RNA–Protein interactions for RNA: ENST00000586407.1

LIG3-208, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 815 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-208ENST00000586407 PSMG3Q9BT73 122 aaPredicted RBP19.62■□□□□ 0.73
LIG3-208ENST00000586407 RTL8CO15255 209 aa19.61■□□□□ 0.73
LIG3-208ENST00000586407 LGALS9BQ3B8N2 356 aa19.61■□□□□ 0.73
LIG3-208ENST00000586407 Q6ZR54 194 aa19.61■□□□□ 0.73
LIG3-208ENST00000586407 GOLT1AQ6ZVE7 132 aa19.61■□□□□ 0.73
LIG3-208ENST00000586407 INO80EQ8NBZ0 244 aaPredicted RBP19.61■□□□□ 0.73
LIG3-208ENST00000586407 RAB24Q969Q5 203 aa19.61■□□□□ 0.73
LIG3-208ENST00000586407 TNFSF18Q9UNG2 199 aa19.61■□□□□ 0.73
LIG3-208ENST00000586407 G3V3Q6 166 aa19.6■□□□□ 0.73
LIG3-208ENST00000586407 TCL1AP56279 114 aa19.6■□□□□ 0.73
LIG3-208ENST00000586407 ASB13Q8WXK3 278 aa19.6■□□□□ 0.73
LIG3-208ENST00000586407 GNPNAT1Q96EK6 184 aaPredicted RBP19.6■□□□□ 0.73
LIG3-208ENST00000586407 MRPL16Q9NX20 251 aaKnown RBP19.6■□□□□ 0.73
LIG3-208ENST00000586407 MUC4Q99102 2169 aa19.59■□□□□ 0.73
LIG3-208ENST00000586407 TRGV2A0A075B6R0 118 aa19.59■□□□□ 0.73
LIG3-208ENST00000586407 TRAV8-1A0A0A6YYK1 113 aa19.59■□□□□ 0.73
LIG3-208ENST00000586407 TRBV7-9A0A0J9YWB2 115 aa19.59■□□□□ 0.73
LIG3-208ENST00000586407 SSX7Q7RTT5 188 aa19.59■□□□□ 0.73
LIG3-208ENST00000586407 ARPC5LQ9BPX5 153 aa19.59■□□□□ 0.73
LIG3-208ENST00000586407 STAG3L2P0CL84 134 aa19.58■□□□□ 0.72
LIG3-208ENST00000586407 STAG3L3P0CL85 134 aa19.58■□□□□ 0.72
LIG3-208ENST00000586407 LINC00588Q9Y4M8 146 aa19.58■□□□□ 0.72
LIG3-208ENST00000586407 SPINK4O60575 86 aa19.57■□□□□ 0.72
LIG3-208ENST00000586407 FAM74A1Q5RGS3 127 aa19.57■□□□□ 0.72
LIG3-208ENST00000586407 IBA57Q5T440 356 aaKnown RBP19.57■□□□□ 0.72
LIG3-208ENST00000586407 SGK494Q96LW2 274 aa19.57■□□□□ 0.72
LIG3-208ENST00000586407 F6UZH7 168 aa19.56■□□□□ 0.72
LIG3-208ENST00000586407 SMLR1H3BR10 107 aa19.56■□□□□ 0.72
LIG3-208ENST00000586407 GCHFRP30047 84 aa19.56■□□□□ 0.72
LIG3-208ENST00000586407 TVP23CQ96ET8 276 aa19.56■□□□□ 0.72
LIG3-208ENST00000586407 IGHV3-53P01767 116 aa19.55■□□□□ 0.72
LIG3-208ENST00000586407 ZNRF2Q8NHG8 242 aa19.55■□□□□ 0.72
LIG3-208ENST00000586407 MDFICQ9P1T7 246 aa19.55■□□□□ 0.72
LIG3-208ENST00000586407 NAGKQ9UJ70 344 aa19.55■□□□□ 0.72
LIG3-208ENST00000586407 SERF2P84101 59 aa19.54■□□□□ 0.72
LIG3-208ENST00000586407 Q6AWC8 147 aa19.54■□□□□ 0.72
LIG3-208ENST00000586407 LINC00336Q6ZUF6 198 aa19.54■□□□□ 0.72
LIG3-208ENST00000586407 LENEPQ9Y5L5 61 aa19.54■□□□□ 0.72
LIG3-208ENST00000586407 PRSS29PA6NIE9 313 aa19.53■□□□□ 0.72
LIG3-208ENST00000586407 CCL18P55774 89 aa19.53■□□□□ 0.72
LIG3-208ENST00000586407 ZNF415Q09FC8 603 aa19.53■□□□□ 0.72
LIG3-208ENST00000586407 TMEM183BQ1AE95 376 aa19.53■□□□□ 0.72
LIG3-208ENST00000586407 TMEM183AQ8IXX5 376 aa19.53■□□□□ 0.72
LIG3-208ENST00000586407 TMED6Q8WW62 240 aa19.53■□□□□ 0.72
LIG3-208ENST00000586407 ACTR3CQ9C0K3 210 aaPredicted RBP19.53■□□□□ 0.72
LIG3-208ENST00000586407 DNAH2Q9P225 4427 aa19.52■□□□□ 0.72
LIG3-208ENST00000586407 BORCS7-ASMTA0A0B4J1R7 106 aa19.52■□□□□ 0.72
LIG3-208ENST00000586407 ARPC5O15511 151 aa19.52■□□□□ 0.72
LIG3-208ENST00000586407 MBP02144 154 aa19.52■□□□□ 0.72
LIG3-208ENST00000586407 FAM3BP58499 235 aaPredicted RBP19.52■□□□□ 0.72
LIG3-208ENST00000586407 IQCF2Q8IXL9 164 aa19.52■□□□□ 0.72
LIG3-208ENST00000586407 VSIG2Q96IQ7 327 aa19.52■□□□□ 0.72
LIG3-208ENST00000586407 ST6GAL2Q96JF0 529 aa19.52■□□□□ 0.72
LIG3-208ENST00000586407 HECTD4Q9Y4D8 3996 aa19.51■□□□□ 0.71
LIG3-208ENST00000586407 ZNF726P1Q15940 193 aa19.51■□□□□ 0.71
LIG3-208ENST00000586407 SUN5Q8TC36 379 aa19.51■□□□□ 0.71
LIG3-208ENST00000586407 C18orf15Q96N68 181 aa19.51■□□□□ 0.71
LIG3-208ENST00000586407 DNAH17Q9UFH2 4485 aa19.51■□□□□ 0.71
LIG3-208ENST00000586407 A0A1B0GVY2 172 aa19.5■□□□□ 0.71
LIG3-208ENST00000586407 TREM1Q9NP99 234 aa19.5■□□□□ 0.71
LIG3-208ENST00000586407 GGTLC3B5MD39 225 aa19.49■□□□□ 0.71
LIG3-208ENST00000586407 CXorf1O96002 111 aa19.49■□□□□ 0.71
LIG3-208ENST00000586407 FAM159AQ6UWV7 190 aa19.49■□□□□ 0.71
LIG3-208ENST00000586407 C5orf17Q8NAS9 161 aa19.49■□□□□ 0.71
LIG3-208ENST00000586407 FAT2Q9NYQ8 4349 aa19.48■□□□□ 0.71
LIG3-208ENST00000586407 TCRAP04437 139 aa19.48■□□□□ 0.71
LIG3-208ENST00000586407 SUMO1P63165 101 aaKnown RBP19.48■□□□□ 0.71
LIG3-208ENST00000586407 ESRGQ1W209 222 aa19.48■□□□□ 0.71
LIG3-208ENST00000586407 ARL6IP6Q8N6S5 226 aa19.48■□□□□ 0.71
LIG3-208ENST00000586407 NBDYA0A0U1RRE5 68 aa19.47■□□□□ 0.71
LIG3-208ENST00000586407 GNRH2O43555 120 aa19.47■□□□□ 0.71
LIG3-208ENST00000586407 C8orf49Q96NF6 230 aa19.47■□□□□ 0.71
LIG3-208ENST00000586407 CYTL1Q9NRR1 136 aa19.47■□□□□ 0.71
LIG3-208ENST00000586407 A0A096LPF7 62 aa19.46■□□□□ 0.71
LIG3-208ENST00000586407 C1orf134Q5TEV5 83 aa19.46■□□□□ 0.71
LIG3-208ENST00000586407 TMEM167BQ9NRX6 74 aa19.46■□□□□ 0.71
LIG3-208ENST00000586407 TRGV11A0A075B6L2 103 aa19.45■□□□□ 0.7
LIG3-208ENST00000586407 H3BNG1 76 aa19.45■□□□□ 0.7
LIG3-208ENST00000586407 FGF8P55075 233 aaPredicted RBP19.45■□□□□ 0.7
LIG3-208ENST00000586407 SFTA3P0C7M3 94 aa19.44■□□□□ 0.7
LIG3-208ENST00000586407 ZNF80P51504 273 aaPredicted RBP19.44■□□□□ 0.7
LIG3-208ENST00000586407 PSG8Q9UQ74 426 aa19.44■□□□□ 0.7
LIG3-208ENST00000586407 TRAV21A0A0B4J279 112 aa19.43■□□□□ 0.7
LIG3-208ENST00000586407 CTXND1A0A1B0GTU2 59 aa19.43■□□□□ 0.7
LIG3-208ENST00000586407 IGLV2-11P01706 119 aa19.43■□□□□ 0.7
LIG3-208ENST00000586407 UBE2G2P60604 165 aa19.43■□□□□ 0.7
LIG3-208ENST00000586407 EPDR1Q9UM22 224 aa19.43■□□□□ 0.7
LIG3-208ENST00000586407 IGHV3-16A0A0C4DH30 117 aa19.42■□□□□ 0.7
LIG3-208ENST00000586407 PAX4O43316 350 aa19.42■□□□□ 0.7
LIG3-208ENST00000586407 TYMSP04818 313 aa19.42■□□□□ 0.7
LIG3-208ENST00000586407 FHL2Q14192 279 aa19.42■□□□□ 0.7
LIG3-208ENST00000586407 TDRG1Q3Y452 100 aa19.42■□□□□ 0.7
LIG3-208ENST00000586407 AKR1C8PQ5T2L2 129 aa19.42■□□□□ 0.7
LIG3-208ENST00000586407 PRNTQ86SH4 94 aa19.42■□□□□ 0.7
LIG3-208ENST00000586407 ZNF479Q96JC4 524 aa19.42■□□□□ 0.7
LIG3-208ENST00000586407 NDFIP1Q9BT67 221 aa19.42■□□□□ 0.7
LIG3-208ENST00000586407 SERTM2A0A1B0GWG4 89 aa19.41■□□□□ 0.7
LIG3-208ENST00000586407 SOHLH1Q5JUK2 328 aa19.41■□□□□ 0.7
LIG3-208ENST00000586407 Q9H8V8 135 aa19.41■□□□□ 0.7
LIG3-208ENST00000586407 C11orf21Q9P2W6 132 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms