RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 PLEKHB2Q96CS7 222 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 ABHD14BQ96IU4 210 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 S100A13Q99584 98 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 B9D2Q9BPU9 175 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 C1QTNF6Q9BXI9 259 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 GABARAPL1Q9H0R8 117 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 MED9Q9NWA0 146 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 ZNF586Q9NXT0 402 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 BET1LQ9NYM9 111 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 TVP23BQ9NYZ1 205 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 OR5AC2Q9NZP5 309 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 CKLFQ9UBR5 152 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 MARCOQ9UEW3 520 aaPredicted RBP1.78□□□□□ -2.12
VPS4B-203ENST00000588323 SLC23A2Q9UGH3 650 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 HS3ST2Q9Y278 367 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 MED31Q9Y3C7 131 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 FIS1Q9Y3D6 152 aa1.78□□□□□ -2.12
VPS4B-203ENST00000588323 TRRAPQ9Y4A5 3859 aa1.78□□□□□ -2.13
VPS4B-203ENST00000588323 MYO7BQ6PIF6 2116 aa1.78□□□□□ -2.13
VPS4B-203ENST00000588323 DOCK9Q9BZ29 2069 aa1.78□□□□□ -2.13
VPS4B-203ENST00000588323 SCN1AP35498 2009 aa1.78□□□□□ -2.13
VPS4B-203ENST00000588323 A0A0G2JMM0 328 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 A0A1B0GW64 132 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 A0A1W2PPB8 328 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 TLCD2A6NGC4 264 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 KIR3DP1A8MWS1 328 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 C4orf51C9J302 202 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 OVOL1O14753 267 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 NPFFO15130 113 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 IGKV1D-33P01593 117 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 IGKV1-33P01594 117 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 TRGV3P03979 118 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 IGLV7-43P04211 117 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 LINC00694P0DN24 101 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 CGB3P0DN86 165 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 CGB7P0DN87 165 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 ETV6P41212 452 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 LINC00313P59037 77 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 HERVK_113P63121 156 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 PSG9Q00887 426 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 PEA15Q15121 130 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 RTL8BQ17RB0 113 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 HRCT1Q6UXD1 115 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 LINC00299Q6ZSB3 139 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 SSX8Q7RTT4 187 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 ZNF550Q7Z398 422 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 SGPP2Q8IWX5 399 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 EXOC3-AS1Q8N2X6 119 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 ZNF709Q8N972 641 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 OR52R1Q8NGF1 315 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 OR8B12Q8NGG6 310 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 OR10D4PQ8NGN7 298 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 OR2T27Q8NH04 317 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 LCN9Q8WX39 176 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 PSMF1Q92530 271 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 BORCS8Q96FH0 119 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 HYLS1Q96M11 299 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 OR4C12Q96R67 309 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 MGLLQ99685 303 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 SPIN2AQ99865 258 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 SPIN2BQ9BPZ2 258 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 RTL8AQ9BWD3 113 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 ATG5Q9H1Y0 275 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 CXorf21Q9HAI6 301 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 ZNF286AQ9HBT8 521 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 TAS2R8Q9NYW2 309 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 MCTS1Q9ULC4 181 aaKnown RBP1.77□□□□□ -2.13
VPS4B-203ENST00000588323 BOKQ9UMX3 212 aaPredicted RBP1.77□□□□□ -2.13
VPS4B-203ENST00000588323 TRAPPC1Q9Y5R8 145 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 S4R3C0 116 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 CITO14578 2027 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 SVEP1Q4LDE5 3571 aa1.77□□□□□ -2.13
VPS4B-203ENST00000588323 IGLV3-12A0A075B6K2 115 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 IGHV3OR15-7A0A075B7D8 119 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 IGKV1-12A0A0C4DH73 117 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 LOC102725191A0A1B0GVB3 256 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 C7orf71A4D174 169 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 GGT3PA6NGU5 568 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 TMEM212A6NML5 194 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 A8MWP4 228 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 GGTLC3B5MD39 225 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 CDC42EP2O14613 210 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 PDCD5O14737 125 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 UBE2L6O14933 153 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 ZNF324O75467 553 aaPredicted RBP1.76□□□□□ -2.13
VPS4B-203ENST00000588323 TNFP01375 233 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 IGKV1D-12P01611 117 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 IGLV3-27P01718 113 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 IGHMP01871 453 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 SPINK8P0C7L1 97 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 LINC00032P0C843 101 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 IGLC6P0CF74 106 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 HIST1H1DP16402 221 aaKnown RBP1.76□□□□□ -2.13
VPS4B-203ENST00000588323 RPS4Y1P22090 263 aaKnown RBP1.76□□□□□ -2.13
VPS4B-203ENST00000588323 SRIP30626 198 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 ZNF93P35789 620 aaPredicted RBP1.76□□□□□ -2.13
VPS4B-203ENST00000588323 ATP5G3P48201 142 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 RHOGP84095 191 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 BSPH1Q075Z2 132 aa1.76□□□□□ -2.13
VPS4B-203ENST00000588323 IQCJQ1A5X6 159 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms