	BPESC1	Q9GZL8	116 aa		10.81	□□□□□ -0.68
NEDD4L-223	ENST00000588516	ABCA1	O95477	2261 aa		10.8	□□□□□ -0.68
NEDD4L-223	ENST00000588516	CLPSL1	A2RUU4	121 aa		10.8	□□□□□ -0.68
NEDD4L-223	ENST00000588516		K7EMI3	77 aa		10.8	□□□□□ -0.68
NEDD4L-223	ENST00000588516	CRLF1	O75462	422 aa		10.8	□□□□□ -0.68
NEDD4L-223	ENST00000588516	NPY	P01303	97 aa		10.8	□□□□□ -0.68
NEDD4L-223	ENST00000588516	VAMP3	Q15836	100 aa		10.8	□□□□□ -0.68
NEDD4L-223	ENST00000588516	FBLN7	Q53RD9	439 aa		10.8	□□□□□ -0.68
NEDD4L-223	ENST00000588516	C8orf86	Q6ZUL3	223 aa		10.8	□□□□□ -0.68
NEDD4L-223	ENST00000588516	TMEM158	Q8WZ71	300 aa		10.8	□□□□□ -0.68

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