RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 HMGB3O15347 200 aaKnown RBP11.91□□□□□ -0.5
CSNK1D-225ENST00000584913 SLC25A5P05141 298 aaKnown RBP11.91□□□□□ -0.5
CSNK1D-225ENST00000584913 SNRPCP09234 159 aaKnown RBP11.91□□□□□ -0.5
CSNK1D-225ENST00000584913 GFI1BQ5VTD9 330 aa11.91□□□□□ -0.5
CSNK1D-225ENST00000584913 C9orf47Q6ZRZ4 202 aa11.91□□□□□ -0.5
CSNK1D-225ENST00000584913 RNASE8Q8TDE3 154 aaKnown RBP11.91□□□□□ -0.5
CSNK1D-225ENST00000584913 FAM19A4Q96LR4 140 aa11.91□□□□□ -0.5
CSNK1D-225ENST00000584913 TXNDC17Q9BRA2 123 aa11.91□□□□□ -0.5
CSNK1D-225ENST00000584913 LINC00467Q9BRT7 94 aa11.91□□□□□ -0.5
CSNK1D-225ENST00000584913 PAXXQ9BUH6 204 aa11.91□□□□□ -0.5
CSNK1D-225ENST00000584913 TMEM167BQ9NRX6 74 aa11.91□□□□□ -0.5
CSNK1D-225ENST00000584913 EPPK1P58107 5090 aaKnown RBP11.91□□□□□ -0.5
CSNK1D-225ENST00000584913 RBAKDNA6NC62 111 aa11.9□□□□□ -0.5
CSNK1D-225ENST00000584913 ZNF705GA8MUZ8 300 aaPredicted RBP11.9□□□□□ -0.5
CSNK1D-225ENST00000584913 CRISP2P16562 243 aa11.9□□□□□ -0.5
CSNK1D-225ENST00000584913 GCHFRP30047 84 aa11.9□□□□□ -0.5
CSNK1D-225ENST00000584913 SRSF3P84103 164 aaKnown RBP11.9□□□□□ -0.5
CSNK1D-225ENST00000584913 FXYD5Q96DB9 178 aa11.9□□□□□ -0.5
CSNK1D-225ENST00000584913 PYGO2Q9BRQ0 406 aa11.9□□□□□ -0.5
CSNK1D-225ENST00000584913 VAX2Q9UIW0 290 aa11.9□□□□□ -0.5
CSNK1D-225ENST00000584913 TIMM8BQ9Y5J9 83 aaPredicted RBP11.9□□□□□ -0.5
CSNK1D-225ENST00000584913 TMEM218A2RU14 115 aa11.89□□□□□ -0.51
CSNK1D-225ENST00000584913 KLLNB2CW77 178 aa11.89□□□□□ -0.51
CSNK1D-225ENST00000584913 M0R3E3 92 aa11.89□□□□□ -0.51
CSNK1D-225ENST00000584913 CT45A10P0DMU9 189 aa11.89□□□□□ -0.51
CSNK1D-225ENST00000584913 ICAM4Q14773 271 aa11.89□□□□□ -0.51
CSNK1D-225ENST00000584913 IQCF2Q8IXL9 164 aa11.89□□□□□ -0.51
CSNK1D-225ENST00000584913 ARL6IP6Q8N6S5 226 aa11.89□□□□□ -0.51
CSNK1D-225ENST00000584913 C15orf53Q8NAA6 179 aa11.89□□□□□ -0.51
CSNK1D-225ENST00000584913 SUN5Q8TC36 379 aa11.89□□□□□ -0.51
CSNK1D-225ENST00000584913 OR7C2O60412 319 aa11.88□□□□□ -0.51
CSNK1D-225ENST00000584913 EIF3GO75821 320 aaKnown RBP eCLIP11.88□□□□□ -0.51
CSNK1D-225ENST00000584913 CCDC28AQ8IWP9 274 aa11.88□□□□□ -0.51
CSNK1D-225ENST00000584913 BLNKQ8WV28 456 aa11.88□□□□□ -0.51
CSNK1D-225ENST00000584913 TMPRSS5Q9H3S3 457 aa11.88□□□□□ -0.51
CSNK1D-225ENST00000584913 BIRC6Q9NR09 4857 aa11.88□□□□□ -0.51
CSNK1D-225ENST00000584913 CBY3A6NI87 242 aa11.87□□□□□ -0.51
CSNK1D-225ENST00000584913 SFTA3P0C7M3 94 aa11.87□□□□□ -0.51
CSNK1D-225ENST00000584913 AZU1P20160 251 aa11.87□□□□□ -0.51
CSNK1D-225ENST00000584913 UBE2L3P68036 154 aaKnown RBP11.87□□□□□ -0.51
CSNK1D-225ENST00000584913 MEF2BQ02080 365 aaPredicted RBP11.87□□□□□ -0.51
CSNK1D-225ENST00000584913 TMEM78Q5T7P6 136 aa11.87□□□□□ -0.51
CSNK1D-225ENST00000584913 EXOC3-AS1Q8N2X6 119 aa11.87□□□□□ -0.51
CSNK1D-225ENST00000584913 LINC00612Q8N6U2 182 aa11.87□□□□□ -0.51
CSNK1D-225ENST00000584913 ZNF503Q96F45 646 aa11.87□□□□□ -0.51
CSNK1D-225ENST00000584913 SEC11CQ9BY50 192 aa11.87□□□□□ -0.51
CSNK1D-225ENST00000584913 LENEPQ9Y5L5 61 aa11.87□□□□□ -0.51
CSNK1D-225ENST00000584913 C7orf71A4D174 169 aa11.86□□□□□ -0.51
CSNK1D-225ENST00000584913 ATP5G1P05496 136 aa11.86□□□□□ -0.51
CSNK1D-225ENST00000584913 CSN1S1P47710 185 aa11.86□□□□□ -0.51
CSNK1D-225ENST00000584913 ATP5G3P48201 142 aa11.86□□□□□ -0.51
CSNK1D-225ENST00000584913 RNF212Q495C1 297 aa11.86□□□□□ -0.51
CSNK1D-225ENST00000584913 C10orf91Q5T1B1 145 aa11.86□□□□□ -0.51
CSNK1D-225ENST00000584913 POM121L12Q8N7R1 296 aa11.86□□□□□ -0.51
CSNK1D-225ENST00000584913 RXFP4Q8TDU9 374 aa11.86□□□□□ -0.51
CSNK1D-225ENST00000584913 CARHSP1Q9Y2V2 147 aaKnown RBP11.86□□□□□ -0.51
CSNK1D-225ENST00000584913 TMEM250H0YL14 139 aa11.85□□□□□ -0.51
CSNK1D-225ENST00000584913 PAGE4O60829 102 aa11.85□□□□□ -0.51
CSNK1D-225ENST00000584913 SRP19P09132 144 aaKnown RBP11.85□□□□□ -0.51
CSNK1D-225ENST00000584913 FAM3BP58499 235 aaPredicted RBP11.85□□□□□ -0.51
CSNK1D-225ENST00000584913 ANXA2RQ3ZCQ2 193 aa11.85□□□□□ -0.51
CSNK1D-225ENST00000584913 AGPAT4-IT1Q9H0P7 198 aa11.85□□□□□ -0.51
CSNK1D-225ENST00000584913 ZNF492Q9P255 531 aa11.85□□□□□ -0.51
CSNK1D-225ENST00000584913 A0A1W2PRE2 83 aa11.84□□□□□ -0.51
CSNK1D-225ENST00000584913 C9JQL5 133 aa11.84□□□□□ -0.51
CSNK1D-225ENST00000584913 F8W036 122 aa11.84□□□□□ -0.51
CSNK1D-225ENST00000584913 PDE6DO43924 150 aa11.84□□□□□ -0.51
CSNK1D-225ENST00000584913 OR10J4P0C629 311 aa11.84□□□□□ -0.51
CSNK1D-225ENST00000584913 DAZ2Q13117 558 aaKnown RBP11.84□□□□□ -0.51
CSNK1D-225ENST00000584913 KIR3DS1Q14943 382 aa11.84□□□□□ -0.51
CSNK1D-225ENST00000584913 C18orf15Q96N68 181 aa11.84□□□□□ -0.51
CSNK1D-225ENST00000584913 NKX6-2Q9C056 277 aaPredicted RBP11.84□□□□□ -0.51
CSNK1D-225ENST00000584913 Q9H3A6 140 aa11.84□□□□□ -0.51
CSNK1D-225ENST00000584913 TRAV12-3A0A0B4J271 114 aa11.83□□□□□ -0.52
CSNK1D-225ENST00000584913 FAM74A7A6NL05 159 aa11.83□□□□□ -0.52
CSNK1D-225ENST00000584913 SNURFLB1AK76 121 aa11.83□□□□□ -0.52
CSNK1D-225ENST00000584913 F6UZH7 168 aa11.83□□□□□ -0.52
CSNK1D-225ENST00000584913 ZNF324O75467 553 aaPredicted RBP11.83□□□□□ -0.52
CSNK1D-225ENST00000584913 ADCYAP1P18509 176 aa11.83□□□□□ -0.52
CSNK1D-225ENST00000584913 ZNF138P52744 262 aa11.83□□□□□ -0.52
CSNK1D-225ENST00000584913 IBA57Q5T440 356 aaKnown RBP11.83□□□□□ -0.52
CSNK1D-225ENST00000584913 OTORQ9NRC9 128 aa11.83□□□□□ -0.52
CSNK1D-225ENST00000584913 PRM2P04554 102 aa11.82□□□□□ -0.52
CSNK1D-225ENST00000584913 DEFB130BP0DP73 79 aa11.82□□□□□ -0.52
CSNK1D-225ENST00000584913 DEFB130AP0DP74 79 aa11.82□□□□□ -0.52
CSNK1D-225ENST00000584913 ERCC8Q13216 396 aa11.82□□□□□ -0.52
CSNK1D-225ENST00000584913 SOHLH1Q5JUK2 328 aa11.82□□□□□ -0.52
CSNK1D-225ENST00000584913 TMEM88Q6PEY1 159 aa11.82□□□□□ -0.52
CSNK1D-225ENST00000584913 ZFAND2AQ8N6M9 145 aa11.82□□□□□ -0.52
CSNK1D-225ENST00000584913 TCEAL7Q9BRU2 100 aa11.82□□□□□ -0.52
CSNK1D-225ENST00000584913 NOP10Q9NPE3 64 aaKnown RBP11.82□□□□□ -0.52
CSNK1D-225ENST00000584913 IGKV2-40A0A087WW87 121 aaPredicted RBP11.81□□□□□ -0.52
CSNK1D-225ENST00000584913 SERTM2A0A1B0GWG4 89 aa11.81□□□□□ -0.52
CSNK1D-225ENST00000584913 IGKV2D-40P01614 121 aaPredicted RBP11.81□□□□□ -0.52
CSNK1D-225ENST00000584913 GPX1P07203 203 aa11.81□□□□□ -0.52
CSNK1D-225ENST00000584913 HTN1P15515 57 aa11.81□□□□□ -0.52
CSNK1D-225ENST00000584913 HTN3P15516 51 aa11.81□□□□□ -0.52
CSNK1D-225ENST00000584913 UBE2G2P60604 165 aa11.81□□□□□ -0.52
CSNK1D-225ENST00000584913 RANP62826 216 aaKnown RBP11.81□□□□□ -0.52
CSNK1D-225ENST00000584913 CST9LP1Q5W188 147 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms