RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 DNAJC9Q8WXX5 260 aa2.45□□□□□ -2.02
TUBD1-208ENST00000588009 RMND5BQ96G75 393 aaPredicted RBP2.45□□□□□ -2.02
TUBD1-208ENST00000588009 C2orf50Q96LR7 162 aa2.45□□□□□ -2.02
TUBD1-208ENST00000588009 SCGB3A1Q96QR1 104 aa2.45□□□□□ -2.02
TUBD1-208ENST00000588009 SERPINI1Q99574 410 aa2.45□□□□□ -2.02
TUBD1-208ENST00000588009 MAP1LC3BQ9GZQ8 125 aa2.45□□□□□ -2.02
TUBD1-208ENST00000588009 SLC39A9Q9NUM3 307 aa2.45□□□□□ -2.02
TUBD1-208ENST00000588009 SSR3Q9UNL2 185 aa2.45□□□□□ -2.02
TUBD1-208ENST00000588009 POLEQ07864 2286 aa2.44□□□□□ -2.02
TUBD1-208ENST00000588009 OR51F1A6NGY5 319 aa2.44□□□□□ -2.02
TUBD1-208ENST00000588009 ZNF705FA8MVS1 300 aaPredicted RBP2.44□□□□□ -2.02
TUBD1-208ENST00000588009 TSTD3H0UI37 97 aa2.44□□□□□ -2.02
TUBD1-208ENST00000588009 NDUFC2O95298 119 aa2.44□□□□□ -2.02
TUBD1-208ENST00000588009 COX6B1P14854 86 aa2.44□□□□□ -2.02
TUBD1-208ENST00000588009 FXYD2P54710 66 aa2.44□□□□□ -2.02
TUBD1-208ENST00000588009 RELAQ04206 551 aa2.44□□□□□ -2.02
TUBD1-208ENST00000588009 LCA10Q71F78 164 aa2.44□□□□□ -2.02
TUBD1-208ENST00000588009 CLVS1Q8IUQ0 354 aaPredicted RBP2.44□□□□□ -2.02
TUBD1-208ENST00000588009 C12orf29Q8N999 325 aa2.44□□□□□ -2.02
TUBD1-208ENST00000588009 PFN4Q8NHR9 129 aa2.44□□□□□ -2.02
TUBD1-208ENST00000588009 GRPEL2Q8TAA5 225 aa2.44□□□□□ -2.02
TUBD1-208ENST00000588009 DCANP1Q8TF63 244 aa2.44□□□□□ -2.02
TUBD1-208ENST00000588009 C11orf40Q8WZ69 217 aa2.44□□□□□ -2.02
TUBD1-208ENST00000588009 GPER1Q99527 375 aa2.44□□□□□ -2.02
TUBD1-208ENST00000588009 RNF122Q9H9V4 155 aa2.44□□□□□ -2.02
TUBD1-208ENST00000588009 LRTM1Q9HBL6 345 aa2.44□□□□□ -2.02
TUBD1-208ENST00000588009 ERGIC3Q9Y282 383 aa2.44□□□□□ -2.02
TUBD1-208ENST00000588009 TRGC1P0CF51 173 aa2.43□□□□□ -2.02
TUBD1-208ENST00000588009 RAB4BP61018 213 aa2.43□□□□□ -2.02
TUBD1-208ENST00000588009 SLC38A11Q08AI6 406 aa2.43□□□□□ -2.02
TUBD1-208ENST00000588009 LTC4SQ16873 150 aa2.43□□□□□ -2.02
TUBD1-208ENST00000588009 KRTAP6-3Q3LI67 103 aa2.43□□□□□ -2.02
TUBD1-208ENST00000588009 MIR17HGQ75NE6 70 aa2.43□□□□□ -2.02
TUBD1-208ENST00000588009 TMEM86AQ8N2M4 240 aa2.43□□□□□ -2.02
TUBD1-208ENST00000588009 FAM24BQ8N5W8 94 aa2.43□□□□□ -2.02
TUBD1-208ENST00000588009 ST6GALNAC3Q8NDV1 305 aa2.43□□□□□ -2.02
TUBD1-208ENST00000588009 PLEKHB2Q96CS7 222 aa2.43□□□□□ -2.02
TUBD1-208ENST00000588009 GINS2Q9Y248 185 aa2.43□□□□□ -2.02
TUBD1-208ENST00000588009 Q9Y3F1 56 aa2.43□□□□□ -2.02
TUBD1-208ENST00000588009 HERC1Q15751 4861 aa2.42□□□□□ -2.02
TUBD1-208ENST00000588009 TNRC6BQ9UPQ9 1833 aaKnown RBP2.42□□□□□ -2.02
TUBD1-208ENST00000588009 NUP210LQ5VU65 1888 aa2.42□□□□□ -2.02
TUBD1-208ENST00000588009 MEIS3P1A6NDR6 274 aa2.42□□□□□ -2.02
TUBD1-208ENST00000588009 J3QRK9 145 aa2.42□□□□□ -2.02
TUBD1-208ENST00000588009 NAPSAO96009 420 aa2.42□□□□□ -2.02
TUBD1-208ENST00000588009 IFNA7P01567 189 aa2.42□□□□□ -2.02
TUBD1-208ENST00000588009 S100A4P26447 101 aaKnown RBP2.42□□□□□ -2.02
TUBD1-208ENST00000588009 S100GP29377 79 aa2.42□□□□□ -2.02
TUBD1-208ENST00000588009 CASP1P29466 404 aa2.42□□□□□ -2.02
TUBD1-208ENST00000588009 PSMD8P48556 350 aa2.42□□□□□ -2.02
TUBD1-208ENST00000588009 AQP4P55087 323 aa2.42□□□□□ -2.02
TUBD1-208ENST00000588009 SURF2Q15527 256 aaPredicted RBP2.42□□□□□ -2.02
TUBD1-208ENST00000588009 TMEM128Q5BJH2 165 aa2.42□□□□□ -2.02
TUBD1-208ENST00000588009 DEFB119Q8N690 84 aa2.42□□□□□ -2.02
TUBD1-208ENST00000588009 RNASE11Q8TAA1 199 aaKnown RBP2.42□□□□□ -2.02
TUBD1-208ENST00000588009 SPACA4Q8TDM5 124 aa2.42□□□□□ -2.02
TUBD1-208ENST00000588009 TMEM106AQ96A25 262 aa2.42□□□□□ -2.02
TUBD1-208ENST00000588009 PBDC1Q9BVG4 233 aa2.42□□□□□ -2.02
TUBD1-208ENST00000588009 TMEM106BQ9NUM4 274 aa2.42□□□□□ -2.02
TUBD1-208ENST00000588009 CHD3Q12873 2000 aaKnown RBP2.42□□□□□ -2.02
TUBD1-208ENST00000588009 ZNF860A6NHJ4 632 aa2.41□□□□□ -2.02
TUBD1-208ENST00000588009 AIPO00170 330 aa2.41□□□□□ -2.02
TUBD1-208ENST00000588009 CLPSP04118 112 aa2.41□□□□□ -2.02
TUBD1-208ENST00000588009 IGKV1-16P04430 117 aa2.41□□□□□ -2.02
TUBD1-208ENST00000588009 S100A12P80511 92 aa2.41□□□□□ -2.02
TUBD1-208ENST00000588009 NDUFA5Q16718 116 aa2.41□□□□□ -2.02
TUBD1-208ENST00000588009 LINC01554Q52M75 96 aa2.41□□□□□ -2.02
TUBD1-208ENST00000588009 HIST3H2BBQ8N257 126 aa2.41□□□□□ -2.02
TUBD1-208ENST00000588009 TMEM35BQ8NCS4 154 aa2.41□□□□□ -2.02
TUBD1-208ENST00000588009 HSPB9Q9BQS6 159 aa2.41□□□□□ -2.02
TUBD1-208ENST00000588009 GINS4Q9BRT9 223 aa2.41□□□□□ -2.02
TUBD1-208ENST00000588009 PBOV1Q9GZY1 135 aa2.41□□□□□ -2.02
TUBD1-208ENST00000588009 TMEM133Q9H2Q1 129 aa2.41□□□□□ -2.02
TUBD1-208ENST00000588009 DOCK4Q8N1I0 1966 aa2.41□□□□□ -2.02
TUBD1-208ENST00000588009 MDC1Q14676 2089 aaKnown RBP2.4□□□□□ -2.02
TUBD1-208ENST00000588009 RIIAD1A6NNX1 92 aa2.4□□□□□ -2.03
TUBD1-208ENST00000588009 ARPC5O15511 151 aa2.4□□□□□ -2.03
TUBD1-208ENST00000588009 BANF1O75531 89 aa2.4□□□□□ -2.03
TUBD1-208ENST00000588009 TOMM20LQ6UXN7 152 aa2.4□□□□□ -2.03
TUBD1-208ENST00000588009 TRAPPC6BQ86SZ2 158 aa2.4□□□□□ -2.03
TUBD1-208ENST00000588009 DYDC1Q8WWB3 177 aa2.4□□□□□ -2.03
TUBD1-208ENST00000588009 MALSU1Q96EH3 234 aa2.4□□□□□ -2.03
TUBD1-208ENST00000588009 CARD19Q96LW7 228 aa2.4□□□□□ -2.03
TUBD1-208ENST00000588009 EFCAB11Q9BUY7 163 aa2.4□□□□□ -2.03
TUBD1-208ENST00000588009 IMUPQ9GZP8 106 aa2.4□□□□□ -2.03
TUBD1-208ENST00000588009 CKLFQ9UBR5 152 aa2.4□□□□□ -2.03
TUBD1-208ENST00000588009 BAIAP2Q9UQB8 552 aa2.4□□□□□ -2.03
TUBD1-208ENST00000588009 IGKV1-9A0A0C4DH69 117 aa2.39□□□□□ -2.03
TUBD1-208ENST00000588009 SCGB1A1P11684 91 aa2.39□□□□□ -2.03
TUBD1-208ENST00000588009 YPEL3P61236 119 aaPredicted RBP2.39□□□□□ -2.03
TUBD1-208ENST00000588009 TMEM155Q4W5P6 130 aa2.39□□□□□ -2.03
TUBD1-208ENST00000588009 SAMD13Q5VXD3 122 aa2.39□□□□□ -2.03
TUBD1-208ENST00000588009 SIGLECL1Q8N7X8 197 aa2.39□□□□□ -2.03
TUBD1-208ENST00000588009 WFDC11Q8NEX6 87 aa2.39□□□□□ -2.03
TUBD1-208ENST00000588009 WFDC5Q8TCV5 224 aa2.39□□□□□ -2.03
TUBD1-208ENST00000588009 SLAMF6Q96DU3 332 aa2.39□□□□□ -2.03
TUBD1-208ENST00000588009 ADAT3Q96EY9 351 aaPredicted RBP2.39□□□□□ -2.03
TUBD1-208ENST00000588009 TMEM70Q9BUB7 260 aa2.39□□□□□ -2.03
TUBD1-208ENST00000588009 OSTCQ9NRP0 149 aa2.39□□□□□ -2.03
TUBD1-208ENST00000588009 PCTPQ9UKL6 214 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms