RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 SH3BGRL3Q9H299 93 aa13.96□□□□□ -0.17
TRAPPC6A-203ENST00000587818 FXYD6-FXYD2A0A087WZ82 144 aa13.95□□□□□ -0.18
TRAPPC6A-203ENST00000587818 PRSS29PA6NIE9 313 aa13.95□□□□□ -0.18
TRAPPC6A-203ENST00000587818 SPINK4O60575 86 aa13.95□□□□□ -0.18
TRAPPC6A-203ENST00000587818 ARL14EPLP0DKL9 152 aa13.95□□□□□ -0.18
TRAPPC6A-203ENST00000587818 CDC34P49427 236 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC6A-203ENST00000587818 CCL18P55774 89 aa13.95□□□□□ -0.18
TRAPPC6A-203ENST00000587818 TCL1AP56279 114 aa13.95□□□□□ -0.18
TRAPPC6A-203ENST00000587818 LINC00336Q6ZUF6 198 aa13.95□□□□□ -0.18
TRAPPC6A-203ENST00000587818 GOLT1AQ6ZVE7 132 aa13.95□□□□□ -0.18
TRAPPC6A-203ENST00000587818 RAB24Q969Q5 203 aa13.95□□□□□ -0.18
TRAPPC6A-203ENST00000587818 SGK494Q96LW2 274 aa13.95□□□□□ -0.18
TRAPPC6A-203ENST00000587818 MRPL16Q9NX20 251 aaKnown RBP13.95□□□□□ -0.18
TRAPPC6A-203ENST00000587818 HECTD4Q9Y4D8 3996 aa13.95□□□□□ -0.18
TRAPPC6A-203ENST00000587818 TRBV7-9A0A0J9YWB2 115 aa13.94□□□□□ -0.18
TRAPPC6A-203ENST00000587818 RNF222A6NCQ9 220 aa13.94□□□□□ -0.18
TRAPPC6A-203ENST00000587818 RPL7L1Q6DKI1 246 aaKnown RBP13.94□□□□□ -0.18
TRAPPC6A-203ENST00000587818 INO80EQ8NBZ0 244 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC6A-203ENST00000587818 OR2G3Q8NGZ4 309 aa13.94□□□□□ -0.18
TRAPPC6A-203ENST00000587818 ZNRF2Q8NHG8 242 aa13.94□□□□□ -0.18
TRAPPC6A-203ENST00000587818 ARPC5LQ9BPX5 153 aa13.94□□□□□ -0.18
TRAPPC6A-203ENST00000587818 PSMG3Q9BT73 122 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC6A-203ENST00000587818 MDFICQ9P1T7 246 aa13.94□□□□□ -0.18
TRAPPC6A-203ENST00000587818 TRAV8-1A0A0A6YYK1 113 aa13.93□□□□□ -0.18
TRAPPC6A-203ENST00000587818 IGHV3-53P01767 116 aa13.93□□□□□ -0.18
TRAPPC6A-203ENST00000587818 STAG3L2P0CL84 134 aa13.93□□□□□ -0.18
TRAPPC6A-203ENST00000587818 STAG3L3P0CL85 134 aa13.93□□□□□ -0.18
TRAPPC6A-203ENST00000587818 RGS21Q2M5E4 152 aa13.93□□□□□ -0.18
TRAPPC6A-203ENST00000587818 FAM74A1Q5RGS3 127 aa13.93□□□□□ -0.18
TRAPPC6A-203ENST00000587818 SSX7Q7RTT5 188 aa13.93□□□□□ -0.18
TRAPPC6A-203ENST00000587818 OR2T35Q8NGX2 323 aa13.93□□□□□ -0.18
TRAPPC6A-203ENST00000587818 TVP23CQ96ET8 276 aa13.93□□□□□ -0.18
TRAPPC6A-203ENST00000587818 A0A1B0GVY2 172 aa13.92□□□□□ -0.18
TRAPPC6A-203ENST00000587818 FAM3BP58499 235 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC6A-203ENST00000587818 IBA57Q5T440 356 aaKnown RBP13.92□□□□□ -0.18
TRAPPC6A-203ENST00000587818 VSIG2Q96IQ7 327 aa13.92□□□□□ -0.18
TRAPPC6A-203ENST00000587818 TNFSF18Q9UNG2 199 aa13.92□□□□□ -0.18
TRAPPC6A-203ENST00000587818 MUC4Q99102 2169 aa13.91□□□□□ -0.18
TRAPPC6A-203ENST00000587818 GCHFRP30047 84 aa13.91□□□□□ -0.18
TRAPPC6A-203ENST00000587818 ESRGQ1W209 222 aa13.91□□□□□ -0.18
TRAPPC6A-203ENST00000587818 NAGKQ9UJ70 344 aa13.91□□□□□ -0.18
TRAPPC6A-203ENST00000587818 F6UZH7 168 aa13.9□□□□□ -0.18
TRAPPC6A-203ENST00000587818 G3V3Q6 166 aa13.9□□□□□ -0.18
TRAPPC6A-203ENST00000587818 GNRH2O43555 120 aa13.9□□□□□ -0.18
TRAPPC6A-203ENST00000587818 SERF2P84101 59 aa13.9□□□□□ -0.18
TRAPPC6A-203ENST00000587818 TMEM183BQ1AE95 376 aa13.9□□□□□ -0.18
TRAPPC6A-203ENST00000587818 C1orf134Q5TEV5 83 aa13.9□□□□□ -0.18
TRAPPC6A-203ENST00000587818 Q6AWC8 147 aa13.9□□□□□ -0.18
TRAPPC6A-203ENST00000587818 TMEM183AQ8IXX5 376 aa13.9□□□□□ -0.18
TRAPPC6A-203ENST00000587818 ASB13Q8WXK3 278 aa13.9□□□□□ -0.18
TRAPPC6A-203ENST00000587818 ACTR3CQ9C0K3 210 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC6A-203ENST00000587818 LENEPQ9Y5L5 61 aa13.9□□□□□ -0.18
TRAPPC6A-203ENST00000587818 NBDYA0A0U1RRE5 68 aa13.89□□□□□ -0.19
TRAPPC6A-203ENST00000587818 SMLR1H3BR10 107 aa13.89□□□□□ -0.19
TRAPPC6A-203ENST00000587818 MBP02144 154 aa13.89□□□□□ -0.19
TRAPPC6A-203ENST00000587818 ZNF415Q09FC8 603 aa13.89□□□□□ -0.19
TRAPPC6A-203ENST00000587818 FAM159AQ6UWV7 190 aa13.89□□□□□ -0.19
TRAPPC6A-203ENST00000587818 TMED6Q8WW62 240 aa13.89□□□□□ -0.19
TRAPPC6A-203ENST00000587818 ST6GAL2Q96JF0 529 aa13.89□□□□□ -0.19
TRAPPC6A-203ENST00000587818 C18orf15Q96N68 181 aa13.89□□□□□ -0.19
TRAPPC6A-203ENST00000587818 TREM1Q9NP99 234 aa13.89□□□□□ -0.19
TRAPPC6A-203ENST00000587818 BORCS7-ASMTA0A0B4J1R7 106 aa13.88□□□□□ -0.19
TRAPPC6A-203ENST00000587818 SUMO1P63165 101 aaKnown RBP13.88□□□□□ -0.19
TRAPPC6A-203ENST00000587818 IQCF2Q8IXL9 164 aa13.88□□□□□ -0.19
TRAPPC6A-203ENST00000587818 SUN5Q8TC36 379 aa13.88□□□□□ -0.19
TRAPPC6A-203ENST00000587818 PKD1P98161 4303 aa13.88□□□□□ -0.19
TRAPPC6A-203ENST00000587818 A0A096LPF7 62 aa13.87□□□□□ -0.19
TRAPPC6A-203ENST00000587818 H3BNG1 76 aa13.87□□□□□ -0.19
TRAPPC6A-203ENST00000587818 ARL6IP6Q8N6S5 226 aa13.87□□□□□ -0.19
TRAPPC6A-203ENST00000587818 Q9H8V8 135 aa13.87□□□□□ -0.19
TRAPPC6A-203ENST00000587818 DYNC1H1Q14204 4646 aaKnown RBP13.87□□□□□ -0.19
TRAPPC6A-203ENST00000587818 CXorf1O96002 111 aa13.86□□□□□ -0.19
TRAPPC6A-203ENST00000587818 FHL2Q14192 279 aa13.86□□□□□ -0.19
TRAPPC6A-203ENST00000587818 ZNF726P1Q15940 193 aa13.86□□□□□ -0.19
TRAPPC6A-203ENST00000587818 SOHLH1Q5JUK2 328 aa13.86□□□□□ -0.19
TRAPPC6A-203ENST00000587818 C8orf49Q96NF6 230 aa13.86□□□□□ -0.19
TRAPPC6A-203ENST00000587818 HERC2O95714 4834 aa13.85□□□□□ -0.19
TRAPPC6A-203ENST00000587818 ARPC5O15511 151 aa13.85□□□□□ -0.19
TRAPPC6A-203ENST00000587818 PAX4O43316 350 aa13.85□□□□□ -0.19
TRAPPC6A-203ENST00000587818 TCRAP04437 139 aa13.85□□□□□ -0.19
TRAPPC6A-203ENST00000587818 SFTA3P0C7M3 94 aa13.85□□□□□ -0.19
TRAPPC6A-203ENST00000587818 C5orf17Q8NAS9 161 aa13.85□□□□□ -0.19
TRAPPC6A-203ENST00000587818 TRGV11A0A075B6L2 103 aa13.84□□□□□ -0.19
TRAPPC6A-203ENST00000587818 TRAV21A0A0B4J279 112 aa13.84□□□□□ -0.19
TRAPPC6A-203ENST00000587818 GGTLC3B5MD39 225 aa13.84□□□□□ -0.19
TRAPPC6A-203ENST00000587818 ZNF80P51504 273 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC6A-203ENST00000587818 CYTL1Q9NRR1 136 aa13.84□□□□□ -0.19
TRAPPC6A-203ENST00000587818 TMEM167BQ9NRX6 74 aa13.84□□□□□ -0.19
TRAPPC6A-203ENST00000587818 EPDR1Q9UM22 224 aa13.84□□□□□ -0.19
TRAPPC6A-203ENST00000587818 PSG8Q9UQ74 426 aa13.84□□□□□ -0.19
TRAPPC6A-203ENST00000587818 HHLA3Q9XRX5 114 aa13.84□□□□□ -0.19
TRAPPC6A-203ENST00000587818 KIAA1109Q2LD37 5005 aa13.84□□□□□ -0.19
TRAPPC6A-203ENST00000587818 IGHV3-16A0A0C4DH30 117 aa13.83□□□□□ -0.2
TRAPPC6A-203ENST00000587818 FGF8P55075 233 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC6A-203ENST00000587818 UBE2G2P60604 165 aa13.83□□□□□ -0.2
TRAPPC6A-203ENST00000587818 PRNTQ86SH4 94 aa13.83□□□□□ -0.2
TRAPPC6A-203ENST00000587818 ZNF479Q96JC4 524 aa13.83□□□□□ -0.2
TRAPPC6A-203ENST00000587818 IGLV2-11P01706 119 aa13.82□□□□□ -0.2
TRAPPC6A-203ENST00000587818 TYMSP04818 313 aa13.82□□□□□ -0.2
TRAPPC6A-203ENST00000587818 CRYBA4P53673 196 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms