RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 BLNKQ8WV28 456 aa6.33□□□□□ -1.4
ATG4D-202ENST00000585437 Q9H3A6 140 aa6.33□□□□□ -1.4
ATG4D-202ENST00000585437 EPDR1Q9UM22 224 aa6.33□□□□□ -1.4
ATG4D-202ENST00000585437 SERTM2A0A1B0GWG4 89 aa6.32□□□□□ -1.4
ATG4D-202ENST00000585437 PGPA6NDG6 321 aa6.32□□□□□ -1.4
ATG4D-202ENST00000585437 PGPEP1LA6NFU8 196 aa6.32□□□□□ -1.4
ATG4D-202ENST00000585437 K7EN84 100 aa6.32□□□□□ -1.4
ATG4D-202ENST00000585437 SPRY2O43597 315 aa6.32□□□□□ -1.4
ATG4D-202ENST00000585437 ZNF688P0C7X2 276 aa6.32□□□□□ -1.4
ATG4D-202ENST00000585437 MGST1P10620 155 aaKnown RBP6.32□□□□□ -1.4
ATG4D-202ENST00000585437 SNRPEP62304 92 aaKnown RBP6.32□□□□□ -1.4
ATG4D-202ENST00000585437 FABP9Q0Z7S8 132 aa6.32□□□□□ -1.4
ATG4D-202ENST00000585437 IBA57Q5T440 356 aaKnown RBP6.32□□□□□ -1.4
ATG4D-202ENST00000585437 LEMD1Q68G75 181 aa6.32□□□□□ -1.4
ATG4D-202ENST00000585437 FAM231DQ6ZW35 169 aa6.32□□□□□ -1.4
ATG4D-202ENST00000585437 BAGE2Q86Y30 109 aa6.32□□□□□ -1.4
ATG4D-202ENST00000585437 ARL6IP6Q8N6S5 226 aa6.32□□□□□ -1.4
ATG4D-202ENST00000585437 GPR82Q96P67 336 aa6.32□□□□□ -1.4
ATG4D-202ENST00000585437 CSTL1Q9H114 145 aa6.32□□□□□ -1.4
ATG4D-202ENST00000585437 KLF12Q9Y4X4 402 aa6.32□□□□□ -1.4
ATG4D-202ENST00000585437 TRBV19A0A075B6N1 114 aa6.31□□□□□ -1.4
ATG4D-202ENST00000585437 TRBV6-1A0A0K0K1D8 114 aa6.31□□□□□ -1.4
ATG4D-202ENST00000585437 FBLL1A6NHQ2 334 aaKnown RBP6.31□□□□□ -1.4
ATG4D-202ENST00000585437 ZNF98A6NK75 572 aa6.31□□□□□ -1.4
ATG4D-202ENST00000585437 HIST1H2BKO60814 126 aa6.31□□□□□ -1.4
ATG4D-202ENST00000585437 ZNF253O75346 499 aa6.31□□□□□ -1.4
ATG4D-202ENST00000585437 MT-ND6P03923 174 aa6.31□□□□□ -1.4
ATG4D-202ENST00000585437 TCRAP04437 139 aa6.31□□□□□ -1.4
ATG4D-202ENST00000585437 HIST1H2BJP06899 126 aa6.31□□□□□ -1.4
ATG4D-202ENST00000585437 GIG44P09565 113 aaPredicted RBP6.31□□□□□ -1.4
ATG4D-202ENST00000585437 SMIM6P0DI80 62 aa6.31□□□□□ -1.4
ATG4D-202ENST00000585437 IGLC2P0DOY2 106 aa6.31□□□□□ -1.4
ATG4D-202ENST00000585437 HIST1H2BOP23527 126 aa6.31□□□□□ -1.4
ATG4D-202ENST00000585437 HIST1H2BBP33778 126 aa6.31□□□□□ -1.4
ATG4D-202ENST00000585437 HIST1H2BDP58876 126 aa6.31□□□□□ -1.4
ATG4D-202ENST00000585437 HIST1H2BCP62807 126 aa6.31□□□□□ -1.4
ATG4D-202ENST00000585437 PSG9Q00887 426 aa6.31□□□□□ -1.4
ATG4D-202ENST00000585437 HIST2H2BEQ16778 126 aa6.31□□□□□ -1.4
ATG4D-202ENST00000585437 ACTL10Q5JWF8 245 aa6.31□□□□□ -1.4
ATG4D-202ENST00000585437 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.31□□□□□ -1.4
ATG4D-202ENST00000585437 HIST1H2BHQ93079 126 aa6.31□□□□□ -1.4
ATG4D-202ENST00000585437 C17orf77Q96MU5 243 aa6.31□□□□□ -1.4
ATG4D-202ENST00000585437 HIST1H2BNQ99877 126 aa6.31□□□□□ -1.4
ATG4D-202ENST00000585437 HIST1H2BMQ99879 126 aa6.31□□□□□ -1.4
ATG4D-202ENST00000585437 AAMDCQ9H7C9 122 aa6.31□□□□□ -1.4
ATG4D-202ENST00000585437 HYDINQ4G0P3 5121 aa6.3□□□□□ -1.4
ATG4D-202ENST00000585437 ALMS1Q8TCU4 4167 aa6.3□□□□□ -1.4
ATG4D-202ENST00000585437 IGLV2-8P01709 118 aa6.3□□□□□ -1.4
ATG4D-202ENST00000585437 TRGC1P0CF51 173 aa6.3□□□□□ -1.4
ATG4D-202ENST00000585437 HOXA5P20719 270 aa6.3□□□□□ -1.4
ATG4D-202ENST00000585437 CSN1S1P47710 185 aa6.3□□□□□ -1.4
ATG4D-202ENST00000585437 MEOX2P50222 304 aa6.3□□□□□ -1.4
ATG4D-202ENST00000585437 SNRPD3P62318 126 aaKnown RBP6.3□□□□□ -1.4
ATG4D-202ENST00000585437 SMUG1Q53HV7 270 aa6.3□□□□□ -1.4
ATG4D-202ENST00000585437 PSMG4Q5JS54 123 aa6.3□□□□□ -1.4
ATG4D-202ENST00000585437 WDR73Q6P4I2 378 aa6.3□□□□□ -1.4
ATG4D-202ENST00000585437 MORN3Q6PF18 240 aaPredicted RBP6.3□□□□□ -1.4
ATG4D-202ENST00000585437 RASL11AQ6T310 242 aa6.3□□□□□ -1.4
ATG4D-202ENST00000585437 STHQ8IWL8 128 aa6.3□□□□□ -1.4
ATG4D-202ENST00000585437 IL17DQ8TAD2 202 aa6.3□□□□□ -1.4
ATG4D-202ENST00000585437 FRZBQ92765 325 aa6.3□□□□□ -1.4
ATG4D-202ENST00000585437 C11orf68Q9H3H3 251 aaKnown RBP6.3□□□□□ -1.4
ATG4D-202ENST00000585437 ZNF586Q9NXT0 402 aa6.3□□□□□ -1.4
ATG4D-202ENST00000585437 V9GYV3 84 aa6.3□□□□□ -1.4
ATG4D-202ENST00000585437 A0A0J9YWU9 116 aa6.29□□□□□ -1.4
ATG4D-202ENST00000585437 KNCNA6PVL3 124 aa6.29□□□□□ -1.4
ATG4D-202ENST00000585437 ZNF705GA8MUZ8 300 aaPredicted RBP6.29□□□□□ -1.4
ATG4D-202ENST00000585437 GATCO43716 136 aaKnown RBP6.29□□□□□ -1.4
ATG4D-202ENST00000585437 CA1P00915 261 aaPredicted RBP6.29□□□□□ -1.4
ATG4D-202ENST00000585437 LTAP01374 205 aa6.29□□□□□ -1.4
ATG4D-202ENST00000585437 HLA-DRB4P13762 266 aa6.29□□□□□ -1.4
ATG4D-202ENST00000585437 S100A2P29034 98 aa6.29□□□□□ -1.4
ATG4D-202ENST00000585437 NDUFA6P56556 154 aa6.29□□□□□ -1.4
ATG4D-202ENST00000585437 GNG5P63218 68 aa6.29□□□□□ -1.4
ATG4D-202ENST00000585437 CT83Q5H943 113 aa6.29□□□□□ -1.4
ATG4D-202ENST00000585437 SAMD13Q5VXD3 122 aa6.29□□□□□ -1.4
ATG4D-202ENST00000585437 ZFAND6Q6FIF0 208 aa6.29□□□□□ -1.4
ATG4D-202ENST00000585437 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.29□□□□□ -1.4
ATG4D-202ENST00000585437 Q86TA4 180 aa6.29□□□□□ -1.4
ATG4D-202ENST00000585437 OR8I2Q8N0Y5 310 aa6.29□□□□□ -1.4
ATG4D-202ENST00000585437 TMEM75Q8N9X5 138 aa6.29□□□□□ -1.4
ATG4D-202ENST00000585437 CSNK1G2-AS1Q8NCQ2 148 aa6.29□□□□□ -1.4
ATG4D-202ENST00000585437 CLUHP3Q96NS8 147 aa6.29□□□□□ -1.4
ATG4D-202ENST00000585437 ZNF492Q9P255 531 aa6.29□□□□□ -1.4
ATG4D-202ENST00000585437 RPH3ALQ9UNE2 315 aa6.29□□□□□ -1.4
ATG4D-202ENST00000585437 TRAPPC1Q9Y5R8 145 aa6.29□□□□□ -1.4
ATG4D-202ENST00000585437 HLA-DRB4X5D2U9 266 aa6.29□□□□□ -1.4
ATG4D-202ENST00000585437 A8MTW9 85 aa6.28□□□□□ -1.4
ATG4D-202ENST00000585437 H3BMM0 161 aa6.28□□□□□ -1.4
ATG4D-202ENST00000585437 PHOX2AO14813 284 aa6.28□□□□□ -1.4
ATG4D-202ENST00000585437 MRPS12O15235 138 aaKnown RBP6.28□□□□□ -1.4
ATG4D-202ENST00000585437 OR5I1Q13606 314 aa6.28□□□□□ -1.4
ATG4D-202ENST00000585437 COA6Q5JTJ3 125 aaKnown RBP6.28□□□□□ -1.4
ATG4D-202ENST00000585437 GDF5OSQ5U4N7 250 aa6.28□□□□□ -1.4
ATG4D-202ENST00000585437 TMEM183AQ8IXX5 376 aa6.28□□□□□ -1.4
ATG4D-202ENST00000585437 LINC00518Q8N0U6 118 aa6.28□□□□□ -1.4
ATG4D-202ENST00000585437 Q8NAQ8 132 aa6.28□□□□□ -1.4
ATG4D-202ENST00000585437 OR4B1Q8NGF8 309 aa6.28□□□□□ -1.4
ATG4D-202ENST00000585437 DAZAP1Q96EP5 407 aaKnown RBP6.28□□□□□ -1.4
ATG4D-202ENST00000585437 GNB1LQ9BYB4 327 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms