RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 UBE2CO00762 179 aa13.31□□□□□ -0.28
H3F3B-206ENST00000587560 RBMY1A1P0DJD3 496 aaKnown RBP13.31□□□□□ -0.28
H3F3B-206ENST00000587560 RBMY1CP0DJD4 496 aa13.31□□□□□ -0.28
H3F3B-206ENST00000587560 APOC4P55056 127 aa13.31□□□□□ -0.28
H3F3B-206ENST00000587560 FXYD7P58549 80 aa13.31□□□□□ -0.28
H3F3B-206ENST00000587560 RBMY1FQ15415 496 aaKnown RBP13.31□□□□□ -0.28
H3F3B-206ENST00000587560 SAPCD1Q5SSQ6 148 aa13.31□□□□□ -0.28
H3F3B-206ENST00000587560 GFI1BQ5VTD9 330 aa13.31□□□□□ -0.28
H3F3B-206ENST00000587560 PCLOQ9Y6V0 5065 aa13.31□□□□□ -0.28
H3F3B-206ENST00000587560 ZNF324O75467 553 aaPredicted RBP13.3□□□□□ -0.28
H3F3B-206ENST00000587560 CENPWQ5EE01 88 aa13.3□□□□□ -0.28
H3F3B-206ENST00000587560 Q6AWC8 147 aa13.3□□□□□ -0.28
H3F3B-206ENST00000587560 SMIM12Q96EX1 92 aa13.3□□□□□ -0.28
H3F3B-206ENST00000587560 TREM1Q9NP99 234 aa13.3□□□□□ -0.28
H3F3B-206ENST00000587560 TRAV12-2A0A075B6T6 113 aa13.29□□□□□ -0.28
H3F3B-206ENST00000587560 CA1P00915 261 aaPredicted RBP13.29□□□□□ -0.28
H3F3B-206ENST00000587560 CRIP1P50238 77 aa13.29□□□□□ -0.28
H3F3B-206ENST00000587560 ZNF80P51504 273 aaPredicted RBP13.29□□□□□ -0.28
H3F3B-206ENST00000587560 Q6ZWC4 215 aa13.29□□□□□ -0.28
H3F3B-206ENST00000587560 BAGE2Q86Y30 109 aa13.29□□□□□ -0.28
H3F3B-206ENST00000587560 C1orf158Q8N1D5 194 aa13.29□□□□□ -0.28
H3F3B-206ENST00000587560 MRAPQ8TCY5 172 aa13.29□□□□□ -0.28
H3F3B-206ENST00000587560 C20orf144Q9BQM9 153 aa13.29□□□□□ -0.28
H3F3B-206ENST00000587560 C1QTNF4Q9BXJ3 329 aa13.29□□□□□ -0.28
H3F3B-206ENST00000587560 XCL2Q9UBD3 114 aa13.29□□□□□ -0.28
H3F3B-206ENST00000587560 C7orf71A4D174 169 aa13.28□□□□□ -0.28
H3F3B-206ENST00000587560 BTN1A1Q13410 526 aa13.28□□□□□ -0.28
H3F3B-206ENST00000587560 Q6ZQT7 251 aa13.28□□□□□ -0.28
H3F3B-206ENST00000587560 SBSPONQ8IVN8 264 aa13.28□□□□□ -0.28
H3F3B-206ENST00000587560 ZC2HC1AQ96GY0 325 aa13.28□□□□□ -0.28
H3F3B-206ENST00000587560 NDFIP1Q9BT67 221 aa13.28□□□□□ -0.28
H3F3B-206ENST00000587560 LY96Q9Y6Y9 160 aa13.28□□□□□ -0.28
H3F3B-206ENST00000587560 SFTA3P0C7M3 94 aa13.27□□□□□ -0.29
H3F3B-206ENST00000587560 FAM74A3Q4VXF1 159 aa13.27□□□□□ -0.29
H3F3B-206ENST00000587560 SMUG1Q53HV7 270 aa13.27□□□□□ -0.29
H3F3B-206ENST00000587560 DEFB121Q5J5C9 76 aa13.27□□□□□ -0.29
H3F3B-206ENST00000587560 ZNF705AQ6ZN79 300 aaPredicted RBP13.27□□□□□ -0.29
H3F3B-206ENST00000587560 SMIM7Q9BQ49 75 aa13.27□□□□□ -0.29
H3F3B-206ENST00000587560 TMEM218A2RU14 115 aa13.26□□□□□ -0.29
H3F3B-206ENST00000587560 PGPEP1LA6NFU8 196 aa13.26□□□□□ -0.29
H3F3B-206ENST00000587560 INSP01308 110 aa13.26□□□□□ -0.29
H3F3B-206ENST00000587560 GPX1P07203 203 aa13.26□□□□□ -0.29
H3F3B-206ENST00000587560 GNG4P50150 75 aa13.26□□□□□ -0.29
H3F3B-206ENST00000587560 ZNF674Q2M3X9 581 aa13.26□□□□□ -0.29
H3F3B-206ENST00000587560 OCC1Q8TAD7 63 aa13.26□□□□□ -0.29
H3F3B-206ENST00000587560 B9D2Q9BPU9 175 aa13.26□□□□□ -0.29
H3F3B-206ENST00000587560 TM2D3Q9BRN9 247 aa13.26□□□□□ -0.29
H3F3B-206ENST00000587560 ZNF727A8MUV8 499 aa13.25□□□□□ -0.29
H3F3B-206ENST00000587560 ADCYAP1P18509 176 aa13.25□□□□□ -0.29
H3F3B-206ENST00000587560 RNASE4P34096 147 aaKnown RBP13.25□□□□□ -0.29
H3F3B-206ENST00000587560 SOHLH1Q5JUK2 328 aa13.25□□□□□ -0.29
H3F3B-206ENST00000587560 NHLRC2Q8NBF2 726 aa13.25□□□□□ -0.29
H3F3B-206ENST00000587560 RNF183Q96D59 192 aa13.25□□□□□ -0.29
H3F3B-206ENST00000587560 LINC00467Q9BRT7 94 aa13.25□□□□□ -0.29
H3F3B-206ENST00000587560 TP53TG1Q9Y2A0 90 aa13.25□□□□□ -0.29
H3F3B-206ENST00000587560 DYNC2H1Q8NCM8 4307 aaKnown RBP13.24□□□□□ -0.29
H3F3B-206ENST00000587560 SACSQ9NZJ4 4579 aa13.24□□□□□ -0.29
H3F3B-206ENST00000587560 TRAV12-3A0A0B4J271 114 aa13.24□□□□□ -0.29
H3F3B-206ENST00000587560 J3KRW8 73 aa13.24□□□□□ -0.29
H3F3B-206ENST00000587560 K7EN84 100 aa13.24□□□□□ -0.29
H3F3B-206ENST00000587560 GCGP01275 180 aa13.24□□□□□ -0.29
H3F3B-206ENST00000587560 CEBPGP53567 150 aa13.24□□□□□ -0.29
H3F3B-206ENST00000587560 C11orf21Q9P2W6 132 aa13.24□□□□□ -0.29
H3F3B-206ENST00000587560 PFN1P07737 140 aaKnown RBP13.23□□□□□ -0.29
H3F3B-206ENST00000587560 DEFB135Q30KP9 77 aa13.23□□□□□ -0.29
H3F3B-206ENST00000587560 C10orf91Q5T1B1 145 aa13.23□□□□□ -0.29
H3F3B-206ENST00000587560 LINC01551Q86U37 167 aa13.23□□□□□ -0.29
H3F3B-206ENST00000587560 ZNF575Q86XF7 245 aa13.23□□□□□ -0.29
H3F3B-206ENST00000587560 TMEM256Q8N2U0 113 aa13.23□□□□□ -0.29
H3F3B-206ENST00000587560 OVOL2Q9BRP0 275 aa13.23□□□□□ -0.29
H3F3B-206ENST00000587560 X6R8D5 127 aa13.23□□□□□ -0.29
H3F3B-206ENST00000587560 TRAV21A0A0B4J279 112 aa13.22□□□□□ -0.29
H3F3B-206ENST00000587560 C19orf71A6NCJ1 209 aa13.22□□□□□ -0.29
H3F3B-206ENST00000587560 SH2D1AO60880 128 aa13.22□□□□□ -0.29
H3F3B-206ENST00000587560 TDRG1Q3Y452 100 aa13.22□□□□□ -0.29
H3F3B-206ENST00000587560 NEU1Q99519 415 aa13.22□□□□□ -0.29
H3F3B-206ENST00000587560 SDF2L1Q9HCN8 221 aa13.22□□□□□ -0.29
H3F3B-206ENST00000587560 NAT8Q9UHE5 227 aa13.22□□□□□ -0.29
H3F3B-206ENST00000587560 FABP5P3A8MUU1 101 aa13.21□□□□□ -0.29
H3F3B-206ENST00000587560 H7BYZ3 331 aa13.21□□□□□ -0.29
H3F3B-206ENST00000587560 NDUFA5Q16718 116 aa13.21□□□□□ -0.29
H3F3B-206ENST00000587560 TMEM241Q24JQ0 296 aa13.21□□□□□ -0.29
H3F3B-206ENST00000587560 FAM162BQ5T6X4 162 aa13.21□□□□□ -0.29
H3F3B-206ENST00000587560 SLC7A5P1Q8MH63 180 aa13.21□□□□□ -0.29
H3F3B-206ENST00000587560 RCHY1Q96PM5 261 aa13.21□□□□□ -0.29
H3F3B-206ENST00000587560 SPRY2O43597 315 aa13.2□□□□□ -0.3
H3F3B-206ENST00000587560 RPL23P62829 140 aaKnown RBP13.2□□□□□ -0.3
H3F3B-206ENST00000587560 PYGO2Q9BRQ0 406 aa13.2□□□□□ -0.3
H3F3B-206ENST00000587560 NIPSNAP3BQ9BS92 247 aa13.2□□□□□ -0.3
H3F3B-206ENST00000587560 SEC11CQ9BY50 192 aa13.2□□□□□ -0.3
H3F3B-206ENST00000587560 GOLT1BQ9Y3E0 138 aa13.2□□□□□ -0.3
H3F3B-206ENST00000587560 IGKV3D-20A0A0C4DH25 116 aa13.19□□□□□ -0.3
H3F3B-206ENST00000587560 OR5I1Q13606 314 aa13.19□□□□□ -0.3
H3F3B-206ENST00000587560 RETNQ9HD89 108 aa13.19□□□□□ -0.3
H3F3B-206ENST00000587560 BIN3Q9NQY0 253 aa13.19□□□□□ -0.3
H3F3B-206ENST00000587560 IGHV1OR15-1A0A075B7D0 117 aa13.18□□□□□ -0.3
H3F3B-206ENST00000587560 ANXA2RQ3ZCQ2 193 aa13.18□□□□□ -0.3
H3F3B-206ENST00000587560 LINC01559Q495D7 138 aa13.18□□□□□ -0.3
H3F3B-206ENST00000587560 FAM231DQ6ZW35 169 aa13.18□□□□□ -0.3
H3F3B-206ENST00000587560 ISOC2Q96AB3 205 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms