RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 CMYA5Q8N3K9 4069 aa19.46■□□□□ 0.71
CAPNS1-204ENST00000587718 VWFP04275 2813 aa19.46■□□□□ 0.71
CAPNS1-204ENST00000587718 IGHG4P01861 327 aa19.45■□□□□ 0.7
CAPNS1-204ENST00000587718 PMCHP20382 165 aa19.45■□□□□ 0.7
CAPNS1-204ENST00000587718 LCN12Q6JVE5 192 aa19.45■□□□□ 0.7
CAPNS1-204ENST00000587718 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa19.45■□□□□ 0.7
CAPNS1-204ENST00000587718 PRO1933Q9H354 126 aa19.45■□□□□ 0.7
CAPNS1-204ENST00000587718 PPP1R14DQ9NXH3 145 aa19.45■□□□□ 0.7
CAPNS1-204ENST00000587718 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.44■□□□□ 0.7
CAPNS1-204ENST00000587718 TMEM189A5PLL7 270 aa19.44■□□□□ 0.7
CAPNS1-204ENST00000587718 ZNF705FA8MVS1 300 aaPredicted RBP19.44■□□□□ 0.7
CAPNS1-204ENST00000587718 ZNF705DP0CH99 300 aaPredicted RBP19.44■□□□□ 0.7
CAPNS1-204ENST00000587718 ZNF705BP0CI00 300 aaPredicted RBP19.44■□□□□ 0.7
CAPNS1-204ENST00000587718 PPIFP30405 207 aaKnown RBP19.44■□□□□ 0.7
CAPNS1-204ENST00000587718 ZNF493Q6ZR52 646 aa19.44■□□□□ 0.7
CAPNS1-204ENST00000587718 C20orf144Q9BQM9 153 aa19.44■□□□□ 0.7
CAPNS1-204ENST00000587718 HSBP1O75506 76 aa19.44■□□□□ 0.7
CAPNS1-204ENST00000587718 TRGV3P03979 118 aa19.44■□□□□ 0.7
CAPNS1-204ENST00000587718 SSBP4Q9BWG4 385 aaPredicted RBP19.44■□□□□ 0.7
CAPNS1-204ENST00000587718 NDUFA4O00483 81 aa19.43■□□□□ 0.7
CAPNS1-204ENST00000587718 SH2D1AO60880 128 aa19.43■□□□□ 0.7
CAPNS1-204ENST00000587718 NIT1Q86X76 327 aa19.43■□□□□ 0.7
CAPNS1-204ENST00000587718 C14orf144Q96I85 54 aa19.43■□□□□ 0.7
CAPNS1-204ENST00000587718 H3BUX3 64 aa19.42■□□□□ 0.7
CAPNS1-204ENST00000587718 M0QZ24 198 aa19.42■□□□□ 0.7
CAPNS1-204ENST00000587718 C8orf49Q96NF6 230 aa19.42■□□□□ 0.7
CAPNS1-204ENST00000587718 IGKV2-40A0A087WW87 121 aaPredicted RBP19.41■□□□□ 0.7
CAPNS1-204ENST00000587718 IGKV2D-40P01614 121 aaPredicted RBP19.41■□□□□ 0.7
CAPNS1-204ENST00000587718 MRPL52Q86TS9 123 aaKnown RBP19.41■□□□□ 0.7
CAPNS1-204ENST00000587718 WNK1Q9H4A3 2382 aa19.4■□□□□ 0.7
CAPNS1-204ENST00000587718 A0A0G2JLM5 398 aa19.4■□□□□ 0.7
CAPNS1-204ENST00000587718 OR5AL1P0C617 328 aa19.39■□□□□ 0.69
CAPNS1-204ENST00000587718 ARL3P36405 182 aa19.39■□□□□ 0.69
CAPNS1-204ENST00000587718 CTRLP40313 264 aa19.39■□□□□ 0.69
CAPNS1-204ENST00000587718 ARMS2P0C7Q2 107 aa19.38■□□□□ 0.69
CAPNS1-204ENST00000587718 Q8N976 141 aa19.38■□□□□ 0.69
CAPNS1-204ENST00000587718 ASCL2Q99929 193 aa19.38■□□□□ 0.69
CAPNS1-204ENST00000587718 LENEPQ9Y5L5 61 aa19.38■□□□□ 0.69
CAPNS1-204ENST00000587718 FABP5P3A8MUU1 101 aa19.37■□□□□ 0.69
CAPNS1-204ENST00000587718 IGLV1-40P01703 118 aa19.37■□□□□ 0.69
CAPNS1-204ENST00000587718 LY6EQ16553 131 aa19.37■□□□□ 0.69
CAPNS1-204ENST00000587718 GLMPQ8WWB7 406 aa19.37■□□□□ 0.69
CAPNS1-204ENST00000587718 VGLL1Q99990 258 aa19.37■□□□□ 0.69
CAPNS1-204ENST00000587718 KRTDAPP60985 99 aa19.36■□□□□ 0.69
CAPNS1-204ENST00000587718 PMCHL1Q16048 86 aa19.36■□□□□ 0.69
CAPNS1-204ENST00000587718 VAMP8Q9BV40 100 aa19.36■□□□□ 0.69
CAPNS1-204ENST00000587718 IGHV3-35A0A0C4DH35 117 aa19.36■□□□□ 0.69
CAPNS1-204ENST00000587718 M0R2Z0 102 aa19.36■□□□□ 0.69
CAPNS1-204ENST00000587718 C3orf79P0CE67 100 aa19.36■□□□□ 0.69
CAPNS1-204ENST00000587718 HIST1H1AQ02539 215 aaPredicted RBP19.36■□□□□ 0.69
CAPNS1-204ENST00000587718 RNASEKQ6P5S7 137 aaKnown RBP19.36■□□□□ 0.69
CAPNS1-204ENST00000587718 IGLC6P0CF74 106 aa19.35■□□□□ 0.69
CAPNS1-204ENST00000587718 CFHR3Q02985 330 aa19.35■□□□□ 0.69
CAPNS1-204ENST00000587718 LINC01559Q495D7 138 aa19.35■□□□□ 0.69
CAPNS1-204ENST00000587718 C9orf47Q6ZRZ4 202 aa19.35■□□□□ 0.69
CAPNS1-204ENST00000587718 CNFNQ9BYD5 112 aa19.35■□□□□ 0.69
CAPNS1-204ENST00000587718 LINC00614P0C842 121 aa19.34■□□□□ 0.69
CAPNS1-204ENST00000587718 C8orf86Q6ZUL3 223 aa19.34■□□□□ 0.69
CAPNS1-204ENST00000587718 TRAV8-2A0A0B4J237 113 aa19.33■□□□□ 0.69
CAPNS1-204ENST00000587718 NTF3P20783 257 aa19.33■□□□□ 0.69
CAPNS1-204ENST00000587718 URB1-AS1Q96HZ7 61 aa19.33■□□□□ 0.69
CAPNS1-204ENST00000587718 U3KQK5 164 aa19.33■□□□□ 0.69
CAPNS1-204ENST00000587718 ZNF138P52744 262 aa19.32■□□□□ 0.68
CAPNS1-204ENST00000587718 LYZL1Q6UWQ5 148 aa19.32■□□□□ 0.68
CAPNS1-204ENST00000587718 NOTCH1P46531 2555 aa19.32■□□□□ 0.68
CAPNS1-204ENST00000587718 C20orf202A1L168 122 aa19.32■□□□□ 0.68
CAPNS1-204ENST00000587718 HLA-DMBP28068 263 aa19.32■□□□□ 0.68
CAPNS1-204ENST00000587718 FAM19A2Q8N3H0 131 aa19.32■□□□□ 0.68
CAPNS1-204ENST00000587718 FER1L6-AS1Q8NA97 138 aa19.32■□□□□ 0.68
CAPNS1-204ENST00000587718 IGHV3OR16-8A0A075B7F1 116 aa19.31■□□□□ 0.68
CAPNS1-204ENST00000587718 BTF3P20290 206 aaKnown RBP19.31■□□□□ 0.68
CAPNS1-204ENST00000587718 TMEM78Q5T7P6 136 aa19.31■□□□□ 0.68
CAPNS1-204ENST00000587718 SAMD13Q5VXD3 122 aa19.31■□□□□ 0.68
CAPNS1-204ENST00000587718 CD33P20138 364 aa19.3■□□□□ 0.68
CAPNS1-204ENST00000587718 FAM104BQ5XKR9 115 aa19.3■□□□□ 0.68
CAPNS1-204ENST00000587718 MIEN1Q9BRT3 115 aa19.3■□□□□ 0.68
CAPNS1-204ENST00000587718 C2orf88Q9BSF0 95 aa19.3■□□□□ 0.68
CAPNS1-204ENST00000587718 K7EMT4 169 aa19.29■□□□□ 0.68
CAPNS1-204ENST00000587718 CRXO43186 299 aaPredicted RBP19.29■□□□□ 0.68
CAPNS1-204ENST00000587718 ZNF80P51504 273 aaPredicted RBP19.29■□□□□ 0.68
CAPNS1-204ENST00000587718 Q8TAT8 98 aa19.29■□□□□ 0.68
CAPNS1-204ENST00000587718 NPFFR1Q9GZQ6 430 aa19.29■□□□□ 0.68
CAPNS1-204ENST00000587718 C2orf70A6NJV1 201 aa19.28■□□□□ 0.68
CAPNS1-204ENST00000587718 AGPAT4-IT1Q9H0P7 198 aa19.28■□□□□ 0.68
CAPNS1-204ENST00000587718 PRAC2D3DTV9 90 aa19.27■□□□□ 0.68
CAPNS1-204ENST00000587718 OVOL1O14753 267 aa19.27■□□□□ 0.68
CAPNS1-204ENST00000587718 Q8N2B8 174 aa19.27■□□□□ 0.68
CAPNS1-204ENST00000587718 ZNF702PQ9H963 129 aa19.27■□□□□ 0.68
CAPNS1-204ENST00000587718 LINC00527Q9UJ94 153 aa19.27■□□□□ 0.68
CAPNS1-204ENST00000587718 TRBV7-9A0A0J9YWB2 115 aa19.27■□□□□ 0.67
CAPNS1-204ENST00000587718 PF4V1P10720 104 aa19.27■□□□□ 0.67
CAPNS1-204ENST00000587718 IGFL4Q6B9Z1 124 aa19.27■□□□□ 0.67
CAPNS1-204ENST00000587718 KLHDC1Q8N7A1 406 aa19.27■□□□□ 0.67
CAPNS1-204ENST00000587718 OR4X2Q8NGF9 303 aa19.27■□□□□ 0.67
CAPNS1-204ENST00000587718 C16orf92Q96LL3 132 aa19.27■□□□□ 0.67
CAPNS1-204ENST00000587718 LINC00477Q96M19 166 aa19.27■□□□□ 0.67
CAPNS1-204ENST00000587718 TMEM191AQ9H0A3 160 aa19.27■□□□□ 0.67
CAPNS1-204ENST00000587718 BLCAPP62952 87 aa19.26■□□□□ 0.67
CAPNS1-204ENST00000587718 HIST2H2BDQ6DRA6 164 aa19.26■□□□□ 0.67
CAPNS1-204ENST00000587718 TMEM70Q9BUB7 260 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms